data_6AJ6
#
_model_server_result.job_id            BwTa_qnHRWO2CbBCNwDWpQ 
_model_server_result.datetime_utc      '2024-11-24 11:55:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6aj6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":501}' 
#
_entry.id    6AJ6 
#
_exptl.entry_id    6AJ6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          89.98 
_cell.angle_gamma         90 
_cell.entry_id            6AJ6 
_cell.length_a            62.442 
_cell.length_b            109.754 
_cell.length_c            64.961 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AJ6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 235 n n 
PA O2A NAP sing 236 n n 
PA O5B NAP sing 237 n n 
PA O3 NAP sing 238 n n 
O2A HOA2 NAP sing 239 n n 
O5B C5B NAP sing 240 n n 
C5B C4B NAP sing 241 n n 
C5B H51A NAP sing 242 n n 
C5B H52A NAP sing 243 n n 
C4B O4B NAP sing 244 n n 
C4B C3B NAP sing 245 n n 
C4B H4B NAP sing 246 n n 
O4B C1B NAP sing 247 n n 
C3B O3B NAP sing 248 n n 
C3B C2B NAP sing 249 n n 
C3B H3B NAP sing 250 n n 
O3B HO3A NAP sing 251 n n 
C2B O2B NAP sing 252 n n 
C2B C1B NAP sing 253 n n 
C2B H2B NAP sing 254 n n 
O2B P2B NAP sing 255 n n 
C1B N9A NAP sing 256 n n 
C1B H1B NAP sing 257 n n 
N9A C8A NAP sing 258 n y 
N9A C4A NAP sing 259 n y 
C8A N7A NAP doub 260 n y 
C8A H8A NAP sing 261 n n 
N7A C5A NAP sing 262 n y 
C5A C6A NAP sing 263 n y 
C5A C4A NAP doub 264 n y 
C6A N6A NAP sing 265 n n 
C6A N1A NAP doub 266 n y 
N6A H61A NAP sing 267 n n 
N6A H62A NAP sing 268 n n 
N1A C2A NAP sing 269 n y 
C2A N3A NAP doub 270 n y 
C2A H2A NAP sing 271 n n 
N3A C4A NAP sing 272 n y 
O3 PN NAP sing 273 n n 
PN O1N NAP doub 274 n n 
PN O2N NAP sing 275 n n 
PN O5D NAP sing 276 n n 
O5D C5D NAP sing 277 n n 
C5D C4D NAP sing 278 n n 
C5D H51N NAP sing 279 n n 
C5D H52N NAP sing 280 n n 
C4D O4D NAP sing 281 n n 
C4D C3D NAP sing 282 n n 
C4D H4D NAP sing 283 n n 
O4D C1D NAP sing 284 n n 
C3D O3D NAP sing 285 n n 
C3D C2D NAP sing 286 n n 
C3D H3D NAP sing 287 n n 
O3D HO3N NAP sing 288 n n 
C2D O2D NAP sing 289 n n 
C2D C1D NAP sing 290 n n 
C2D H2D NAP sing 291 n n 
O2D HO2N NAP sing 292 n n 
C1D N1N NAP sing 293 n n 
C1D H1D NAP sing 294 n n 
N1N C2N NAP sing 295 n y 
N1N C6N NAP doub 296 n y 
C2N C3N NAP doub 297 n y 
C2N H2N NAP sing 298 n n 
C3N C7N NAP sing 299 n n 
C3N C4N NAP sing 300 n y 
C7N O7N NAP doub 301 n n 
C7N N7N NAP sing 302 n n 
N7N H71N NAP sing 303 n n 
N7N H72N NAP sing 304 n n 
C4N C5N NAP doub 305 n y 
C4N H4N NAP sing 306 n n 
C5N C6N NAP sing 307 n y 
C5N H5N NAP sing 308 n n 
C6N H6N NAP sing 309 n n 
P2B O1X NAP doub 310 n n 
P2B O2X NAP sing 311 n n 
P2B O3X NAP sing 312 n n 
O2X HOP2 NAP sing 313 n n 
O3X HOP3 NAP sing 314 n n 
#
_atom_sites.entry_id                     6AJ6 
_atom_sites.fract_transf_matrix[1][1]    0.016015 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    -0.000005 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009111 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015394 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 501 415 NAP NAP . 
D 2 NAP C 1 501 415 NAP NAP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . D 2 -6.458 -22.953 14.815 1 60.24 ? PA NAP 501 C 1 
HETATM 2 O O1A NAP . . . D 2 -5.069 -23.318 14.315 1 52.3 ? O1A NAP 501 C 1 
HETATM 3 O O2A NAP . . . D 2 -7.496 -24.047 14.92 1 54.5 ? O2A NAP 501 C 1 
HETATM 4 O O5B NAP . . . D 2 -7.066 -21.821 13.837 1 65.5 ? O5B NAP 501 C 1 
HETATM 5 C C5B NAP . . . D 2 -6.586 -20.48 13.733 1 64.17 ? C5B NAP 501 C 1 
HETATM 6 C C4B NAP . . . D 2 -6.412 -20.208 12.246 1 65.8 ? C4B NAP 501 C 1 
HETATM 7 O O4B NAP . . . D 2 -5.501 -21.13 11.648 1 67.49 ? O4B NAP 501 C 1 
HETATM 8 C C3B NAP . . . D 2 -7.698 -20.401 11.477 1 64.11 ? C3B NAP 501 C 1 
HETATM 9 O O3B NAP . . . D 2 -8.336 -19.143 11.412 1 74.41 ? O3B NAP 501 C 1 
HETATM 10 C C2B NAP . . . D 2 -7.255 -20.906 10.128 1 64.61 ? C2B NAP 501 C 1 
HETATM 11 O O2B NAP . . . D 2 -7.031 -19.839 9.234 1 68.22 ? O2B NAP 501 C 1 
HETATM 12 C C1B NAP . . . D 2 -5.897 -21.504 10.328 1 64.19 ? C1B NAP 501 C 1 
HETATM 13 N N9A NAP . . . D 2 -5.95 -22.965 10.121 1 66.38 ? N9A NAP 501 C 1 
HETATM 14 C C8A NAP . . . D 2 -6.085 -23.911 11.062 1 71.17 ? C8A NAP 501 C 1 
HETATM 15 N N7A NAP . . . D 2 -6.088 -25.16 10.527 1 70.29 ? N7A NAP 501 C 1 
HETATM 16 C C5A NAP . . . D 2 -5.939 -25.007 9.222 1 68.07 ? C5A NAP 501 C 1 
HETATM 17 C C6A NAP . . . D 2 -5.841 -25.925 8.085 1 76.66 ? C6A NAP 501 C 1 
HETATM 18 N N6A NAP . . . D 2 -5.918 -27.262 8.276 1 79.66 ? N6A NAP 501 C 1 
HETATM 19 N N1A NAP . . . D 2 -5.694 -25.371 6.86 1 76.01 ? N1A NAP 501 C 1 
HETATM 20 C C2A NAP . . . D 2 -5.618 -24.033 6.686 1 74.71 ? C2A NAP 501 C 1 
HETATM 21 N N3A NAP . . . D 2 -5.693 -23.149 7.7 1 68.49 ? N3A NAP 501 C 1 
HETATM 22 C C4A NAP . . . D 2 -5.849 -23.571 8.958 1 64.78 ? C4A NAP 501 C 1 
HETATM 23 O O3 NAP . . . D 2 -6.488 -22.107 16.192 1 57.64 ? O3 NAP 501 C 1 
HETATM 24 P PN NAP . . . D 2 -7.912 -21.649 16.832 1 60.37 ? PN NAP 501 C 1 
HETATM 25 O O1N NAP . . . D 2 -7.633 -20.664 17.974 1 57.54 ? O1N NAP 501 C 1 
HETATM 26 O O2N NAP . . . D 2 -8.917 -21.324 15.73 1 59.04 ? O2N NAP 501 C 1 
HETATM 27 O O5D NAP . . . D 2 -8.38 -23.032 17.5 1 58.67 ? O5D NAP 501 C 1 
HETATM 28 C C5D NAP . . . D 2 -9.694 -23.57 17.408 1 61.18 ? C5D NAP 501 C 1 
HETATM 29 C C4D NAP . . . D 2 -9.841 -24.638 18.494 1 61.72 ? C4D NAP 501 C 1 
HETATM 30 O O4D NAP . . . D 2 -8.75 -25.592 18.542 1 63.13 ? O4D NAP 501 C 1 
HETATM 31 C C3D NAP . . . D 2 -9.885 -23.966 19.854 1 59.17 ? C3D NAP 501 C 1 
HETATM 32 O O3D NAP . . . D 2 -11.195 -24.07 20.402 1 53.43 ? O3D NAP 501 C 1 
HETATM 33 C C2D NAP . . . D 2 -8.812 -24.673 20.681 1 62.3 ? C2D NAP 501 C 1 
HETATM 34 O O2D NAP . . . D 2 -9.244 -24.983 22.012 1 62.78 ? O2D NAP 501 C 1 
HETATM 35 C C1D NAP . . . D 2 -8.426 -25.935 19.908 1 65.09 ? C1D NAP 501 C 1 
HETATM 36 N N1N NAP . . . D 2 -7.013 -26.355 20.14 1 71.41 ? N1N NAP 501 C 1 
HETATM 37 C C2N NAP . . . D 2 -6.451 -26.257 21.368 1 79.26 ? C2N NAP 501 C 1 
HETATM 38 C C3N NAP . . . D 2 -5.128 -26.646 21.614 1 84.94 ? C3N NAP 501 C 1 
HETATM 39 C C7N NAP . . . D 2 -4.593 -26.489 23.022 1 85.89 ? C7N NAP 501 C 1 
HETATM 40 O O7N NAP . . . D 2 -4.843 -25.449 23.611 1 91.34 ? O7N NAP 501 C 1 
HETATM 41 N N7N NAP . . . D 2 -3.889 -27.459 23.621 1 81.72 ? N7N NAP 501 C 1 
HETATM 42 C C4N NAP . . . D 2 -4.359 -27.157 20.558 1 79.23 ? C4N NAP 501 C 1 
HETATM 43 C C5N NAP . . . D 2 -4.948 -27.265 19.301 1 72.52 ? C5N NAP 501 C 1 
HETATM 44 C C6N NAP . . . D 2 -6.273 -26.857 19.135 1 71.08 ? C6N NAP 501 C 1 
HETATM 45 P P2B NAP . . . D 2 -8.179 -19.273 8.275 1 76.66 ? P2B NAP 501 C 1 
HETATM 46 O O1X NAP . . . D 2 -9.463 -19.956 8.693 1 74.59 ? O1X NAP 501 C 1 
HETATM 47 O O2X NAP . . . D 2 -8.082 -17.808 8.679 1 56.65 ? O2X NAP 501 C 1 
HETATM 48 O O3X NAP . . . D 2 -7.759 -19.727 6.876 1 70.49 ? O3X NAP 501 C 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           45 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           1125 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           48 
#