data_6AG5 # _model_server_result.job_id RA8G8TckRZu1uHtHp4HwGA _model_server_result.datetime_utc '2024-12-27 02:29:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ag5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AG5 # _exptl.entry_id 6AG5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AG5 _cell.length_a 41.217 _cell.length_b 52.926 _cell.length_c 73.576 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AG5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 6AG5 _atom_sites.fract_transf_matrix[1][1] 0.024262 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACO A 1 201 400 ACO ACO . C 3 CA A 1 202 1 CA CA . D 4 HOH A 1 301 58 HOH HOH . D 4 HOH A 2 302 53 HOH HOH . D 4 HOH A 3 303 98 HOH HOH . D 4 HOH A 4 304 41 HOH HOH . D 4 HOH A 5 305 11 HOH HOH . D 4 HOH A 6 306 90 HOH HOH . D 4 HOH A 7 307 42 HOH HOH . D 4 HOH A 8 308 69 HOH HOH . D 4 HOH A 9 309 44 HOH HOH . D 4 HOH A 10 310 88 HOH HOH . D 4 HOH A 11 311 62 HOH HOH . D 4 HOH A 12 312 10 HOH HOH . D 4 HOH A 13 313 39 HOH HOH . D 4 HOH A 14 314 37 HOH HOH . D 4 HOH A 15 315 59 HOH HOH . D 4 HOH A 16 316 40 HOH HOH . D 4 HOH A 17 317 92 HOH HOH . D 4 HOH A 18 318 15 HOH HOH . D 4 HOH A 19 319 86 HOH HOH . D 4 HOH A 20 320 7 HOH HOH . D 4 HOH A 21 321 23 HOH HOH . D 4 HOH A 22 322 89 HOH HOH . D 4 HOH A 23 323 9 HOH HOH . D 4 HOH A 24 324 2 HOH HOH . D 4 HOH A 25 325 28 HOH HOH . D 4 HOH A 26 326 19 HOH HOH . D 4 HOH A 27 327 6 HOH HOH . D 4 HOH A 28 328 1 HOH HOH . D 4 HOH A 29 329 38 HOH HOH . D 4 HOH A 30 330 27 HOH HOH . D 4 HOH A 31 331 57 HOH HOH . D 4 HOH A 32 332 54 HOH HOH . D 4 HOH A 33 333 79 HOH HOH . D 4 HOH A 34 334 31 HOH HOH . D 4 HOH A 35 335 65 HOH HOH . D 4 HOH A 36 336 26 HOH HOH . D 4 HOH A 37 337 80 HOH HOH . D 4 HOH A 38 338 64 HOH HOH . D 4 HOH A 39 339 8 HOH HOH . D 4 HOH A 40 340 20 HOH HOH . D 4 HOH A 41 341 12 HOH HOH . D 4 HOH A 42 342 3 HOH HOH . D 4 HOH A 43 343 82 HOH HOH . D 4 HOH A 44 344 34 HOH HOH . D 4 HOH A 45 345 47 HOH HOH . D 4 HOH A 46 346 52 HOH HOH . D 4 HOH A 47 347 36 HOH HOH . D 4 HOH A 48 348 5 HOH HOH . D 4 HOH A 49 349 35 HOH HOH . D 4 HOH A 50 350 60 HOH HOH . D 4 HOH A 51 351 95 HOH HOH . D 4 HOH A 52 352 97 HOH HOH . D 4 HOH A 53 353 25 HOH HOH . D 4 HOH A 54 354 21 HOH HOH . D 4 HOH A 55 355 75 HOH HOH . D 4 HOH A 56 356 43 HOH HOH . D 4 HOH A 57 357 13 HOH HOH . D 4 HOH A 58 358 29 HOH HOH . D 4 HOH A 59 359 4 HOH HOH . D 4 HOH A 60 360 48 HOH HOH . D 4 HOH A 61 361 72 HOH HOH . D 4 HOH A 62 362 17 HOH HOH . D 4 HOH A 63 363 68 HOH HOH . D 4 HOH A 64 364 73 HOH HOH . D 4 HOH A 65 365 14 HOH HOH . D 4 HOH A 66 366 67 HOH HOH . D 4 HOH A 67 367 33 HOH HOH . D 4 HOH A 68 368 91 HOH HOH . D 4 HOH A 69 369 56 HOH HOH . D 4 HOH A 70 370 61 HOH HOH . D 4 HOH A 71 371 55 HOH HOH . D 4 HOH A 72 372 51 HOH HOH . D 4 HOH A 73 373 76 HOH HOH . D 4 HOH A 74 374 49 HOH HOH . D 4 HOH A 75 375 94 HOH HOH . D 4 HOH A 76 376 83 HOH HOH . D 4 HOH A 77 377 81 HOH HOH . D 4 HOH A 78 378 87 HOH HOH . D 4 HOH A 79 379 71 HOH HOH . D 4 HOH A 80 380 50 HOH HOH . D 4 HOH A 81 381 99 HOH HOH . D 4 HOH A 82 382 93 HOH HOH . D 4 HOH A 83 383 30 HOH HOH . D 4 HOH A 84 384 84 HOH HOH . D 4 HOH A 85 385 77 HOH HOH . D 4 HOH A 86 386 78 HOH HOH . D 4 HOH A 87 387 70 HOH HOH . D 4 HOH A 88 388 18 HOH HOH . D 4 HOH A 89 389 100 HOH HOH . D 4 HOH A 90 390 66 HOH HOH . D 4 HOH A 91 391 85 HOH HOH . D 4 HOH A 92 392 16 HOH HOH . D 4 HOH A 93 393 22 HOH HOH . D 4 HOH A 94 394 46 HOH HOH . D 4 HOH A 95 395 63 HOH HOH . D 4 HOH A 96 396 24 HOH HOH . D 4 HOH A 97 397 32 HOH HOH . D 4 HOH A 98 398 74 HOH HOH . D 4 HOH A 99 399 45 HOH HOH . D 4 HOH A 100 400 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . B 2 -27.391 6.992 -14.904 1 30.8 ? N1A ACO 201 A 1 HETATM 2 C C2A ACO . . . B 2 -28.303 7.341 -13.941 1 32.42 ? C2A ACO 201 A 1 HETATM 3 N N3A ACO . . . B 2 -28.282 6.738 -12.725 1 37.25 ? N3A ACO 201 A 1 HETATM 4 C C4A ACO . . . B 2 -27.34 5.763 -12.447 1 32.86 ? C4A ACO 201 A 1 HETATM 5 C C5A ACO . . . B 2 -26.453 5.417 -13.399 1 32.02 ? C5A ACO 201 A 1 HETATM 6 C C6A ACO . . . B 2 -26.475 6.039 -14.646 1 31.79 ? C6A ACO 201 A 1 HETATM 7 N N6A ACO . . . B 2 -25.74 5.935 -15.795 1 31.56 ? N6A ACO 201 A 1 HETATM 8 N N7A ACO . . . B 2 -25.654 4.452 -12.88 1 35.03 ? N7A ACO 201 A 1 HETATM 9 C C8A ACO . . . B 2 -26.056 4.208 -11.613 1 30.91 ? C8A ACO 201 A 1 HETATM 10 N N9A ACO . . . B 2 -27.095 5.02 -11.332 1 27.41 ? N9A ACO 201 A 1 HETATM 11 C C1B ACO . . . B 2 -27.798 5.018 -10.084 1 33.11 ? C1B ACO 201 A 1 HETATM 12 C C2B ACO . . . B 2 -29.062 4.599 -10.272 1 36.8 ? C2B ACO 201 A 1 HETATM 13 O O2B ACO . . . B 2 -29.996 5.266 -9.364 1 38.09 ? O2B ACO 201 A 1 HETATM 14 C C3B ACO . . . B 2 -29.032 3.095 -9.954 1 42.95 ? C3B ACO 201 A 1 HETATM 15 O O3B ACO . . . B 2 -30.248 2.597 -9.602 1 46.34 ? O3B ACO 201 A 1 HETATM 16 P P3B ACO . . . B 2 -31.119 1.843 -10.739 1 47.29 ? P3B ACO 201 A 1 HETATM 17 O O7A ACO . . . B 2 -32.016 0.882 -10.097 1 46.11 ? O7A ACO 201 A 1 HETATM 18 O O8A ACO . . . B 2 -31.958 2.861 -11.518 1 51.27 ? O8A ACO 201 A 1 HETATM 19 O O9A ACO . . . B 2 -30.183 1.139 -11.741 1 38.66 ? O9A ACO 201 A 1 HETATM 20 C C4B ACO . . . B 2 -27.976 3.018 -8.793 1 32.43 ? C4B ACO 201 A 1 HETATM 21 O O4B ACO . . . B 2 -27.1 3.961 -9.071 1 32.79 ? O4B ACO 201 A 1 HETATM 22 C C5B ACO . . . B 2 -27.331 1.657 -8.777 1 28.42 ? C5B ACO 201 A 1 HETATM 23 O O5B ACO . . . B 2 -26.378 1.576 -9.812 1 30.62 ? O5B ACO 201 A 1 HETATM 24 P P1A ACO . . . B 2 -25.545 0.272 -10.02 1 25.44 ? P1A ACO 201 A 1 HETATM 25 O O1A ACO . . . B 2 -26.107 -0.561 -11.185 1 26.34 ? O1A ACO 201 A 1 HETATM 26 O O2A ACO . . . B 2 -25.599 -0.567 -8.731 1 26.55 ? O2A ACO 201 A 1 HETATM 27 O O3A ACO . . . B 2 -24.058 0.775 -10.349 1 37.9 ? O3A ACO 201 A 1 HETATM 28 P P2A ACO . . . B 2 -23.183 0.312 -11.633 1 31.78 ? P2A ACO 201 A 1 HETATM 29 O O4A ACO . . . B 2 -22.897 -1.162 -11.406 1 25.85 ? O4A ACO 201 A 1 HETATM 30 O O5A ACO . . . B 2 -23.935 0.535 -12.906 1 27.64 ? O5A ACO 201 A 1 HETATM 31 O O6A ACO . . . B 2 -21.809 1.199 -11.72 1 38.96 ? O6A ACO 201 A 1 HETATM 32 C CBP ACO . . . B 2 -20.487 3.272 -11.614 1 32.41 ? CBP ACO 201 A 1 HETATM 33 C CCP ACO . . . B 2 -21.84 2.517 -11.214 1 35.47 ? CCP ACO 201 A 1 HETATM 34 C CDP ACO . . . B 2 -19.292 2.902 -10.615 1 13.97 ? CDP ACO 201 A 1 HETATM 35 C CEP ACO . . . B 2 -20.77 4.78 -11.551 1 35.53 ? CEP ACO 201 A 1 HETATM 36 C CAP ACO . . . B 2 -20.172 2.888 -13.016 1 27.36 ? CAP ACO 201 A 1 HETATM 37 O OAP ACO . . . B 2 -21.093 3.599 -13.84 1 26.32 ? OAP ACO 201 A 1 HETATM 38 C C9P ACO . . . B 2 -18.722 3.224 -13.415 1 27.03 ? C9P ACO 201 A 1 HETATM 39 O O9P ACO . . . B 2 -17.84 2.373 -13.29 1 31.06 ? O9P ACO 201 A 1 HETATM 40 N N8P ACO . . . B 2 -18.424 4.482 -13.925 1 19.74 ? N8P ACO 201 A 1 HETATM 41 C C7P ACO . . . B 2 -17.068 4.834 -14.29 1 19.27 ? C7P ACO 201 A 1 HETATM 42 C C6P ACO . . . B 2 -16.123 4.803 -13.014 1 27.11 ? C6P ACO 201 A 1 HETATM 43 C C5P ACO . . . B 2 -16.577 5.762 -11.91 1 31.86 ? C5P ACO 201 A 1 HETATM 44 O O5P ACO . . . B 2 -17.211 6.805 -12.177 1 27.67 ? O5P ACO 201 A 1 HETATM 45 N N4P ACO . . . B 2 -16.257 5.47 -10.516 1 35.66 ? N4P ACO 201 A 1 HETATM 46 C C3P ACO . . . B 2 -16.68 6.377 -9.457 1 37.07 ? C3P ACO 201 A 1 HETATM 47 C C2P ACO . . . B 2 -15.719 7.603 -9.402 1 19.77 ? C2P ACO 201 A 1 HETATM 48 S S1P ACO . . . B 2 -15.791 8.336 -7.787 1 37.07 ? S1P ACO 201 A 1 HETATM 49 C C ACO . . . B 2 -14.65 7.508 -6.688 1 31.79 ? C ACO 201 A 1 HETATM 50 O O ACO . . . B 2 -13.596 7.048 -7.075 1 31.2 ? O ACO 201 A 1 HETATM 51 C CH3 ACO . . . B 2 -15.171 7 -5.364 1 22.7 ? CH3 ACO 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 51 #