data_6AJS # _model_server_result.job_id zgbf4a-VGHjjAV2EaVV2aw _model_server_result.datetime_utc '2024-11-13 09:03:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ajs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6AJS # _exptl.entry_id 6AJS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.21 _cell.angle_gamma 90 _cell.entry_id 6AJS _cell.length_a 36.229 _cell.length_b 51.393 _cell.length_c 54.444 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AJS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 24 A CYS 24 1_555 B FE3 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc2 A SG CYS 27 A CYS 27 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc3 A ND1 HIS 95 A HIS 95 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc4 A SG CYS 120 A CYS 120 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 6AJS _atom_sites.fract_transf_matrix[1][1] 0.027602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007502 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019034 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 210 SF4 SF4 . C 3 HOH A 1 401 44 HOH HOH . C 3 HOH A 2 402 140 HOH HOH . C 3 HOH A 3 403 114 HOH HOH . C 3 HOH A 4 404 141 HOH HOH . C 3 HOH A 5 405 73 HOH HOH . C 3 HOH A 6 406 185 HOH HOH . C 3 HOH A 7 407 96 HOH HOH . C 3 HOH A 8 408 175 HOH HOH . C 3 HOH A 9 409 170 HOH HOH . C 3 HOH A 10 410 127 HOH HOH . C 3 HOH A 11 411 111 HOH HOH . C 3 HOH A 12 412 26 HOH HOH . C 3 HOH A 13 413 84 HOH HOH . C 3 HOH A 14 414 43 HOH HOH . C 3 HOH A 15 415 95 HOH HOH . C 3 HOH A 16 416 49 HOH HOH . C 3 HOH A 17 417 105 HOH HOH . C 3 HOH A 18 418 173 HOH HOH . C 3 HOH A 19 419 93 HOH HOH . C 3 HOH A 20 420 194 HOH HOH . C 3 HOH A 21 421 101 HOH HOH . C 3 HOH A 22 422 176 HOH HOH . C 3 HOH A 23 423 143 HOH HOH . C 3 HOH A 24 424 107 HOH HOH . C 3 HOH A 25 425 16 HOH HOH . C 3 HOH A 26 426 60 HOH HOH . C 3 HOH A 27 427 157 HOH HOH . C 3 HOH A 28 428 135 HOH HOH . C 3 HOH A 29 429 119 HOH HOH . C 3 HOH A 30 430 189 HOH HOH . C 3 HOH A 31 431 125 HOH HOH . C 3 HOH A 32 432 208 HOH HOH . C 3 HOH A 33 433 85 HOH HOH . C 3 HOH A 34 434 74 HOH HOH . C 3 HOH A 35 435 177 HOH HOH . C 3 HOH A 36 436 21 HOH HOH . C 3 HOH A 37 437 150 HOH HOH . C 3 HOH A 38 438 112 HOH HOH . C 3 HOH A 39 439 90 HOH HOH . C 3 HOH A 40 440 97 HOH HOH . C 3 HOH A 41 441 196 HOH HOH . C 3 HOH A 42 442 115 HOH HOH . C 3 HOH A 43 443 46 HOH HOH . C 3 HOH A 44 444 47 HOH HOH . C 3 HOH A 45 445 42 HOH HOH . C 3 HOH A 46 446 161 HOH HOH . C 3 HOH A 47 447 35 HOH HOH . C 3 HOH A 48 448 136 HOH HOH . C 3 HOH A 49 449 57 HOH HOH . C 3 HOH A 50 450 39 HOH HOH . C 3 HOH A 51 451 22 HOH HOH . C 3 HOH A 52 452 168 HOH HOH . C 3 HOH A 53 453 8 HOH HOH . C 3 HOH A 54 454 203 HOH HOH . C 3 HOH A 55 455 198 HOH HOH . C 3 HOH A 56 456 13 HOH HOH . C 3 HOH A 57 457 121 HOH HOH . C 3 HOH A 58 458 94 HOH HOH . C 3 HOH A 59 459 55 HOH HOH . C 3 HOH A 60 460 103 HOH HOH . C 3 HOH A 61 461 14 HOH HOH . C 3 HOH A 62 462 144 HOH HOH . C 3 HOH A 63 463 217 HOH HOH . C 3 HOH A 64 464 120 HOH HOH . C 3 HOH A 65 465 27 HOH HOH . C 3 HOH A 66 466 56 HOH HOH . C 3 HOH A 67 467 148 HOH HOH . C 3 HOH A 68 468 2 HOH HOH . C 3 HOH A 69 469 106 HOH HOH . C 3 HOH A 70 470 77 HOH HOH . C 3 HOH A 71 471 40 HOH HOH . C 3 HOH A 72 472 118 HOH HOH . C 3 HOH A 73 473 197 HOH HOH . C 3 HOH A 74 474 1 HOH HOH . C 3 HOH A 75 475 116 HOH HOH . C 3 HOH A 76 476 48 HOH HOH . C 3 HOH A 77 477 108 HOH HOH . C 3 HOH A 78 478 156 HOH HOH . C 3 HOH A 79 479 29 HOH HOH . C 3 HOH A 80 480 79 HOH HOH . C 3 HOH A 81 481 129 HOH HOH . C 3 HOH A 82 482 206 HOH HOH . C 3 HOH A 83 483 187 HOH HOH . C 3 HOH A 84 484 210 HOH HOH . C 3 HOH A 85 485 58 HOH HOH . C 3 HOH A 86 486 59 HOH HOH . C 3 HOH A 87 487 37 HOH HOH . C 3 HOH A 88 488 160 HOH HOH . C 3 HOH A 89 489 51 HOH HOH . C 3 HOH A 90 490 25 HOH HOH . C 3 HOH A 91 491 75 HOH HOH . C 3 HOH A 92 492 158 HOH HOH . C 3 HOH A 93 493 80 HOH HOH . C 3 HOH A 94 494 211 HOH HOH . C 3 HOH A 95 495 18 HOH HOH . C 3 HOH A 96 496 52 HOH HOH . C 3 HOH A 97 497 183 HOH HOH . C 3 HOH A 98 498 67 HOH HOH . C 3 HOH A 99 499 41 HOH HOH . C 3 HOH A 100 500 159 HOH HOH . C 3 HOH A 101 501 9 HOH HOH . C 3 HOH A 102 502 154 HOH HOH . C 3 HOH A 103 503 15 HOH HOH . C 3 HOH A 104 504 188 HOH HOH . C 3 HOH A 105 505 82 HOH HOH . C 3 HOH A 106 506 76 HOH HOH . C 3 HOH A 107 507 64 HOH HOH . C 3 HOH A 108 508 30 HOH HOH . C 3 HOH A 109 509 133 HOH HOH . C 3 HOH A 110 510 130 HOH HOH . C 3 HOH A 111 511 10 HOH HOH . C 3 HOH A 112 512 6 HOH HOH . C 3 HOH A 113 513 89 HOH HOH . C 3 HOH A 114 514 34 HOH HOH . C 3 HOH A 115 515 36 HOH HOH . C 3 HOH A 116 516 65 HOH HOH . C 3 HOH A 117 517 19 HOH HOH . C 3 HOH A 118 518 145 HOH HOH . C 3 HOH A 119 519 151 HOH HOH . C 3 HOH A 120 520 3 HOH HOH . C 3 HOH A 121 521 87 HOH HOH . C 3 HOH A 122 522 50 HOH HOH . C 3 HOH A 123 523 7 HOH HOH . C 3 HOH A 124 524 98 HOH HOH . C 3 HOH A 125 525 213 HOH HOH . C 3 HOH A 126 526 123 HOH HOH . C 3 HOH A 127 527 162 HOH HOH . C 3 HOH A 128 528 11 HOH HOH . C 3 HOH A 129 529 124 HOH HOH . C 3 HOH A 130 530 128 HOH HOH . C 3 HOH A 131 531 195 HOH HOH . C 3 HOH A 132 532 113 HOH HOH . C 3 HOH A 133 533 149 HOH HOH . C 3 HOH A 134 534 153 HOH HOH . C 3 HOH A 135 535 38 HOH HOH . C 3 HOH A 136 536 132 HOH HOH . C 3 HOH A 137 537 69 HOH HOH . C 3 HOH A 138 538 45 HOH HOH . C 3 HOH A 139 539 5 HOH HOH . C 3 HOH A 140 540 83 HOH HOH . C 3 HOH A 141 541 20 HOH HOH . C 3 HOH A 142 542 91 HOH HOH . C 3 HOH A 143 543 174 HOH HOH . C 3 HOH A 144 544 23 HOH HOH . C 3 HOH A 145 545 122 HOH HOH . C 3 HOH A 146 546 102 HOH HOH . C 3 HOH A 147 547 137 HOH HOH . C 3 HOH A 148 548 117 HOH HOH . C 3 HOH A 149 549 186 HOH HOH . C 3 HOH A 150 550 12 HOH HOH . C 3 HOH A 151 551 28 HOH HOH . C 3 HOH A 152 552 32 HOH HOH . C 3 HOH A 153 553 63 HOH HOH . C 3 HOH A 154 554 86 HOH HOH . C 3 HOH A 155 555 61 HOH HOH . C 3 HOH A 156 556 33 HOH HOH . C 3 HOH A 157 557 66 HOH HOH . C 3 HOH A 158 558 53 HOH HOH . C 3 HOH A 159 559 142 HOH HOH . C 3 HOH A 160 560 88 HOH HOH . C 3 HOH A 161 561 62 HOH HOH . C 3 HOH A 162 562 191 HOH HOH . C 3 HOH A 163 563 68 HOH HOH . C 3 HOH A 164 564 104 HOH HOH . C 3 HOH A 165 565 4 HOH HOH . C 3 HOH A 166 566 92 HOH HOH . C 3 HOH A 167 567 24 HOH HOH . C 3 HOH A 168 568 100 HOH HOH . C 3 HOH A 169 569 138 HOH HOH . C 3 HOH A 170 570 171 HOH HOH . C 3 HOH A 171 571 164 HOH HOH . C 3 HOH A 172 572 169 HOH HOH . C 3 HOH A 173 573 17 HOH HOH . C 3 HOH A 174 574 199 HOH HOH . C 3 HOH A 175 575 71 HOH HOH . C 3 HOH A 176 576 202 HOH HOH . C 3 HOH A 177 577 172 HOH HOH . C 3 HOH A 178 578 167 HOH HOH . C 3 HOH A 179 579 205 HOH HOH . C 3 HOH A 180 580 147 HOH HOH . C 3 HOH A 181 581 212 HOH HOH . C 3 HOH A 182 582 126 HOH HOH . C 3 HOH A 183 583 204 HOH HOH . C 3 HOH A 184 584 31 HOH HOH . C 3 HOH A 185 585 110 HOH HOH . C 3 HOH A 186 586 209 HOH HOH . C 3 HOH A 187 587 146 HOH HOH . C 3 HOH A 188 588 178 HOH HOH . C 3 HOH A 189 589 215 HOH HOH . C 3 HOH A 190 590 180 HOH HOH . C 3 HOH A 191 591 200 HOH HOH . C 3 HOH A 192 592 193 HOH HOH . C 3 HOH A 193 593 207 HOH HOH . C 3 HOH A 194 594 81 HOH HOH . C 3 HOH A 195 595 155 HOH HOH . C 3 HOH A 196 596 72 HOH HOH . C 3 HOH A 197 597 109 HOH HOH . C 3 HOH A 198 598 192 HOH HOH . C 3 HOH A 199 599 78 HOH HOH . C 3 HOH A 200 600 179 HOH HOH . C 3 HOH A 201 601 201 HOH HOH . C 3 HOH A 202 602 134 HOH HOH . C 3 HOH A 203 603 163 HOH HOH . C 3 HOH A 204 604 152 HOH HOH . C 3 HOH A 205 605 139 HOH HOH . C 3 HOH A 206 606 166 HOH HOH . C 3 HOH A 207 607 182 HOH HOH . C 3 HOH A 208 608 99 HOH HOH . C 3 HOH A 209 609 190 HOH HOH . C 3 HOH A 210 610 131 HOH HOH . C 3 HOH A 211 611 70 HOH HOH . C 3 HOH A 212 612 214 HOH HOH . C 3 HOH A 213 613 181 HOH HOH . C 3 HOH A 214 614 184 HOH HOH . C 3 HOH A 215 615 165 HOH HOH . C 3 HOH A 216 616 216 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 -9.854 0.447 -18.624 1 15.99 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . . . B 2 -9.049 2.999 -18.551 1 17.04 ? FE2 SF4 301 A 1 HETATM 3 FE FE3 SF4 . . . B 2 -8.45 1.396 -20.671 1 16.37 ? FE3 SF4 301 A 1 HETATM 4 FE FE4 SF4 . . . B 2 -7.286 1.079 -18.306 1 17.18 ? FE4 SF4 301 A 1 HETATM 5 S S1 SF4 . . . B 2 -7.063 2.935 -19.668 1 17.22 ? S1 SF4 301 A 1 HETATM 6 S S2 SF4 . . . B 2 -8.106 -0.614 -19.614 1 15.82 ? S2 SF4 301 A 1 HETATM 7 S S3 SF4 . . . B 2 -8.939 1.491 -16.828 1 15.59 ? S3 SF4 301 A 1 HETATM 8 S S4 SF4 . . . B 2 -10.498 2.12 -20.065 1 16.61 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #