data_6AJ5
#
_model_server_result.job_id            tA03bNxVsw1pQhW9p_gKnQ 
_model_server_result.datetime_utc      '2024-11-24 16:53:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6aj5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":501}' 
#
_entry.id    6AJ5 
#
_exptl.entry_id    6AJ5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AJ5 
_cell.length_a            248.808 
_cell.length_b            248.808 
_cell.length_c            248.808 
_cell.Z_PDB               96 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AJ5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        197 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F 1 1 
B,G,H 2 1 
C,I,J 3 1 
D,K,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 98 A CYS 76 1_555 A SG CYS 166 A CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 98 B CYS 76 1_555 B SG CYS 166 B CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf3 C SG CYS 98 C CYS 76 1_555 C SG CYS 166 C CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? 
disulf ? disulf4 D SG CYS 98 D CYS 76 1_555 D SG CYS 166 D CYS 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     6AJ5 
_atom_sites.fract_transf_matrix[1][1]    0.004019 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004019 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FMN A 1 501 451 FMN FMN . 
F 3 ORO A 1 502 452 ORO ORO . 
G 2 FMN B 1 501 451 FMN FMN . 
H 3 ORO B 1 502 452 ORO ORO . 
I 2 FMN C 1 501 451 FMN FMN . 
J 3 ORO C 1 502 452 ORO ORO . 
K 2 FMN D 1 501 451 FMN FMN . 
L 3 ORO D 1 502 452 ORO ORO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . K 2 80.283 268.789 339.589 1 34.84 ? N1 FMN 501 D 1 
HETATM 2 C C2 FMN . . . K 2 80.516 269.729 338.654 1 34.68 ? C2 FMN 501 D 1 
HETATM 3 O O2 FMN . . . K 2 80.002 269.576 337.521 1 34.68 ? O2 FMN 501 D 1 
HETATM 4 N N3 FMN . . . K 2 81.294 270.799 338.897 1 34.64 ? N3 FMN 501 D 1 
HETATM 5 C C4 FMN . . . K 2 81.878 271.021 340.072 1 34.83 ? C4 FMN 501 D 1 
HETATM 6 O O4 FMN . . . K 2 82.583 272.022 340.256 1 35.25 ? O4 FMN 501 D 1 
HETATM 7 C C4A FMN . . . K 2 81.662 270.055 341.149 1 35.01 ? C4A FMN 501 D 1 
HETATM 8 N N5 FMN . . . K 2 82.207 270.212 342.362 1 35.2 ? N5 FMN 501 D 1 
HETATM 9 C C5A FMN . . . K 2 81.992 269.296 343.322 1 35.5 ? C5A FMN 501 D 1 
HETATM 10 C C6 FMN . . . K 2 82.592 269.499 344.539 1 35.86 ? C6 FMN 501 D 1 
HETATM 11 C C7 FMN . . . K 2 82.418 268.596 345.574 1 36.4 ? C7 FMN 501 D 1 
HETATM 12 C C7M FMN . . . K 2 83.099 268.884 346.884 1 37.09 ? C7M FMN 501 D 1 
HETATM 13 C C8 FMN . . . K 2 81.578 267.374 345.389 1 36.61 ? C8 FMN 501 D 1 
HETATM 14 C C8M FMN . . . K 2 81.346 266.362 346.509 1 37.14 ? C8M FMN 501 D 1 
HETATM 15 C C9 FMN . . . K 2 80.975 267.175 344.145 1 36.2 ? C9 FMN 501 D 1 
HETATM 16 C C9A FMN . . . K 2 81.147 268.084 343.089 1 35.76 ? C9A FMN 501 D 1 
HETATM 17 N N10 FMN . . . K 2 80.565 267.905 341.796 1 35.66 ? N10 FMN 501 D 1 
HETATM 18 C C10 FMN . . . K 2 80.815 268.889 340.822 1 35.18 ? C10 FMN 501 D 1 
HETATM 19 C C1' FMN . . . K 2 79.664 266.795 341.437 1 35.84 ? C1' FMN 501 D 1 
HETATM 20 C C2' FMN . . . K 2 80.369 265.613 340.841 1 36.02 ? C2' FMN 501 D 1 
HETATM 21 O O2' FMN . . . K 2 80.712 266 339.513 1 35.76 ? O2' FMN 501 D 1 
HETATM 22 C C3' FMN . . . K 2 79.488 264.358 340.841 1 36.45 ? C3' FMN 501 D 1 
HETATM 23 O O3' FMN . . . K 2 78.343 264.565 340.005 1 36.27 ? O3' FMN 501 D 1 
HETATM 24 C C4' FMN . . . K 2 79.047 263.932 342.24 1 37.25 ? C4' FMN 501 D 1 
HETATM 25 O O4' FMN . . . K 2 80.192 263.884 343.082 1 37.26 ? O4' FMN 501 D 1 
HETATM 26 C C5' FMN . . . K 2 78.419 262.561 342.275 1 38.14 ? C5' FMN 501 D 1 
HETATM 27 O O5' FMN . . . K 2 79.447 261.58 342.19 1 39.1 ? O5' FMN 501 D 1 
HETATM 28 P P FMN . . . K 2 79.919 260.677 343.447 1 40.73 ? P FMN 501 D 1 
HETATM 29 O O1P FMN . . . K 2 80.498 259.423 342.775 1 40.99 ? O1P FMN 501 D 1 
HETATM 30 O O2P FMN . . . K 2 78.708 260.423 344.323 1 41.07 ? O2P FMN 501 D 1 
HETATM 31 O O3P FMN . . . K 2 80.909 261.568 344.138 1 40.36 ? O3P FMN 501 D 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#