data_6AJY # _model_server_result.job_id AI5SiXwnXn0JF_FWmjxSvw _model_server_result.datetime_utc '2024-10-19 03:45:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ajy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AJY # _exptl.entry_id 6AJY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 270.28 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2',4'-dihydroxy-2-methoxychalcone" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AJY _cell.length_a 33.75 _cell.length_b 47.085 _cell.length_c 78.014 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 32 A TYR 65 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc2 A O TYR 104 A TYR 137 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc3 A O ILE 105 A ILE 138 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc4 A O ASN 107 A ASN 140 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc5 A O LYS 127 A LYS 160 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 A OE1 GLU 130 A GLU 163 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc7 A O GLU 130 A GLU 163 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc8 C NA NA . A NA 202 1_555 E O HOH . A HOH 314 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc9 D NA NA . A NA 203 1_555 E O HOH . A HOH 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc10 D NA NA . A NA 203 1_555 E O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc11 D NA NA . A NA 203 1_555 E O HOH . A HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? # _chem_comp.formula 'C16 H14 O4' _chem_comp.formula_weight 270.28 _chem_comp.id A0R _chem_comp.mon_nstd_flag . _chem_comp.name "2',4'-dihydroxy-2-methoxychalcone" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAM CAL A0R doub 1 n y CAM CAO A0R sing 2 n y CAL CAN A0R sing 3 n y CAO CAP A0R doub 4 n y CAT OAS A0R sing 5 n n CAN OAS A0R sing 6 n n CAN CAK A0R doub 7 n y CAP CAK A0R sing 8 n y CAK CAI A0R sing 9 n n CAI CAH A0R doub 10 e n CAH CAG A0R sing 11 n n CAG OAJ A0R doub 12 n n CAG CAA A0R sing 13 n n CAB CAA A0R doub 14 n y CAB CAD A0R sing 15 n y CAA CAC A0R sing 16 n y CAD CAF A0R doub 17 n y CAC OAQ A0R sing 18 n n CAC CAE A0R doub 19 n y CAF CAE A0R sing 20 n y CAF OAR A0R sing 21 n n CAT H1 A0R sing 22 n n CAT H2 A0R sing 23 n n CAT H3 A0R sing 24 n n CAL H4 A0R sing 25 n n CAM H5 A0R sing 26 n n CAO H6 A0R sing 27 n n CAP H7 A0R sing 28 n n CAI H8 A0R sing 29 n n CAH H10 A0R sing 30 n n CAB H12 A0R sing 31 n n CAD H13 A0R sing 32 n n OAR H14 A0R sing 33 n n CAE H15 A0R sing 34 n n OAQ H16 A0R sing 35 n n # _atom_sites.entry_id 6AJY _atom_sites.fract_transf_matrix[1][1] 0.02963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021238 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012818 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A0R A 1 201 201 A0R DRG . C 3 NA A 1 202 1 NA NA . D 3 NA A 1 203 1 NA NA . E 4 HOH A 1 301 83 HOH HOH . E 4 HOH A 2 302 88 HOH HOH . E 4 HOH A 3 303 89 HOH HOH . E 4 HOH A 4 304 45 HOH HOH . E 4 HOH A 5 305 14 HOH HOH . E 4 HOH A 6 306 46 HOH HOH . E 4 HOH A 7 307 64 HOH HOH . E 4 HOH A 8 308 57 HOH HOH . E 4 HOH A 9 309 79 HOH HOH . E 4 HOH A 10 310 10 HOH HOH . E 4 HOH A 11 311 63 HOH HOH . E 4 HOH A 12 312 24 HOH HOH . E 4 HOH A 13 313 34 HOH HOH . E 4 HOH A 14 314 19 HOH HOH . E 4 HOH A 15 315 6 HOH HOH . E 4 HOH A 16 316 17 HOH HOH . E 4 HOH A 17 317 86 HOH HOH . E 4 HOH A 18 318 12 HOH HOH . E 4 HOH A 19 319 35 HOH HOH . E 4 HOH A 20 320 21 HOH HOH . E 4 HOH A 21 321 58 HOH HOH . E 4 HOH A 22 322 38 HOH HOH . E 4 HOH A 23 323 90 HOH HOH . E 4 HOH A 24 324 29 HOH HOH . E 4 HOH A 25 325 28 HOH HOH . E 4 HOH A 26 326 18 HOH HOH . E 4 HOH A 27 327 53 HOH HOH . E 4 HOH A 28 328 73 HOH HOH . E 4 HOH A 29 329 60 HOH HOH . E 4 HOH A 30 330 23 HOH HOH . E 4 HOH A 31 331 22 HOH HOH . E 4 HOH A 32 332 9 HOH HOH . E 4 HOH A 33 333 1 HOH HOH . E 4 HOH A 34 334 47 HOH HOH . E 4 HOH A 35 335 2 HOH HOH . E 4 HOH A 36 336 52 HOH HOH . E 4 HOH A 37 337 67 HOH HOH . E 4 HOH A 38 338 4 HOH HOH . E 4 HOH A 39 339 37 HOH HOH . E 4 HOH A 40 340 55 HOH HOH . E 4 HOH A 41 341 26 HOH HOH . E 4 HOH A 42 342 65 HOH HOH . E 4 HOH A 43 343 81 HOH HOH . E 4 HOH A 44 344 91 HOH HOH . E 4 HOH A 45 345 8 HOH HOH . E 4 HOH A 46 346 48 HOH HOH . E 4 HOH A 47 347 36 HOH HOH . E 4 HOH A 48 348 84 HOH HOH . E 4 HOH A 49 349 11 HOH HOH . E 4 HOH A 50 350 13 HOH HOH . E 4 HOH A 51 351 43 HOH HOH . E 4 HOH A 52 352 3 HOH HOH . E 4 HOH A 53 353 68 HOH HOH . E 4 HOH A 54 354 85 HOH HOH . E 4 HOH A 55 355 16 HOH HOH . E 4 HOH A 56 356 69 HOH HOH . E 4 HOH A 57 357 30 HOH HOH . E 4 HOH A 58 358 27 HOH HOH . E 4 HOH A 59 359 20 HOH HOH . E 4 HOH A 60 360 5 HOH HOH . E 4 HOH A 61 361 15 HOH HOH . E 4 HOH A 62 362 25 HOH HOH . E 4 HOH A 63 363 70 HOH HOH . E 4 HOH A 64 364 32 HOH HOH . E 4 HOH A 65 365 49 HOH HOH . E 4 HOH A 66 366 39 HOH HOH . E 4 HOH A 67 367 74 HOH HOH . E 4 HOH A 68 368 31 HOH HOH . E 4 HOH A 69 369 78 HOH HOH . E 4 HOH A 70 370 40 HOH HOH . E 4 HOH A 71 371 42 HOH HOH . E 4 HOH A 72 372 7 HOH HOH . E 4 HOH A 73 373 61 HOH HOH . E 4 HOH A 74 374 54 HOH HOH . E 4 HOH A 75 375 56 HOH HOH . E 4 HOH A 76 376 59 HOH HOH . E 4 HOH A 77 377 62 HOH HOH . E 4 HOH A 78 378 87 HOH HOH . E 4 HOH A 79 379 66 HOH HOH . E 4 HOH A 80 380 44 HOH HOH . E 4 HOH A 81 381 41 HOH HOH . E 4 HOH A 82 382 71 HOH HOH . E 4 HOH A 83 383 33 HOH HOH . E 4 HOH A 84 384 77 HOH HOH . E 4 HOH A 85 385 76 HOH HOH . E 4 HOH A 86 386 80 HOH HOH . E 4 HOH A 87 387 50 HOH HOH . E 4 HOH A 88 388 82 HOH HOH . E 4 HOH A 89 389 51 HOH HOH . E 4 HOH A 90 390 92 HOH HOH . E 4 HOH A 91 391 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAT A0R . . . B 2 -13.089 8.303 -3.528 1 60.9 ? CAT A0R 201 A 1 HETATM 2 O OAS A0R . . . B 2 -12.027 7.834 -2.681 1 59.31 ? OAS A0R 201 A 1 HETATM 3 C CAN A0R . . . B 2 -10.997 7.29 -3.4 1 58.84 ? CAN A0R 201 A 1 HETATM 4 C CAL A0R . . . B 2 -11.017 7.19 -4.791 1 60.05 ? CAL A0R 201 A 1 HETATM 5 C CAM A0R . . . B 2 -9.936 6.626 -5.462 1 60.02 ? CAM A0R 201 A 1 HETATM 6 C CAO A0R . . . B 2 -8.84 6.164 -4.739 1 56.38 ? CAO A0R 201 A 1 HETATM 7 C CAP A0R . . . B 2 -8.824 6.267 -3.349 1 54.64 ? CAP A0R 201 A 1 HETATM 8 C CAK A0R . . . B 2 -9.898 6.838 -2.668 1 50.8 ? CAK A0R 201 A 1 HETATM 9 C CAI A0R . . . B 2 -9.901 6.924 -1.274 1 38.06 ? CAI A0R 201 A 1 HETATM 10 C CAH A0R . . . B 2 -8.613 7.33 -0.55 1 33 ? CAH A0R 201 A 1 HETATM 11 C CAG A0R . . . B 2 -8.782 7.324 0.977 1 44.12 ? CAG A0R 201 A 1 HETATM 12 O OAJ A0R . . . B 2 -9.861 7.01 1.475 1 55.78 ? OAJ A0R 201 A 1 HETATM 13 C CAA A0R . . . B 2 -7.714 7.755 1.771 1 48.23 ? CAA A0R 201 A 1 HETATM 14 C CAB A0R . . . B 2 -6.411 7.782 1.281 1 46.16 ? CAB A0R 201 A 1 HETATM 15 C CAD A0R . . . B 2 -5.374 8.228 2.1 1 48.63 ? CAD A0R 201 A 1 HETATM 16 C CAF A0R . . . B 2 -5.628 8.658 3.407 1 48.01 ? CAF A0R 201 A 1 HETATM 17 O OAR A0R . . . B 2 -4.614 9.093 4.202 1 41.41 ? OAR A0R 201 A 1 HETATM 18 C CAE A0R . . . B 2 -6.925 8.645 3.904 1 42.22 ? CAE A0R 201 A 1 HETATM 19 C CAC A0R . . . B 2 -7.949 8.196 3.082 1 47.76 ? CAC A0R 201 A 1 HETATM 20 O OAQ A0R . . . B 2 -9.228 8.168 3.533 1 47.92 ? OAQ A0R 201 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #