data_6AHE # _model_server_result.job_id 3tBtL7vnHbrUSv2rqQNaig _model_server_result.datetime_utc '2024-10-30 15:20:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ahe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 6AHE # _exptl.entry_id 6AHE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.436 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AHE _cell.length_a 79.529 _cell.length_b 89.573 _cell.length_c 159.473 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AHE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C22 H23 N3 O3' _chem_comp.formula_weight 377.436 _chem_comp.id 0WE _chem_comp.mon_nstd_flag . _chem_comp.name N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C38 C7 0WE sing 1 n n C4 N3 0WE sing 2 n n C11 C8 0WE doub 3 n y C11 C12 0WE sing 4 n y C7 C8 0WE sing 5 n y C7 C6 0WE doub 6 n y C8 C9 0WE sing 7 n y C12 C13 0WE doub 8 n y C5 C6 0WE sing 9 n n C5 N3 0WE sing 10 n n C6 O10 0WE sing 11 n y N3 C1 0WE sing 12 n n C9 O10 0WE sing 13 n y C9 C14 0WE doub 14 n y C13 C14 0WE sing 15 n y O2 C1 0WE doub 16 n n C1 C17 0WE sing 17 n n C17 C18 0WE sing 18 n n C18 C19 0WE sing 19 n n C19 C24 0WE doub 20 n y C19 C20 0WE sing 21 n y C24 C23 0WE sing 22 n y C20 N21 0WE doub 23 n y C23 C26 0WE sing 24 n n C23 C22 0WE doub 25 n y C26 C25 0WE sing 26 n n N21 C22 0WE sing 27 n y C22 N36 0WE sing 28 n n C25 C37 0WE sing 29 n n N36 C37 0WE sing 30 n n C37 O28 0WE doub 31 n n C17 H1 0WE sing 32 n n C17 H2 0WE sing 33 n n C18 H3 0WE sing 34 n n C18 H4 0WE sing 35 n n C24 H5 0WE sing 36 n n C26 H6 0WE sing 37 n n C26 H7 0WE sing 38 n n C25 H8 0WE sing 39 n n C25 H9 0WE sing 40 n n C20 H10 0WE sing 41 n n N36 H11 0WE sing 42 n n C4 H12 0WE sing 43 n n C4 H13 0WE sing 44 n n C4 H14 0WE sing 45 n n C5 H15 0WE sing 46 n n C5 H16 0WE sing 47 n n C38 H17 0WE sing 48 n n C38 H18 0WE sing 49 n n C38 H19 0WE sing 50 n n C14 H20 0WE sing 51 n n C13 H21 0WE sing 52 n n C12 H22 0WE sing 53 n n C11 H23 0WE sing 54 n n # _atom_sites.entry_id 6AHE _atom_sites.fract_transf_matrix[1][1] 0.012574 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006271 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD A 1 300 300 NAD NAD . F 3 0WE A 1 301 301 0WE LIG . G 2 NAD D 1 300 300 NAD NAD . H 3 0WE D 1 301 301 0WE LIG . I 2 NAD C 1 300 300 NAD NAD . J 3 0WE C 1 301 301 0WE LIG . K 2 NAD B 1 300 300 NAD NAD . L 3 0WE B 1 301 301 0WE LIG . M 4 HOH A 1 401 11 HOH HOH . M 4 HOH A 2 402 5 HOH HOH . M 4 HOH A 3 403 167 HOH HOH . M 4 HOH A 4 404 13 HOH HOH . M 4 HOH A 5 405 106 HOH HOH . M 4 HOH A 6 406 234 HOH HOH . M 4 HOH A 7 407 151 HOH HOH . M 4 HOH A 8 408 31 HOH HOH . M 4 HOH A 9 409 153 HOH HOH . M 4 HOH A 10 410 80 HOH HOH . M 4 HOH A 11 411 132 HOH HOH . M 4 HOH A 12 412 70 HOH HOH . M 4 HOH A 13 413 72 HOH HOH . M 4 HOH A 14 414 240 HOH HOH . M 4 HOH A 15 415 74 HOH HOH . M 4 HOH A 16 416 204 HOH HOH . M 4 HOH A 17 417 56 HOH HOH . M 4 HOH A 18 418 155 HOH HOH . M 4 HOH A 19 419 22 HOH HOH . M 4 HOH A 20 420 33 HOH HOH . M 4 HOH A 21 421 69 HOH HOH . M 4 HOH A 22 422 268 HOH HOH . M 4 HOH A 23 423 289 HOH HOH . M 4 HOH A 24 424 199 HOH HOH . M 4 HOH A 25 425 54 HOH HOH . M 4 HOH A 26 426 100 HOH HOH . M 4 HOH A 27 427 107 HOH HOH . M 4 HOH A 28 428 49 HOH HOH . M 4 HOH A 29 429 47 HOH HOH . M 4 HOH A 30 430 218 HOH HOH . M 4 HOH A 31 431 170 HOH HOH . M 4 HOH A 32 432 125 HOH HOH . M 4 HOH A 33 433 187 HOH HOH . M 4 HOH A 34 434 6 HOH HOH . M 4 HOH A 35 435 161 HOH HOH . M 4 HOH A 36 436 78 HOH HOH . M 4 HOH A 37 437 212 HOH HOH . M 4 HOH A 38 438 68 HOH HOH . M 4 HOH A 39 439 141 HOH HOH . M 4 HOH A 40 440 103 HOH HOH . M 4 HOH A 41 441 173 HOH HOH . M 4 HOH A 42 442 306 HOH HOH . N 4 HOH D 1 401 1 HOH HOH . N 4 HOH D 2 402 178 HOH HOH . N 4 HOH D 3 403 266 HOH HOH . N 4 HOH D 4 404 174 HOH HOH . N 4 HOH D 5 405 17 HOH HOH . N 4 HOH D 6 406 81 HOH HOH . N 4 HOH D 7 407 201 HOH HOH . N 4 HOH D 8 408 267 HOH HOH . N 4 HOH D 9 409 35 HOH HOH . N 4 HOH D 10 410 45 HOH HOH . N 4 HOH D 11 411 77 HOH HOH . N 4 HOH D 12 412 14 HOH HOH . N 4 HOH D 13 413 98 HOH HOH . N 4 HOH D 14 414 39 HOH HOH . N 4 HOH D 15 415 2 HOH HOH . N 4 HOH D 16 416 41 HOH HOH . N 4 HOH D 17 417 210 HOH HOH . N 4 HOH D 18 418 129 HOH HOH . N 4 HOH D 19 419 32 HOH HOH . N 4 HOH D 20 420 8 HOH HOH . N 4 HOH D 21 421 276 HOH HOH . N 4 HOH D 22 422 127 HOH HOH . N 4 HOH D 23 423 44 HOH HOH . N 4 HOH D 24 424 18 HOH HOH . N 4 HOH D 25 425 73 HOH HOH . N 4 HOH D 26 426 57 HOH HOH . N 4 HOH D 27 427 55 HOH HOH . N 4 HOH D 28 428 166 HOH HOH . N 4 HOH D 29 429 278 HOH HOH . N 4 HOH D 30 430 19 HOH HOH . N 4 HOH D 31 431 121 HOH HOH . N 4 HOH D 32 432 42 HOH HOH . N 4 HOH D 33 433 215 HOH HOH . N 4 HOH D 34 434 28 HOH HOH . N 4 HOH D 35 435 84 HOH HOH . N 4 HOH D 36 436 7 HOH HOH . N 4 HOH D 37 437 46 HOH HOH . N 4 HOH D 38 438 65 HOH HOH . N 4 HOH D 39 439 112 HOH HOH . N 4 HOH D 40 440 67 HOH HOH . N 4 HOH D 41 441 302 HOH HOH . O 4 HOH C 1 401 20 HOH HOH . O 4 HOH C 2 402 12 HOH HOH . O 4 HOH C 3 403 181 HOH HOH . O 4 HOH C 4 404 200 HOH HOH . O 4 HOH C 5 405 58 HOH HOH . O 4 HOH C 6 406 279 HOH HOH . O 4 HOH C 7 407 16 HOH HOH . O 4 HOH C 8 408 85 HOH HOH . O 4 HOH C 9 409 139 HOH HOH . O 4 HOH C 10 410 23 HOH HOH . O 4 HOH C 11 411 108 HOH HOH . O 4 HOH C 12 412 15 HOH HOH . O 4 HOH C 13 413 195 HOH HOH . O 4 HOH C 14 414 10 HOH HOH . O 4 HOH C 15 415 89 HOH HOH . O 4 HOH C 16 416 37 HOH HOH . O 4 HOH C 17 417 75 HOH HOH . O 4 HOH C 18 418 232 HOH HOH . O 4 HOH C 19 419 160 HOH HOH . O 4 HOH C 20 420 82 HOH HOH . O 4 HOH C 21 421 29 HOH HOH . O 4 HOH C 22 422 239 HOH HOH . O 4 HOH C 23 423 128 HOH HOH . O 4 HOH C 24 424 208 HOH HOH . O 4 HOH C 25 425 71 HOH HOH . O 4 HOH C 26 426 185 HOH HOH . O 4 HOH C 27 427 273 HOH HOH . O 4 HOH C 28 428 66 HOH HOH . O 4 HOH C 29 429 95 HOH HOH . O 4 HOH C 30 430 131 HOH HOH . O 4 HOH C 31 431 304 HOH HOH . P 4 HOH B 1 401 101 HOH HOH . P 4 HOH B 2 402 193 HOH HOH . P 4 HOH B 3 403 4 HOH HOH . P 4 HOH B 4 404 142 HOH HOH . P 4 HOH B 5 405 30 HOH HOH . P 4 HOH B 6 406 91 HOH HOH . P 4 HOH B 7 407 24 HOH HOH . P 4 HOH B 8 408 149 HOH HOH . P 4 HOH B 9 409 202 HOH HOH . P 4 HOH B 10 410 126 HOH HOH . P 4 HOH B 11 411 188 HOH HOH . P 4 HOH B 12 412 40 HOH HOH . P 4 HOH B 13 413 87 HOH HOH . P 4 HOH B 14 414 63 HOH HOH . P 4 HOH B 15 415 168 HOH HOH . P 4 HOH B 16 416 159 HOH HOH . P 4 HOH B 17 417 157 HOH HOH . P 4 HOH B 18 418 3 HOH HOH . P 4 HOH B 19 419 9 HOH HOH . P 4 HOH B 20 420 60 HOH HOH . P 4 HOH B 21 421 43 HOH HOH . P 4 HOH B 22 422 124 HOH HOH . P 4 HOH B 23 423 295 HOH HOH . P 4 HOH B 24 424 111 HOH HOH . P 4 HOH B 25 425 97 HOH HOH . P 4 HOH B 26 426 53 HOH HOH . P 4 HOH B 27 427 186 HOH HOH . P 4 HOH B 28 428 21 HOH HOH . P 4 HOH B 29 429 165 HOH HOH . P 4 HOH B 30 430 183 HOH HOH . P 4 HOH B 31 431 270 HOH HOH . P 4 HOH B 32 432 252 HOH HOH . P 4 HOH B 33 433 120 HOH HOH . P 4 HOH B 34 434 64 HOH HOH . P 4 HOH B 35 435 115 HOH HOH . P 4 HOH B 36 436 293 HOH HOH . P 4 HOH B 37 437 209 HOH HOH . P 4 HOH B 38 438 190 HOH HOH . P 4 HOH B 39 439 220 HOH HOH . P 4 HOH B 40 440 104 HOH HOH . P 4 HOH B 41 441 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 0WE . . . F 3 -32.81 -9.523 -5.021 1 44.12 ? O2 0WE 301 A 1 HETATM 2 C C1 0WE . . . F 3 -33.981 -9.851 -5.072 1 46.67 ? C1 0WE 301 A 1 HETATM 3 C C17 0WE . . . F 3 -34.756 -9.93 -3.81 1 47.65 ? C17 0WE 301 A 1 HETATM 4 C C18 0WE . . . F 3 -34.467 -9.01 -2.877 1 57.4 ? C18 0WE 301 A 1 HETATM 5 C C19 0WE . . . F 3 -35.111 -8.906 -1.543 1 59.91 ? C19 0WE 301 A 1 HETATM 6 C C24 0WE . . . F 3 -36.454 -9.25 -1.307 1 57.24 ? C24 0WE 301 A 1 HETATM 7 C C23 0WE . . . F 3 -36.974 -9.136 -0.016 1 58.25 ? C23 0WE 301 A 1 HETATM 8 C C26 0WE . . . F 3 -38.31 -9.45 0.288 1 57.03 ? C26 0WE 301 A 1 HETATM 9 C C25 0WE . . . F 3 -38.783 -9.317 1.596 1 61.16 ? C25 0WE 301 A 1 HETATM 10 C C20 0WE . . . F 3 -34.327 -8.447 -0.497 1 59.17 ? C20 0WE 301 A 1 HETATM 11 N N21 0WE . . . F 3 -34.854 -8.316 0.733 1 60.39 ? N21 0WE 301 A 1 HETATM 12 C C22 0WE . . . F 3 -36.142 -8.644 0.993 1 61.21 ? C22 0WE 301 A 1 HETATM 13 N N36 0WE . . . F 3 -36.628 -8.506 2.252 1 66.54 ? N36 0WE 301 A 1 HETATM 14 C C37 0WE . . . F 3 -37.906 -8.83 2.57 1 63.52 ? C37 0WE 301 A 1 HETATM 15 O O28 0WE . . . F 3 -38.268 -8.682 3.751 1 65.58 ? O28 0WE 301 A 1 HETATM 16 N N3 0WE . . . F 3 -34.562 -10.095 -6.239 1 48.6 ? N3 0WE 301 A 1 HETATM 17 C C4 0WE . . . F 3 -33.846 -9.993 -7.518 1 51.28 ? C4 0WE 301 A 1 HETATM 18 C C5 0WE . . . F 3 -35.963 -10.443 -6.395 1 50.2 ? C5 0WE 301 A 1 HETATM 19 C C6 0WE . . . F 3 -36.635 -9.122 -6.445 1 43.96 ? C6 0WE 301 A 1 HETATM 20 O O10 0WE . . . F 3 -36.898 -8.344 -5.363 1 50.08 ? O10 0WE 301 A 1 HETATM 21 C C9 0WE . . . F 3 -37.471 -7.223 -5.738 1 49.95 ? C9 0WE 301 A 1 HETATM 22 C C8 0WE . . . F 3 -37.633 -7.184 -7.115 1 48.68 ? C8 0WE 301 A 1 HETATM 23 C C7 0WE . . . F 3 -37.091 -8.421 -7.552 1 46.33 ? C7 0WE 301 A 1 HETATM 24 C C38 0WE . . . F 3 -37.116 -8.783 -9.012 1 42.52 ? C38 0WE 301 A 1 HETATM 25 C C14 0WE . . . F 3 -37.877 -6.182 -4.895 1 48.83 ? C14 0WE 301 A 1 HETATM 26 C C13 0WE . . . F 3 -38.487 -5.084 -5.513 1 49.4 ? C13 0WE 301 A 1 HETATM 27 C C12 0WE . . . F 3 -38.664 -5.023 -6.912 1 45.74 ? C12 0WE 301 A 1 HETATM 28 C C11 0WE . . . F 3 -38.243 -6.076 -7.725 1 47.09 ? C11 0WE 301 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #