data_6AHE # _model_server_result.job_id 1zvW1vlhQLkhKY_8ovbkfA _model_server_result.datetime_utc '2024-10-30 15:15:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ahe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":300}' # _entry.id 6AHE # _exptl.entry_id 6AHE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AHE _cell.length_a 79.529 _cell.length_b 89.573 _cell.length_c 159.473 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AHE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 291 n n PA O2A NAD sing 292 n n PA O5B NAD sing 293 n n PA O3 NAD sing 294 n n O2A HOA2 NAD sing 295 n n O5B C5B NAD sing 296 n n C5B C4B NAD sing 297 n n C5B H51A NAD sing 298 n n C5B H52A NAD sing 299 n n C4B O4B NAD sing 300 n n C4B C3B NAD sing 301 n n C4B H4B NAD sing 302 n n O4B C1B NAD sing 303 n n C3B O3B NAD sing 304 n n C3B C2B NAD sing 305 n n C3B H3B NAD sing 306 n n O3B HO3A NAD sing 307 n n C2B O2B NAD sing 308 n n C2B C1B NAD sing 309 n n C2B H2B NAD sing 310 n n O2B HO2A NAD sing 311 n n C1B N9A NAD sing 312 n n C1B H1B NAD sing 313 n n N9A C8A NAD sing 314 n y N9A C4A NAD sing 315 n y C8A N7A NAD doub 316 n y C8A H8A NAD sing 317 n n N7A C5A NAD sing 318 n y C5A C6A NAD sing 319 n y C5A C4A NAD doub 320 n y C6A N6A NAD sing 321 n n C6A N1A NAD doub 322 n y N6A H61A NAD sing 323 n n N6A H62A NAD sing 324 n n N1A C2A NAD sing 325 n y C2A N3A NAD doub 326 n y C2A H2A NAD sing 327 n n N3A C4A NAD sing 328 n y O3 PN NAD sing 329 n n PN O1N NAD doub 330 n n PN O2N NAD sing 331 n n PN O5D NAD sing 332 n n O5D C5D NAD sing 333 n n C5D C4D NAD sing 334 n n C5D H51N NAD sing 335 n n C5D H52N NAD sing 336 n n C4D O4D NAD sing 337 n n C4D C3D NAD sing 338 n n C4D H4D NAD sing 339 n n O4D C1D NAD sing 340 n n C3D O3D NAD sing 341 n n C3D C2D NAD sing 342 n n C3D H3D NAD sing 343 n n O3D HO3N NAD sing 344 n n C2D O2D NAD sing 345 n n C2D C1D NAD sing 346 n n C2D H2D NAD sing 347 n n O2D HO2N NAD sing 348 n n C1D N1N NAD sing 349 n n C1D H1D NAD sing 350 n n N1N C2N NAD sing 351 n y N1N C6N NAD doub 352 n y C2N C3N NAD doub 353 n y C2N H2N NAD sing 354 n n C3N C7N NAD sing 355 n n C3N C4N NAD sing 356 n y C7N O7N NAD doub 357 n n C7N N7N NAD sing 358 n n N7N H71N NAD sing 359 n n N7N H72N NAD sing 360 n n C4N C5N NAD doub 361 n y C4N H4N NAD sing 362 n n C5N C6N NAD sing 363 n y C5N H5N NAD sing 364 n n C6N H6N NAD sing 365 n n # _atom_sites.entry_id 6AHE _atom_sites.fract_transf_matrix[1][1] 0.012574 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006271 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 300 300 NAD NAD . F 3 0WE A 1 301 301 0WE LIG . G 2 NAD D 1 300 300 NAD NAD . H 3 0WE D 1 301 301 0WE LIG . I 2 NAD C 1 300 300 NAD NAD . J 3 0WE C 1 301 301 0WE LIG . K 2 NAD B 1 300 300 NAD NAD . L 3 0WE B 1 301 301 0WE LIG . M 4 HOH A 1 401 11 HOH HOH . M 4 HOH A 2 402 5 HOH HOH . M 4 HOH A 3 403 167 HOH HOH . M 4 HOH A 4 404 13 HOH HOH . M 4 HOH A 5 405 106 HOH HOH . M 4 HOH A 6 406 234 HOH HOH . M 4 HOH A 7 407 151 HOH HOH . M 4 HOH A 8 408 31 HOH HOH . M 4 HOH A 9 409 153 HOH HOH . M 4 HOH A 10 410 80 HOH HOH . M 4 HOH A 11 411 132 HOH HOH . M 4 HOH A 12 412 70 HOH HOH . M 4 HOH A 13 413 72 HOH HOH . M 4 HOH A 14 414 240 HOH HOH . M 4 HOH A 15 415 74 HOH HOH . M 4 HOH A 16 416 204 HOH HOH . M 4 HOH A 17 417 56 HOH HOH . M 4 HOH A 18 418 155 HOH HOH . M 4 HOH A 19 419 22 HOH HOH . M 4 HOH A 20 420 33 HOH HOH . M 4 HOH A 21 421 69 HOH HOH . M 4 HOH A 22 422 268 HOH HOH . M 4 HOH A 23 423 289 HOH HOH . M 4 HOH A 24 424 199 HOH HOH . M 4 HOH A 25 425 54 HOH HOH . M 4 HOH A 26 426 100 HOH HOH . M 4 HOH A 27 427 107 HOH HOH . M 4 HOH A 28 428 49 HOH HOH . M 4 HOH A 29 429 47 HOH HOH . M 4 HOH A 30 430 218 HOH HOH . M 4 HOH A 31 431 170 HOH HOH . M 4 HOH A 32 432 125 HOH HOH . M 4 HOH A 33 433 187 HOH HOH . M 4 HOH A 34 434 6 HOH HOH . M 4 HOH A 35 435 161 HOH HOH . M 4 HOH A 36 436 78 HOH HOH . M 4 HOH A 37 437 212 HOH HOH . M 4 HOH A 38 438 68 HOH HOH . M 4 HOH A 39 439 141 HOH HOH . M 4 HOH A 40 440 103 HOH HOH . M 4 HOH A 41 441 173 HOH HOH . M 4 HOH A 42 442 306 HOH HOH . N 4 HOH D 1 401 1 HOH HOH . N 4 HOH D 2 402 178 HOH HOH . N 4 HOH D 3 403 266 HOH HOH . N 4 HOH D 4 404 174 HOH HOH . N 4 HOH D 5 405 17 HOH HOH . N 4 HOH D 6 406 81 HOH HOH . N 4 HOH D 7 407 201 HOH HOH . N 4 HOH D 8 408 267 HOH HOH . N 4 HOH D 9 409 35 HOH HOH . N 4 HOH D 10 410 45 HOH HOH . N 4 HOH D 11 411 77 HOH HOH . N 4 HOH D 12 412 14 HOH HOH . N 4 HOH D 13 413 98 HOH HOH . N 4 HOH D 14 414 39 HOH HOH . N 4 HOH D 15 415 2 HOH HOH . N 4 HOH D 16 416 41 HOH HOH . N 4 HOH D 17 417 210 HOH HOH . N 4 HOH D 18 418 129 HOH HOH . N 4 HOH D 19 419 32 HOH HOH . N 4 HOH D 20 420 8 HOH HOH . N 4 HOH D 21 421 276 HOH HOH . N 4 HOH D 22 422 127 HOH HOH . N 4 HOH D 23 423 44 HOH HOH . N 4 HOH D 24 424 18 HOH HOH . N 4 HOH D 25 425 73 HOH HOH . N 4 HOH D 26 426 57 HOH HOH . N 4 HOH D 27 427 55 HOH HOH . N 4 HOH D 28 428 166 HOH HOH . N 4 HOH D 29 429 278 HOH HOH . N 4 HOH D 30 430 19 HOH HOH . N 4 HOH D 31 431 121 HOH HOH . N 4 HOH D 32 432 42 HOH HOH . N 4 HOH D 33 433 215 HOH HOH . N 4 HOH D 34 434 28 HOH HOH . N 4 HOH D 35 435 84 HOH HOH . N 4 HOH D 36 436 7 HOH HOH . N 4 HOH D 37 437 46 HOH HOH . N 4 HOH D 38 438 65 HOH HOH . N 4 HOH D 39 439 112 HOH HOH . N 4 HOH D 40 440 67 HOH HOH . N 4 HOH D 41 441 302 HOH HOH . O 4 HOH C 1 401 20 HOH HOH . O 4 HOH C 2 402 12 HOH HOH . O 4 HOH C 3 403 181 HOH HOH . O 4 HOH C 4 404 200 HOH HOH . O 4 HOH C 5 405 58 HOH HOH . O 4 HOH C 6 406 279 HOH HOH . O 4 HOH C 7 407 16 HOH HOH . O 4 HOH C 8 408 85 HOH HOH . O 4 HOH C 9 409 139 HOH HOH . O 4 HOH C 10 410 23 HOH HOH . O 4 HOH C 11 411 108 HOH HOH . O 4 HOH C 12 412 15 HOH HOH . O 4 HOH C 13 413 195 HOH HOH . O 4 HOH C 14 414 10 HOH HOH . O 4 HOH C 15 415 89 HOH HOH . O 4 HOH C 16 416 37 HOH HOH . O 4 HOH C 17 417 75 HOH HOH . O 4 HOH C 18 418 232 HOH HOH . O 4 HOH C 19 419 160 HOH HOH . O 4 HOH C 20 420 82 HOH HOH . O 4 HOH C 21 421 29 HOH HOH . O 4 HOH C 22 422 239 HOH HOH . O 4 HOH C 23 423 128 HOH HOH . O 4 HOH C 24 424 208 HOH HOH . O 4 HOH C 25 425 71 HOH HOH . O 4 HOH C 26 426 185 HOH HOH . O 4 HOH C 27 427 273 HOH HOH . O 4 HOH C 28 428 66 HOH HOH . O 4 HOH C 29 429 95 HOH HOH . O 4 HOH C 30 430 131 HOH HOH . O 4 HOH C 31 431 304 HOH HOH . P 4 HOH B 1 401 101 HOH HOH . P 4 HOH B 2 402 193 HOH HOH . P 4 HOH B 3 403 4 HOH HOH . P 4 HOH B 4 404 142 HOH HOH . P 4 HOH B 5 405 30 HOH HOH . P 4 HOH B 6 406 91 HOH HOH . P 4 HOH B 7 407 24 HOH HOH . P 4 HOH B 8 408 149 HOH HOH . P 4 HOH B 9 409 202 HOH HOH . P 4 HOH B 10 410 126 HOH HOH . P 4 HOH B 11 411 188 HOH HOH . P 4 HOH B 12 412 40 HOH HOH . P 4 HOH B 13 413 87 HOH HOH . P 4 HOH B 14 414 63 HOH HOH . P 4 HOH B 15 415 168 HOH HOH . P 4 HOH B 16 416 159 HOH HOH . P 4 HOH B 17 417 157 HOH HOH . P 4 HOH B 18 418 3 HOH HOH . P 4 HOH B 19 419 9 HOH HOH . P 4 HOH B 20 420 60 HOH HOH . P 4 HOH B 21 421 43 HOH HOH . P 4 HOH B 22 422 124 HOH HOH . P 4 HOH B 23 423 295 HOH HOH . P 4 HOH B 24 424 111 HOH HOH . P 4 HOH B 25 425 97 HOH HOH . P 4 HOH B 26 426 53 HOH HOH . P 4 HOH B 27 427 186 HOH HOH . P 4 HOH B 28 428 21 HOH HOH . P 4 HOH B 29 429 165 HOH HOH . P 4 HOH B 30 430 183 HOH HOH . P 4 HOH B 31 431 270 HOH HOH . P 4 HOH B 32 432 252 HOH HOH . P 4 HOH B 33 433 120 HOH HOH . P 4 HOH B 34 434 64 HOH HOH . P 4 HOH B 35 435 115 HOH HOH . P 4 HOH B 36 436 293 HOH HOH . P 4 HOH B 37 437 209 HOH HOH . P 4 HOH B 38 438 190 HOH HOH . P 4 HOH B 39 439 220 HOH HOH . P 4 HOH B 40 440 104 HOH HOH . P 4 HOH B 41 441 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . K 2 -30.811 13.796 -40.941 1 50.44 ? PA NAD 300 B 1 HETATM 2 O O1A NAD . . . K 2 -31.194 15.261 -40.919 1 51.8 ? O1A NAD 300 B 1 HETATM 3 O O2A NAD . . . K 2 -31.398 12.821 -41.974 1 50.89 ? O2A NAD 300 B 1 HETATM 4 O O5B NAD . . . K 2 -29.193 13.715 -41.018 1 49.4 ? O5B NAD 300 B 1 HETATM 5 C C5B NAD . . . K 2 -28.533 12.684 -41.757 1 52.36 ? C5B NAD 300 B 1 HETATM 6 C C4B NAD . . . K 2 -27.504 13.349 -42.675 1 60.62 ? C4B NAD 300 B 1 HETATM 7 O O4B NAD . . . K 2 -26.604 12.378 -43.232 1 61.97 ? O4B NAD 300 B 1 HETATM 8 C C3B NAD . . . K 2 -28.187 14.072 -43.846 1 63.47 ? C3B NAD 300 B 1 HETATM 9 O O3B NAD . . . K 2 -27.639 15.394 -43.968 1 60.73 ? O3B NAD 300 B 1 HETATM 10 C C2B NAD . . . K 2 -27.889 13.199 -45.056 1 66.42 ? C2B NAD 300 B 1 HETATM 11 O O2B NAD . . . K 2 -27.941 13.912 -46.301 1 72.65 ? O2B NAD 300 B 1 HETATM 12 C C1B NAD . . . K 2 -26.501 12.674 -44.651 1 69.24 ? C1B NAD 300 B 1 HETATM 13 N N9A NAD . . . K 2 -25.934 11.597 -45.526 1 62.83 ? N9A NAD 300 B 1 HETATM 14 C C8A NAD . . . K 2 -26.499 10.389 -45.804 1 60.43 ? C8A NAD 300 B 1 HETATM 15 N N7A NAD . . . K 2 -25.718 9.653 -46.647 1 62.31 ? N7A NAD 300 B 1 HETATM 16 C C5A NAD . . . K 2 -24.622 10.405 -46.914 1 60.87 ? C5A NAD 300 B 1 HETATM 17 C C6A NAD . . . K 2 -23.397 10.233 -47.735 1 59.04 ? C6A NAD 300 B 1 HETATM 18 N N6A NAD . . . K 2 -23.239 9.062 -48.418 1 58.6 ? N6A NAD 300 B 1 HETATM 19 N N1A NAD . . . K 2 -22.475 11.262 -47.754 1 58.74 ? N1A NAD 300 B 1 HETATM 20 C C2A NAD . . . K 2 -22.646 12.431 -47.061 1 56.95 ? C2A NAD 300 B 1 HETATM 21 N N3A NAD . . . K 2 -23.751 12.652 -46.294 1 63.4 ? N3A NAD 300 B 1 HETATM 22 C C4A NAD . . . K 2 -24.755 11.694 -46.177 1 62.67 ? C4A NAD 300 B 1 HETATM 23 O O3 NAD . . . K 2 -31.162 13.138 -39.489 1 53.6 ? O3 NAD 300 B 1 HETATM 24 P PN NAD . . . K 2 -30.452 13.382 -38.055 1 49.72 ? PN NAD 300 B 1 HETATM 25 O O1N NAD . . . K 2 -31.362 12.629 -37.11 1 62.55 ? O1N NAD 300 B 1 HETATM 26 O O2N NAD . . . K 2 -30.171 14.861 -37.825 1 56.85 ? O2N NAD 300 B 1 HETATM 27 O O5D NAD . . . K 2 -29.108 12.533 -38.173 1 53.1 ? O5D NAD 300 B 1 HETATM 28 C C5D NAD . . . K 2 -27.892 12.996 -37.587 1 51.16 ? C5D NAD 300 B 1 HETATM 29 C C4D NAD . . . K 2 -27.123 11.818 -37.005 1 47.86 ? C4D NAD 300 B 1 HETATM 30 O O4D NAD . . . K 2 -27.663 11.587 -35.705 1 49.59 ? O4D NAD 300 B 1 HETATM 31 C C3D NAD . . . K 2 -27.29 10.517 -37.765 1 44.5 ? C3D NAD 300 B 1 HETATM 32 O O3D NAD . . . K 2 -26.037 9.856 -37.8 1 40.85 ? O3D NAD 300 B 1 HETATM 33 C C2D NAD . . . K 2 -28.206 9.67 -36.906 1 45.19 ? C2D NAD 300 B 1 HETATM 34 O O2D NAD . . . K 2 -27.862 8.305 -36.971 1 46.58 ? O2D NAD 300 B 1 HETATM 35 C C1D NAD . . . K 2 -27.96 10.19 -35.503 1 48.13 ? C1D NAD 300 B 1 HETATM 36 N N1N NAD . . . K 2 -29.049 10.059 -34.507 1 49.03 ? N1N NAD 300 B 1 HETATM 37 C C2N NAD . . . K 2 -30.341 10.331 -34.83 1 45.21 ? C2N NAD 300 B 1 HETATM 38 C C3N NAD . . . K 2 -31.363 10.248 -33.88 1 48.01 ? C3N NAD 300 B 1 HETATM 39 C C7N NAD . . . K 2 -32.823 10.512 -34.292 1 51.26 ? C7N NAD 300 B 1 HETATM 40 O O7N NAD . . . K 2 -33.72 9.942 -33.721 1 46.06 ? O7N NAD 300 B 1 HETATM 41 N N7N NAD . . . K 2 -33.176 11.313 -35.311 1 47.92 ? N7N NAD 300 B 1 HETATM 42 C C4N NAD . . . K 2 -31.009 9.885 -32.57 1 49.4 ? C4N NAD 300 B 1 HETATM 43 C C5N NAD . . . K 2 -29.67 9.616 -32.226 1 51.1 ? C5N NAD 300 B 1 HETATM 44 C C6N NAD . . . K 2 -28.706 9.712 -33.232 1 48.77 ? C6N NAD 300 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 44 #