data_6AJ8 # _model_server_result.job_id gg-BPtrJ9GE0H58VlJXqbw _model_server_result.datetime_utc '2024-12-12 20:52:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aj8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6AJ8 # _exptl.entry_id 6AJ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AJ8 _cell.length_a 58.474 _cell.length_b 112.021 _cell.length_c 132.136 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AJ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 251 A ASP 251 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc2 A O ASP 274 A ASP 274 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc3 A OD1 ASP 274 A ASP 274 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc4 A OD1 ASP 278 A ASP 278 1_555 D CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc5 D CA CA . A CA 502 1_555 B OD2 ASP 251 B ASP 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? metalc ? metalc6 D CA CA . A CA 502 1_555 I O HOH . B HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc7 E CA CA . A CA 503 1_555 B O ASP 274 B ASP 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.02 ? metalc ? metalc8 E CA CA . A CA 503 1_555 B OD1 ASP 274 B ASP 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc9 E CA CA . A CA 503 1_555 B OD2 ASP 278 B ASP 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc10 E CA CA . A CA 503 1_555 I O HOH . B HOH 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6AJ8 _atom_sites.fract_transf_matrix[1][1] 0.017102 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008927 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 501 415 NAP NAP . D 3 CA A 1 502 2 CA CA . E 3 CA A 1 503 1 CA CA . F 2 NAP B 1 501 415 NAP NAP . G 4 AKG B 1 502 1 AKG AKG . H 5 HOH A 1 601 3 HOH HOH . H 5 HOH A 2 602 64 HOH HOH . H 5 HOH A 3 603 67 HOH HOH . H 5 HOH A 4 604 56 HOH HOH . H 5 HOH A 5 605 88 HOH HOH . H 5 HOH A 6 606 16 HOH HOH . H 5 HOH A 7 607 231 HOH HOH . H 5 HOH A 8 608 152 HOH HOH . H 5 HOH A 9 609 23 HOH HOH . H 5 HOH A 10 610 154 HOH HOH . H 5 HOH A 11 611 18 HOH HOH . H 5 HOH A 12 612 28 HOH HOH . H 5 HOH A 13 613 5 HOH HOH . H 5 HOH A 14 614 26 HOH HOH . H 5 HOH A 15 615 12 HOH HOH . H 5 HOH A 16 616 130 HOH HOH . H 5 HOH A 17 617 7 HOH HOH . H 5 HOH A 18 618 78 HOH HOH . H 5 HOH A 19 619 194 HOH HOH . H 5 HOH A 20 620 163 HOH HOH . H 5 HOH A 21 621 160 HOH HOH . H 5 HOH A 22 622 36 HOH HOH . H 5 HOH A 23 623 100 HOH HOH . H 5 HOH A 24 624 149 HOH HOH . H 5 HOH A 25 625 179 HOH HOH . H 5 HOH A 26 626 29 HOH HOH . H 5 HOH A 27 627 146 HOH HOH . H 5 HOH A 28 628 84 HOH HOH . H 5 HOH A 29 629 54 HOH HOH . H 5 HOH A 30 630 220 HOH HOH . H 5 HOH A 31 631 150 HOH HOH . H 5 HOH A 32 632 17 HOH HOH . H 5 HOH A 33 633 81 HOH HOH . H 5 HOH A 34 634 44 HOH HOH . H 5 HOH A 35 635 193 HOH HOH . H 5 HOH A 36 636 13 HOH HOH . H 5 HOH A 37 637 22 HOH HOH . H 5 HOH A 38 638 167 HOH HOH . H 5 HOH A 39 639 14 HOH HOH . H 5 HOH A 40 640 80 HOH HOH . H 5 HOH A 41 641 90 HOH HOH . H 5 HOH A 42 642 25 HOH HOH . H 5 HOH A 43 643 31 HOH HOH . H 5 HOH A 44 644 89 HOH HOH . H 5 HOH A 45 645 166 HOH HOH . H 5 HOH A 46 646 114 HOH HOH . H 5 HOH A 47 647 69 HOH HOH . H 5 HOH A 48 648 38 HOH HOH . H 5 HOH A 49 649 30 HOH HOH . H 5 HOH A 50 650 221 HOH HOH . H 5 HOH A 51 651 142 HOH HOH . H 5 HOH A 52 652 191 HOH HOH . H 5 HOH A 53 653 153 HOH HOH . H 5 HOH A 54 654 106 HOH HOH . H 5 HOH A 55 655 113 HOH HOH . H 5 HOH A 56 656 233 HOH HOH . H 5 HOH A 57 657 46 HOH HOH . H 5 HOH A 58 658 85 HOH HOH . H 5 HOH A 59 659 144 HOH HOH . H 5 HOH A 60 660 105 HOH HOH . H 5 HOH A 61 661 202 HOH HOH . H 5 HOH A 62 662 184 HOH HOH . H 5 HOH A 63 663 162 HOH HOH . H 5 HOH A 64 664 87 HOH HOH . H 5 HOH A 65 665 74 HOH HOH . H 5 HOH A 66 666 216 HOH HOH . H 5 HOH A 67 667 45 HOH HOH . H 5 HOH A 68 668 86 HOH HOH . H 5 HOH A 69 669 43 HOH HOH . H 5 HOH A 70 670 57 HOH HOH . H 5 HOH A 71 671 169 HOH HOH . H 5 HOH A 72 672 19 HOH HOH . H 5 HOH A 73 673 208 HOH HOH . H 5 HOH A 74 674 197 HOH HOH . H 5 HOH A 75 675 39 HOH HOH . H 5 HOH A 76 676 164 HOH HOH . H 5 HOH A 77 677 205 HOH HOH . H 5 HOH A 78 678 59 HOH HOH . H 5 HOH A 79 679 49 HOH HOH . H 5 HOH A 80 680 215 HOH HOH . H 5 HOH A 81 681 15 HOH HOH . H 5 HOH A 82 682 212 HOH HOH . H 5 HOH A 83 683 120 HOH HOH . H 5 HOH A 84 684 207 HOH HOH . H 5 HOH A 85 685 51 HOH HOH . H 5 HOH A 86 686 158 HOH HOH . H 5 HOH A 87 687 157 HOH HOH . H 5 HOH A 88 688 55 HOH HOH . H 5 HOH A 89 689 121 HOH HOH . H 5 HOH A 90 690 126 HOH HOH . H 5 HOH A 91 691 201 HOH HOH . H 5 HOH A 92 692 76 HOH HOH . H 5 HOH A 93 693 131 HOH HOH . H 5 HOH A 94 694 10 HOH HOH . H 5 HOH A 95 695 159 HOH HOH . H 5 HOH A 96 696 192 HOH HOH . H 5 HOH A 97 697 165 HOH HOH . H 5 HOH A 98 698 118 HOH HOH . H 5 HOH A 99 699 75 HOH HOH . H 5 HOH A 100 700 155 HOH HOH . H 5 HOH A 101 701 37 HOH HOH . H 5 HOH A 102 702 104 HOH HOH . H 5 HOH A 103 703 115 HOH HOH . H 5 HOH A 104 704 222 HOH HOH . H 5 HOH A 105 705 151 HOH HOH . H 5 HOH A 106 706 58 HOH HOH . H 5 HOH A 107 707 232 HOH HOH . H 5 HOH A 108 708 198 HOH HOH . H 5 HOH A 109 709 65 HOH HOH . H 5 HOH A 110 710 176 HOH HOH . H 5 HOH A 111 711 52 HOH HOH . H 5 HOH A 112 712 117 HOH HOH . H 5 HOH A 113 713 161 HOH HOH . H 5 HOH A 114 714 204 HOH HOH . H 5 HOH A 115 715 62 HOH HOH . H 5 HOH A 116 716 40 HOH HOH . H 5 HOH A 117 717 219 HOH HOH . H 5 HOH A 118 718 196 HOH HOH . H 5 HOH A 119 719 116 HOH HOH . H 5 HOH A 120 720 203 HOH HOH . H 5 HOH A 121 721 53 HOH HOH . H 5 HOH A 122 722 112 HOH HOH . H 5 HOH A 123 723 137 HOH HOH . H 5 HOH A 124 724 70 HOH HOH . H 5 HOH A 125 725 195 HOH HOH . H 5 HOH A 126 726 200 HOH HOH . H 5 HOH A 127 727 199 HOH HOH . I 5 HOH B 1 601 6 HOH HOH . I 5 HOH B 2 602 50 HOH HOH . I 5 HOH B 3 603 11 HOH HOH . I 5 HOH B 4 604 98 HOH HOH . I 5 HOH B 5 605 168 HOH HOH . I 5 HOH B 6 606 32 HOH HOH . I 5 HOH B 7 607 229 HOH HOH . I 5 HOH B 8 609 97 HOH HOH . I 5 HOH B 9 610 68 HOH HOH . I 5 HOH B 10 611 42 HOH HOH . I 5 HOH B 11 612 41 HOH HOH . I 5 HOH B 12 613 134 HOH HOH . I 5 HOH B 13 614 143 HOH HOH . I 5 HOH B 14 615 1 HOH HOH . I 5 HOH B 15 616 102 HOH HOH . I 5 HOH B 16 617 230 HOH HOH . I 5 HOH B 17 618 173 HOH HOH . I 5 HOH B 18 619 47 HOH HOH . I 5 HOH B 19 620 109 HOH HOH . I 5 HOH B 20 621 83 HOH HOH . I 5 HOH B 21 622 227 HOH HOH . I 5 HOH B 22 623 9 HOH HOH . I 5 HOH B 23 624 223 HOH HOH . I 5 HOH B 24 625 66 HOH HOH . I 5 HOH B 25 626 175 HOH HOH . I 5 HOH B 26 627 182 HOH HOH . I 5 HOH B 27 628 27 HOH HOH . I 5 HOH B 28 629 20 HOH HOH . I 5 HOH B 29 630 174 HOH HOH . I 5 HOH B 30 631 217 HOH HOH . I 5 HOH B 31 632 190 HOH HOH . I 5 HOH B 32 633 127 HOH HOH . I 5 HOH B 33 634 156 HOH HOH . I 5 HOH B 34 635 71 HOH HOH . I 5 HOH B 35 636 111 HOH HOH . I 5 HOH B 36 637 77 HOH HOH . I 5 HOH B 37 638 187 HOH HOH . I 5 HOH B 38 639 24 HOH HOH . I 5 HOH B 39 640 93 HOH HOH . I 5 HOH B 40 641 21 HOH HOH . I 5 HOH B 41 642 60 HOH HOH . I 5 HOH B 42 643 171 HOH HOH . I 5 HOH B 43 644 170 HOH HOH . I 5 HOH B 44 645 94 HOH HOH . I 5 HOH B 45 646 125 HOH HOH . I 5 HOH B 46 647 224 HOH HOH . I 5 HOH B 47 648 73 HOH HOH . I 5 HOH B 48 649 218 HOH HOH . I 5 HOH B 49 650 92 HOH HOH . I 5 HOH B 50 651 91 HOH HOH . I 5 HOH B 51 652 135 HOH HOH . I 5 HOH B 52 653 107 HOH HOH . I 5 HOH B 53 654 172 HOH HOH . I 5 HOH B 54 655 139 HOH HOH . I 5 HOH B 55 656 211 HOH HOH . I 5 HOH B 56 657 186 HOH HOH . I 5 HOH B 57 658 132 HOH HOH . I 5 HOH B 58 659 181 HOH HOH . I 5 HOH B 59 660 82 HOH HOH . I 5 HOH B 60 661 95 HOH HOH . I 5 HOH B 61 662 228 HOH HOH . I 5 HOH B 62 663 147 HOH HOH . I 5 HOH B 63 664 225 HOH HOH . I 5 HOH B 64 665 108 HOH HOH . I 5 HOH B 65 666 180 HOH HOH . I 5 HOH B 66 667 96 HOH HOH . I 5 HOH B 67 668 119 HOH HOH . I 5 HOH B 68 669 48 HOH HOH . I 5 HOH B 69 670 34 HOH HOH . I 5 HOH B 70 671 128 HOH HOH . I 5 HOH B 71 672 35 HOH HOH . I 5 HOH B 72 673 183 HOH HOH . I 5 HOH B 73 674 188 HOH HOH . I 5 HOH B 74 675 8 HOH HOH . I 5 HOH B 75 676 177 HOH HOH . I 5 HOH B 76 677 101 HOH HOH . I 5 HOH B 77 678 178 HOH HOH . I 5 HOH B 78 679 103 HOH HOH . I 5 HOH B 79 680 129 HOH HOH . I 5 HOH B 80 681 136 HOH HOH . I 5 HOH B 81 682 185 HOH HOH . I 5 HOH B 82 683 148 HOH HOH . I 5 HOH B 83 684 209 HOH HOH . I 5 HOH B 84 685 99 HOH HOH . I 5 HOH B 85 686 145 HOH HOH . I 5 HOH B 86 687 141 HOH HOH . I 5 HOH B 87 688 63 HOH HOH . I 5 HOH B 88 689 189 HOH HOH . I 5 HOH B 89 690 110 HOH HOH . I 5 HOH B 90 691 138 HOH HOH . I 5 HOH B 91 692 4 HOH HOH . I 5 HOH B 92 693 226 HOH HOH . I 5 HOH B 93 694 140 HOH HOH . I 5 HOH B 94 695 79 HOH HOH . I 5 HOH B 95 696 123 HOH HOH . I 5 HOH B 96 697 122 HOH HOH . I 5 HOH B 97 698 72 HOH HOH . I 5 HOH B 98 699 2 HOH HOH . I 5 HOH B 99 700 213 HOH HOH . I 5 HOH B 100 701 33 HOH HOH . I 5 HOH B 101 702 210 HOH HOH . I 5 HOH B 102 703 61 HOH HOH . I 5 HOH B 103 704 133 HOH HOH . I 5 HOH B 104 705 206 HOH HOH . I 5 HOH B 105 706 214 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.307 _atom_site.Cartn_y 107.471 _atom_site.Cartn_z -44.973 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #