data_6AG4 # _model_server_result.job_id Dtlm-JvmUOXldTXpUXEAnw _model_server_result.datetime_utc '2025-01-12 02:54:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ag4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AG4 # _exptl.entry_id 6AG4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AG4 _cell.length_a 42.335 _cell.length_b 53.148 _cell.length_c 74.505 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AG4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 6AG4 _atom_sites.fract_transf_matrix[1][1] 0.023621 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013422 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACO A 1 201 1 ACO ACO . C 3 SO4 A 1 202 1 SO4 SO4 . D 4 CA A 1 203 1 CA CA . E 5 HOH A 1 301 36 HOH HOH . E 5 HOH A 2 302 34 HOH HOH . E 5 HOH A 3 303 56 HOH HOH . E 5 HOH A 4 304 43 HOH HOH . E 5 HOH A 5 305 33 HOH HOH . E 5 HOH A 6 306 25 HOH HOH . E 5 HOH A 7 307 49 HOH HOH . E 5 HOH A 8 308 1 HOH HOH . E 5 HOH A 9 309 44 HOH HOH . E 5 HOH A 10 310 9 HOH HOH . E 5 HOH A 11 311 31 HOH HOH . E 5 HOH A 12 312 5 HOH HOH . E 5 HOH A 13 313 60 HOH HOH . E 5 HOH A 14 314 41 HOH HOH . E 5 HOH A 15 315 7 HOH HOH . E 5 HOH A 16 316 4 HOH HOH . E 5 HOH A 17 317 8 HOH HOH . E 5 HOH A 18 318 59 HOH HOH . E 5 HOH A 19 319 10 HOH HOH . E 5 HOH A 20 320 51 HOH HOH . E 5 HOH A 21 321 57 HOH HOH . E 5 HOH A 22 322 38 HOH HOH . E 5 HOH A 23 323 18 HOH HOH . E 5 HOH A 24 324 27 HOH HOH . E 5 HOH A 25 325 40 HOH HOH . E 5 HOH A 26 326 15 HOH HOH . E 5 HOH A 27 327 52 HOH HOH . E 5 HOH A 28 328 28 HOH HOH . E 5 HOH A 29 329 19 HOH HOH . E 5 HOH A 30 330 55 HOH HOH . E 5 HOH A 31 331 11 HOH HOH . E 5 HOH A 32 332 13 HOH HOH . E 5 HOH A 33 333 58 HOH HOH . E 5 HOH A 34 334 62 HOH HOH . E 5 HOH A 35 335 21 HOH HOH . E 5 HOH A 36 336 45 HOH HOH . E 5 HOH A 37 337 12 HOH HOH . E 5 HOH A 38 338 30 HOH HOH . E 5 HOH A 39 339 14 HOH HOH . E 5 HOH A 40 340 26 HOH HOH . E 5 HOH A 41 341 37 HOH HOH . E 5 HOH A 42 342 65 HOH HOH . E 5 HOH A 43 343 16 HOH HOH . E 5 HOH A 44 344 48 HOH HOH . E 5 HOH A 45 345 3 HOH HOH . E 5 HOH A 46 346 24 HOH HOH . E 5 HOH A 47 347 46 HOH HOH . E 5 HOH A 48 348 63 HOH HOH . E 5 HOH A 49 349 53 HOH HOH . E 5 HOH A 50 350 61 HOH HOH . E 5 HOH A 51 351 64 HOH HOH . E 5 HOH A 52 352 6 HOH HOH . E 5 HOH A 53 353 17 HOH HOH . E 5 HOH A 54 354 47 HOH HOH . E 5 HOH A 55 355 32 HOH HOH . E 5 HOH A 56 356 42 HOH HOH . E 5 HOH A 57 357 39 HOH HOH . E 5 HOH A 58 358 2 HOH HOH . E 5 HOH A 59 359 68 HOH HOH . E 5 HOH A 60 360 22 HOH HOH . E 5 HOH A 61 361 29 HOH HOH . E 5 HOH A 62 362 20 HOH HOH . E 5 HOH A 63 363 50 HOH HOH . E 5 HOH A 64 364 66 HOH HOH . E 5 HOH A 65 365 54 HOH HOH . E 5 HOH A 66 366 23 HOH HOH . E 5 HOH A 67 367 35 HOH HOH . E 5 HOH A 68 368 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . B 2 -27.926 -7.083 14.578 1 38.29 ? N1A ACO 201 A 1 HETATM 2 C C2A ACO . . . B 2 -28.835 -7.375 13.588 1 36.64 ? C2A ACO 201 A 1 HETATM 3 N N3A ACO . . . B 2 -28.776 -6.749 12.385 1 37.44 ? N3A ACO 201 A 1 HETATM 4 C C4A ACO . . . B 2 -27.799 -5.802 12.162 1 36.51 ? C4A ACO 201 A 1 HETATM 5 C C5A ACO . . . B 2 -26.916 -5.501 13.135 1 33.68 ? C5A ACO 201 A 1 HETATM 6 C C6A ACO . . . B 2 -26.975 -6.151 14.367 1 38.42 ? C6A ACO 201 A 1 HETATM 7 N N6A ACO . . . B 2 -26.253 -6.085 15.529 1 34.94 ? N6A ACO 201 A 1 HETATM 8 N N7A ACO . . . B 2 -26.077 -4.547 12.659 1 33.56 ? N7A ACO 201 A 1 HETATM 9 C C8A ACO . . . B 2 -26.444 -4.26 11.396 1 38.69 ? C8A ACO 201 A 1 HETATM 10 N N9A ACO . . . B 2 -27.509 -5.039 11.08 1 41.52 ? N9A ACO 201 A 1 HETATM 11 C C1B ACO . . . B 2 -28.185 -4.985 9.831 1 37.61 ? C1B ACO 201 A 1 HETATM 12 C C2B ACO . . . B 2 -29.426 -4.535 10.052 1 43.85 ? C2B ACO 201 A 1 HETATM 13 O O2B ACO . . . B 2 -30.394 -5.151 9.139 1 43.62 ? O2B ACO 201 A 1 HETATM 14 C C3B ACO . . . B 2 -29.349 -3.025 9.786 1 53 ? C3B ACO 201 A 1 HETATM 15 O O3B ACO . . . B 2 -30.551 -2.526 9.409 1 55.35 ? O3B ACO 201 A 1 HETATM 16 P P3B ACO . . . B 2 -31.42 -1.731 10.503 1 62.76 ? P3B ACO 201 A 1 HETATM 17 O O7A ACO . . . B 2 -32.018 -0.557 9.869 1 69.89 ? O7A ACO 201 A 1 HETATM 18 O O8A ACO . . . B 2 -32.51 -2.651 11.05 1 61.45 ? O8A ACO 201 A 1 HETATM 19 O O9A ACO . . . B 2 -30.524 -1.279 11.669 1 58.91 ? O9A ACO 201 A 1 HETATM 20 C C4B ACO . . . B 2 -28.296 -2.934 8.626 1 46.78 ? C4B ACO 201 A 1 HETATM 21 O O4B ACO . . . B 2 -27.441 -3.885 8.904 1 45.85 ? O4B ACO 201 A 1 HETATM 22 C C5B ACO . . . B 2 -27.629 -1.579 8.601 1 44.03 ? C5B ACO 201 A 1 HETATM 23 O O5B ACO . . . B 2 -27.015 -1.324 9.843 1 51.76 ? O5B ACO 201 A 1 HETATM 24 P P1A ACO . . . B 2 -25.873 -0.263 10.001 1 34.75 ? P1A ACO 201 A 1 HETATM 25 O O1A ACO . . . B 2 -26.336 0.793 11.001 1 27.56 ? O1A ACO 201 A 1 HETATM 26 O O2A ACO . . . B 2 -25.514 0.405 8.657 1 31.06 ? O2A ACO 201 A 1 HETATM 27 O O3A ACO . . . B 2 -24.595 -1.04 10.545 1 51.26 ? O3A ACO 201 A 1 HETATM 28 P P2A ACO . . . B 2 -23.605 -0.473 11.681 1 32.8 ? P2A ACO 201 A 1 HETATM 29 O O4A ACO . . . B 2 -23.309 0.978 11.408 1 35.68 ? O4A ACO 201 A 1 HETATM 30 O O5A ACO . . . B 2 -24.224 -0.671 13.024 1 29.12 ? O5A ACO 201 A 1 HETATM 31 O O6A ACO . . . B 2 -22.25 -1.369 11.587 1 45.03 ? O6A ACO 201 A 1 HETATM 32 C CBP ACO . . . B 2 -20.998 -3.448 11.52 1 30.94 ? CBP ACO 201 A 1 HETATM 33 C CCP ACO . . . B 2 -22.366 -2.709 11.157 1 38.29 ? CCP ACO 201 A 1 HETATM 34 C CDP ACO . . . B 2 -19.835 -2.891 10.576 1 26.43 ? CDP ACO 201 A 1 HETATM 35 C CEP ACO . . . B 2 -21.208 -4.939 11.235 1 30.39 ? CEP ACO 201 A 1 HETATM 36 C CAP ACO . . . B 2 -20.743 -3.179 12.977 1 33.5 ? CAP ACO 201 A 1 HETATM 37 O OAP ACO . . . B 2 -21.618 -3.982 13.777 1 35.73 ? OAP ACO 201 A 1 HETATM 38 C C9P ACO . . . B 2 -19.312 -3.473 13.444 1 31.27 ? C9P ACO 201 A 1 HETATM 39 O O9P ACO . . . B 2 -18.439 -2.621 13.347 1 30.74 ? O9P ACO 201 A 1 HETATM 40 N N8P ACO . . . B 2 -19.048 -4.714 14.012 1 31.63 ? N8P ACO 201 A 1 HETATM 41 C C7P ACO . . . B 2 -17.742 -5.095 14.49 1 26.82 ? C7P ACO 201 A 1 HETATM 42 C C6P ACO . . . B 2 -16.667 -4.998 13.343 1 30.54 ? C6P ACO 201 A 1 HETATM 43 C C5P ACO . . . B 2 -17.065 -5.945 12.215 1 34.17 ? C5P ACO 201 A 1 HETATM 44 O O5P ACO . . . B 2 -17.418 -7.106 12.504 1 35.29 ? O5P ACO 201 A 1 HETATM 45 N N4P ACO . . . B 2 -17.033 -5.495 10.823 1 35.34 ? N4P ACO 201 A 1 HETATM 46 C C3P ACO . . . B 2 -17.398 -6.389 9.73 1 33.01 ? C3P ACO 201 A 1 HETATM 47 C C2P ACO . . . B 2 -16.268 -7.445 9.516 1 54.47 ? C2P ACO 201 A 1 HETATM 48 S S1P ACO . . . B 2 -16.398 -8.204 7.924 1 65.32 ? S1P ACO 201 A 1 HETATM 49 C C ACO . . . B 2 -15.083 -7.57 6.916 1 62.77 ? C ACO 201 A 1 HETATM 50 O O ACO . . . B 2 -15.27 -7.339 5.747 1 59.1 ? O ACO 201 A 1 HETATM 51 C CH3 ACO . . . B 2 -13.822 -7.046 7.578 1 56.59 ? CH3 ACO 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 51 #