data_6AJY
#
_model_server_result.job_id            PvbX8SwL0NT0jkwoxPwl7w 
_model_server_result.datetime_utc      '2024-11-30 12:35:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ajy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    6AJY 
#
_exptl.entry_id    6AJY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AJY 
_cell.length_a            33.75 
_cell.length_b            47.085 
_cell.length_c            78.014 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AJY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 32 A TYR 65 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc2 A O TYR 104 A TYR 137 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? 
metalc ? metalc3 A O ILE 105 A ILE 138 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc4 A O ASN 107 A ASN 140 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc5 A O LYS 127 A LYS 160 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc6 A OE1 GLU 130 A GLU 163 1_555 C NA NA . A NA 202 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? 
metalc ? metalc7 A O GLU 130 A GLU 163 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc8 C NA NA . A NA 202 1_555 E O HOH . A HOH 314 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc9 D NA NA . A NA 203 1_555 E O HOH . A HOH 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc10 D NA NA . A NA 203 1_555 E O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? 
metalc ? metalc11 D NA NA . A NA 203 1_555 E O HOH . A HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6AJY 
_atom_sites.fract_transf_matrix[1][1]    0.02963 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021238 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012818 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A0R A 1 201 201 A0R DRG . 
C 3 NA A 1 202 1 NA NA . 
D 3 NA A 1 203 1 NA NA . 
E 4 HOH A 1 301 83 HOH HOH . 
E 4 HOH A 2 302 88 HOH HOH . 
E 4 HOH A 3 303 89 HOH HOH . 
E 4 HOH A 4 304 45 HOH HOH . 
E 4 HOH A 5 305 14 HOH HOH . 
E 4 HOH A 6 306 46 HOH HOH . 
E 4 HOH A 7 307 64 HOH HOH . 
E 4 HOH A 8 308 57 HOH HOH . 
E 4 HOH A 9 309 79 HOH HOH . 
E 4 HOH A 10 310 10 HOH HOH . 
E 4 HOH A 11 311 63 HOH HOH . 
E 4 HOH A 12 312 24 HOH HOH . 
E 4 HOH A 13 313 34 HOH HOH . 
E 4 HOH A 14 314 19 HOH HOH . 
E 4 HOH A 15 315 6 HOH HOH . 
E 4 HOH A 16 316 17 HOH HOH . 
E 4 HOH A 17 317 86 HOH HOH . 
E 4 HOH A 18 318 12 HOH HOH . 
E 4 HOH A 19 319 35 HOH HOH . 
E 4 HOH A 20 320 21 HOH HOH . 
E 4 HOH A 21 321 58 HOH HOH . 
E 4 HOH A 22 322 38 HOH HOH . 
E 4 HOH A 23 323 90 HOH HOH . 
E 4 HOH A 24 324 29 HOH HOH . 
E 4 HOH A 25 325 28 HOH HOH . 
E 4 HOH A 26 326 18 HOH HOH . 
E 4 HOH A 27 327 53 HOH HOH . 
E 4 HOH A 28 328 73 HOH HOH . 
E 4 HOH A 29 329 60 HOH HOH . 
E 4 HOH A 30 330 23 HOH HOH . 
E 4 HOH A 31 331 22 HOH HOH . 
E 4 HOH A 32 332 9 HOH HOH . 
E 4 HOH A 33 333 1 HOH HOH . 
E 4 HOH A 34 334 47 HOH HOH . 
E 4 HOH A 35 335 2 HOH HOH . 
E 4 HOH A 36 336 52 HOH HOH . 
E 4 HOH A 37 337 67 HOH HOH . 
E 4 HOH A 38 338 4 HOH HOH . 
E 4 HOH A 39 339 37 HOH HOH . 
E 4 HOH A 40 340 55 HOH HOH . 
E 4 HOH A 41 341 26 HOH HOH . 
E 4 HOH A 42 342 65 HOH HOH . 
E 4 HOH A 43 343 81 HOH HOH . 
E 4 HOH A 44 344 91 HOH HOH . 
E 4 HOH A 45 345 8 HOH HOH . 
E 4 HOH A 46 346 48 HOH HOH . 
E 4 HOH A 47 347 36 HOH HOH . 
E 4 HOH A 48 348 84 HOH HOH . 
E 4 HOH A 49 349 11 HOH HOH . 
E 4 HOH A 50 350 13 HOH HOH . 
E 4 HOH A 51 351 43 HOH HOH . 
E 4 HOH A 52 352 3 HOH HOH . 
E 4 HOH A 53 353 68 HOH HOH . 
E 4 HOH A 54 354 85 HOH HOH . 
E 4 HOH A 55 355 16 HOH HOH . 
E 4 HOH A 56 356 69 HOH HOH . 
E 4 HOH A 57 357 30 HOH HOH . 
E 4 HOH A 58 358 27 HOH HOH . 
E 4 HOH A 59 359 20 HOH HOH . 
E 4 HOH A 60 360 5 HOH HOH . 
E 4 HOH A 61 361 15 HOH HOH . 
E 4 HOH A 62 362 25 HOH HOH . 
E 4 HOH A 63 363 70 HOH HOH . 
E 4 HOH A 64 364 32 HOH HOH . 
E 4 HOH A 65 365 49 HOH HOH . 
E 4 HOH A 66 366 39 HOH HOH . 
E 4 HOH A 67 367 74 HOH HOH . 
E 4 HOH A 68 368 31 HOH HOH . 
E 4 HOH A 69 369 78 HOH HOH . 
E 4 HOH A 70 370 40 HOH HOH . 
E 4 HOH A 71 371 42 HOH HOH . 
E 4 HOH A 72 372 7 HOH HOH . 
E 4 HOH A 73 373 61 HOH HOH . 
E 4 HOH A 74 374 54 HOH HOH . 
E 4 HOH A 75 375 56 HOH HOH . 
E 4 HOH A 76 376 59 HOH HOH . 
E 4 HOH A 77 377 62 HOH HOH . 
E 4 HOH A 78 378 87 HOH HOH . 
E 4 HOH A 79 379 66 HOH HOH . 
E 4 HOH A 80 380 44 HOH HOH . 
E 4 HOH A 81 381 41 HOH HOH . 
E 4 HOH A 82 382 71 HOH HOH . 
E 4 HOH A 83 383 33 HOH HOH . 
E 4 HOH A 84 384 77 HOH HOH . 
E 4 HOH A 85 385 76 HOH HOH . 
E 4 HOH A 86 386 80 HOH HOH . 
E 4 HOH A 87 387 50 HOH HOH . 
E 4 HOH A 88 388 82 HOH HOH . 
E 4 HOH A 89 389 51 HOH HOH . 
E 4 HOH A 90 390 92 HOH HOH . 
E 4 HOH A 91 391 75 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -23.1 
_atom_site.Cartn_y               2.568 
_atom_site.Cartn_z               -3.098 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        31.98 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#