data_6AJJ # _model_server_result.job_id JJiIIRCqxqe-QEA5laAqug _model_server_result.datetime_utc '2024-11-01 21:27:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ajj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1008}' # _entry.id 6AJJ # _exptl.entry_id 6AJJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 346.414 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4,6-difluoro-N-(spiro[5.5]undecan-3-yl)-1H-indole-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AJJ _cell.length_a 87.386 _cell.length_b 139.731 _cell.length_c 140.713 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AJJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H24 F2 N2 O' _chem_comp.formula_weight 346.414 _chem_comp.id J9E _chem_comp.mon_nstd_flag . _chem_comp.name 4,6-difluoro-N-(spiro[5.5]undecan-3-yl)-1H-indole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F22 C21 J9E sing 171 n n C20 C21 J9E sing 172 n y C20 C18 J9E doub 173 n y C21 C23 J9E doub 174 n y F19 C18 J9E sing 175 n n C18 C17 J9E sing 176 n y C23 C24 J9E sing 177 n y C24 C17 J9E doub 178 n y C24 N25 J9E sing 179 n y C17 C16 J9E sing 180 n y N25 C15 J9E sing 181 n y C16 C15 J9E doub 182 n y C15 C02 J9E sing 183 n n C02 O01 J9E doub 184 n n C02 N03 J9E sing 185 n n N03 C04 J9E sing 186 n n C04 C05 J9E sing 187 n n C04 C14 J9E sing 188 n n C05 C06 J9E sing 189 n n C14 C13 J9E sing 190 n n C06 C07 J9E sing 191 n n C13 C07 J9E sing 192 n n C07 C08 J9E sing 193 n n C07 C12 J9E sing 194 n n C08 C09 J9E sing 195 n n C12 C11 J9E sing 196 n n C09 C10 J9E sing 197 n n C11 C10 J9E sing 198 n n C04 H1 J9E sing 199 n n C05 H2 J9E sing 200 n n C05 H3 J9E sing 201 n n C06 H4 J9E sing 202 n n C06 H5 J9E sing 203 n n C08 H6 J9E sing 204 n n C08 H7 J9E sing 205 n n C09 H8 J9E sing 206 n n C09 H9 J9E sing 207 n n C10 H10 J9E sing 208 n n C10 H11 J9E sing 209 n n C11 H12 J9E sing 210 n n C11 H13 J9E sing 211 n n C12 H14 J9E sing 212 n n C12 H15 J9E sing 213 n n C13 H16 J9E sing 214 n n C13 H17 J9E sing 215 n n C14 H18 J9E sing 216 n n C14 H19 J9E sing 217 n n C16 H20 J9E sing 218 n n C20 H21 J9E sing 219 n n C23 H22 J9E sing 220 n n N03 H23 J9E sing 221 n n N25 H24 J9E sing 222 n n # _atom_sites.entry_id 6AJJ _atom_sites.fract_transf_matrix[1][1] 0.011443 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007107 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MHA A 1 1001 1 MHA MHA . C 2 MHA A 1 1002 2 MHA MHA . D 3 L6T A 1 1003 3 L6T 6DT . E 3 L6T A 1 1004 4 L6T 6DT . F 3 L6T A 1 1005 5 L6T 6DT . G 3 L6T A 1 1006 6 L6T 6DT . H 3 L6T A 1 1007 7 L6T 6DT . I 4 J9E A 1 1008 1 J9E J9E . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 J9E . . . I 4 8.003 5.12 17.278 1 86.02 ? C02 J9E 1008 A 1 HETATM 2 C C04 J9E . . . I 4 8.078 6.432 19.309 1 79.27 ? C04 J9E 1008 A 1 HETATM 3 C C05 J9E . . . I 4 7.673 7.83 19.695 1 74.37 ? C05 J9E 1008 A 1 HETATM 4 C C06 J9E . . . I 4 8.311 8.1 21.027 1 75.38 ? C06 J9E 1008 A 1 HETATM 5 C C07 J9E . . . I 4 7.494 7.345 22.026 1 74.78 ? C07 J9E 1008 A 1 HETATM 6 C C08 J9E . . . I 4 6.233 8.118 22.287 1 68.29 ? C08 J9E 1008 A 1 HETATM 7 C C09 J9E . . . I 4 5.7 7.699 23.642 1 68.69 ? C09 J9E 1008 A 1 HETATM 8 C C10 J9E . . . I 4 6.755 7.909 24.712 1 73.23 ? C10 J9E 1008 A 1 HETATM 9 C C11 J9E . . . I 4 8.062 7.224 24.37 1 72.78 ? C11 J9E 1008 A 1 HETATM 10 C C12 J9E . . . I 4 8.559 7.698 23.027 1 73.33 ? C12 J9E 1008 A 1 HETATM 11 C C13 J9E . . . I 4 7.292 5.887 21.679 1 75.26 ? C13 J9E 1008 A 1 HETATM 12 C C14 J9E . . . I 4 7.97 5.408 20.411 1 75.96 ? C14 J9E 1008 A 1 HETATM 13 C C15 J9E . . . I 4 7.337 4.641 16.006 1 87.45 ? C15 J9E 1008 A 1 HETATM 14 C C16 J9E . . . I 4 6.268 5.216 15.37 1 85.6 ? C16 J9E 1008 A 1 HETATM 15 C C17 J9E . . . I 4 5.999 4.457 14.231 1 91.37 ? C17 J9E 1008 A 1 HETATM 16 C C18 J9E . . . I 4 5.044 4.52 13.205 1 98.52 ? C18 J9E 1008 A 1 HETATM 17 C C20 J9E . . . I 4 5.041 3.599 12.202 1 101.71 ? C20 J9E 1008 A 1 HETATM 18 C C21 J9E . . . I 4 5.991 2.61 12.218 1 107.65 ? C21 J9E 1008 A 1 HETATM 19 C C23 J9E . . . I 4 6.936 2.524 13.21 1 99.88 ? C23 J9E 1008 A 1 HETATM 20 C C24 J9E . . . I 4 6.916 3.481 14.23 1 92.42 ? C24 J9E 1008 A 1 HETATM 21 F F19 J9E . . . I 4 4.108 5.473 13.151 1 103.26 ? F19 J9E 1008 A 1 HETATM 22 F F22 J9E . . . I 4 5.98 1.702 11.227 1 116.18 ? F22 J9E 1008 A 1 HETATM 23 N N03 J9E . . . I 4 7.314 6.024 18.16 1 82.72 ? N03 J9E 1008 A 1 HETATM 24 N N25 J9E . . . I 4 7.721 3.608 15.305 1 89.95 ? N25 J9E 1008 A 1 HETATM 25 O O01 J9E . . . I 4 9.082 4.758 17.536 1 87.15 ? O01 J9E 1008 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 366 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #