data_6ALA # _model_server_result.job_id 55SeuPhWafo-kIpAWAs0kw _model_server_result.datetime_utc '2024-12-01 20:47:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ala # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1005}' # _entry.id 6ALA # _exptl.entry_id 6ALA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 128.74 _cell.angle_gamma 90 _cell.entry_id 6ALA _cell.length_a 171.37 _cell.length_b 52.462 _cell.length_c 116.457 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ALA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,T 1 1 B,L,M,N,O,P,Q,R,S,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 37 A CYS 81 1_555 A SG CYS 82 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf2 A SG CYS 70 A CYS 114 1_555 A SG CYS 87 A CYS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf3 A SG CYS 183 A CYS 227 1_555 A SG CYS 290 A CYS 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf4 A SG CYS 249 A CYS 293 1_555 A SG CYS 271 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf5 B SG CYS 37 C CYS 81 1_555 B SG CYS 82 C CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf6 B SG CYS 70 C CYS 114 1_555 B SG CYS 87 C CYS 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? disulf ? disulf7 B SG CYS 183 C CYS 227 1_555 B SG CYS 290 C CYS 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf8 B SG CYS 249 C CYS 293 1_555 B SG CYS 271 C CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc1 A NE2 HIS 63 A HIS 107 1_555 C CU CU . A CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc2 A NE2 HIS 198 A HIS 242 1_555 C CU CU . A CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 A NE2 HIS 200 A HIS 244 1_555 C CU CU . A CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc4 C CU CU . A CU 1001 1_555 D OB1 FLC . A FLC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc5 C CU CU . A CU 1001 1_555 D OHB FLC . A FLC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc6 B NE2 HIS 63 C HIS 107 1_555 L CU CU . C CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc7 B NE2 HIS 198 C HIS 242 1_555 L CU CU . C CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc8 B NE2 HIS 200 C HIS 244 1_555 L CU CU . C CU 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc9 L CU CU . C CU 1001 1_555 M OA2 FLC . C FLC 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 146 n n C1 C2 GOL sing 147 n n C1 H11 GOL sing 148 n n C1 H12 GOL sing 149 n n O1 HO1 GOL sing 150 n n C2 O2 GOL sing 151 n n C2 C3 GOL sing 152 n n C2 H2 GOL sing 153 n n O2 HO2 GOL sing 154 n n C3 O3 GOL sing 155 n n C3 H31 GOL sing 156 n n C3 H32 GOL sing 157 n n O3 HO3 GOL sing 158 n n # _atom_sites.entry_id 6ALA _atom_sites.fract_transf_matrix[1][1] 0.005835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004682 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019061 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011009 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CU A 1 1001 401 CU CU . D 3 FLC A 1 1002 402 FLC FLC . E 4 GOL A 1 1003 1 GOL GOL . F 4 GOL A 1 1004 2 GOL GOL . G 4 GOL A 1 1005 3 GOL GOL . H 4 GOL A 1 1006 5 GOL GOL . I 4 GOL A 1 1007 11 GOL GOL . J 4 GOL A 1 1008 12 GOL GOL . K 4 GOL A 1 1009 13 GOL GOL . L 2 CU C 1 1001 401 CU CU . M 3 FLC C 1 1002 402 FLC FLC . N 4 GOL C 1 1003 4 GOL GOL . O 4 GOL C 1 1004 6 GOL GOL . P 4 GOL C 1 1005 7 GOL GOL . Q 4 GOL C 1 1006 8 GOL GOL . R 4 GOL C 1 1007 9 GOL GOL . S 4 GOL C 1 1008 10 GOL GOL . T 5 HOH A 1 1101 152 HOH HOH . T 5 HOH A 2 1102 164 HOH HOH . T 5 HOH A 3 1103 148 HOH HOH . T 5 HOH A 4 1104 150 HOH HOH . T 5 HOH A 5 1105 18 HOH HOH . T 5 HOH A 6 1106 94 HOH HOH . T 5 HOH A 7 1107 16 HOH HOH . T 5 HOH A 8 1108 13 HOH HOH . T 5 HOH A 9 1109 142 HOH HOH . T 5 HOH A 10 1110 113 HOH HOH . T 5 HOH A 11 1111 144 HOH HOH . T 5 HOH A 12 1112 140 HOH HOH . T 5 HOH A 13 1113 99 HOH HOH . T 5 HOH A 14 1114 155 HOH HOH . T 5 HOH A 15 1115 96 HOH HOH . T 5 HOH A 16 1116 25 HOH HOH . T 5 HOH A 17 1117 31 HOH HOH . T 5 HOH A 18 1118 165 HOH HOH . T 5 HOH A 19 1119 41 HOH HOH . T 5 HOH A 20 1120 141 HOH HOH . T 5 HOH A 21 1121 136 HOH HOH . T 5 HOH A 22 1122 98 HOH HOH . T 5 HOH A 23 1123 23 HOH HOH . T 5 HOH A 24 1124 5 HOH HOH . T 5 HOH A 25 1125 127 HOH HOH . T 5 HOH A 26 1126 168 HOH HOH . T 5 HOH A 27 1127 12 HOH HOH . T 5 HOH A 28 1128 147 HOH HOH . T 5 HOH A 29 1129 119 HOH HOH . T 5 HOH A 30 1130 118 HOH HOH . T 5 HOH A 31 1131 122 HOH HOH . T 5 HOH A 32 1132 1 HOH HOH . T 5 HOH A 33 1133 115 HOH HOH . T 5 HOH A 34 1134 114 HOH HOH . T 5 HOH A 35 1135 97 HOH HOH . T 5 HOH A 36 1136 153 HOH HOH . T 5 HOH A 37 1137 116 HOH HOH . T 5 HOH A 38 1138 120 HOH HOH . T 5 HOH A 39 1139 15 HOH HOH . T 5 HOH A 40 1140 95 HOH HOH . T 5 HOH A 41 1141 135 HOH HOH . T 5 HOH A 42 1142 38 HOH HOH . T 5 HOH A 43 1143 30 HOH HOH . T 5 HOH A 44 1144 2 HOH HOH . T 5 HOH A 45 1145 126 HOH HOH . T 5 HOH A 46 1146 29 HOH HOH . T 5 HOH A 47 1147 170 HOH HOH . T 5 HOH A 48 1148 44 HOH HOH . T 5 HOH A 49 1149 128 HOH HOH . T 5 HOH A 50 1150 161 HOH HOH . T 5 HOH A 51 1151 151 HOH HOH . T 5 HOH A 52 1152 36 HOH HOH . T 5 HOH A 53 1153 26 HOH HOH . T 5 HOH A 54 1154 146 HOH HOH . T 5 HOH A 55 1155 11 HOH HOH . T 5 HOH A 56 1156 3 HOH HOH . T 5 HOH A 57 1157 40 HOH HOH . T 5 HOH A 58 1158 167 HOH HOH . T 5 HOH A 59 1159 160 HOH HOH . T 5 HOH A 60 1160 21 HOH HOH . T 5 HOH A 61 1161 33 HOH HOH . T 5 HOH A 62 1162 6 HOH HOH . T 5 HOH A 63 1163 162 HOH HOH . T 5 HOH A 64 1164 27 HOH HOH . T 5 HOH A 65 1165 149 HOH HOH . T 5 HOH A 66 1166 133 HOH HOH . T 5 HOH A 67 1167 35 HOH HOH . T 5 HOH A 68 1168 24 HOH HOH . T 5 HOH A 69 1169 134 HOH HOH . T 5 HOH A 70 1170 125 HOH HOH . T 5 HOH A 71 1171 34 HOH HOH . T 5 HOH A 72 1172 19 HOH HOH . T 5 HOH A 73 1173 156 HOH HOH . T 5 HOH A 74 1174 137 HOH HOH . T 5 HOH A 75 1175 112 HOH HOH . T 5 HOH A 76 1176 9 HOH HOH . T 5 HOH A 77 1177 8 HOH HOH . T 5 HOH A 78 1178 143 HOH HOH . T 5 HOH A 79 1179 154 HOH HOH . T 5 HOH A 80 1180 169 HOH HOH . T 5 HOH A 81 1181 123 HOH HOH . T 5 HOH A 82 1182 158 HOH HOH . T 5 HOH A 83 1183 124 HOH HOH . T 5 HOH A 84 1184 121 HOH HOH . T 5 HOH A 85 1185 138 HOH HOH . T 5 HOH A 86 1186 7 HOH HOH . T 5 HOH A 87 1187 17 HOH HOH . T 5 HOH A 88 1188 117 HOH HOH . T 5 HOH A 89 1189 10 HOH HOH . T 5 HOH A 90 1190 39 HOH HOH . T 5 HOH A 91 1191 166 HOH HOH . T 5 HOH A 92 1192 204 HOH HOH . T 5 HOH A 93 1193 43 HOH HOH . T 5 HOH A 94 1194 163 HOH HOH . T 5 HOH A 95 1195 145 HOH HOH . U 5 HOH C 1 1101 52 HOH HOH . U 5 HOH C 2 1102 60 HOH HOH . U 5 HOH C 3 1103 185 HOH HOH . U 5 HOH C 4 1104 106 HOH HOH . U 5 HOH C 5 1105 76 HOH HOH . U 5 HOH C 6 1106 56 HOH HOH . U 5 HOH C 7 1107 92 HOH HOH . U 5 HOH C 8 1108 109 HOH HOH . U 5 HOH C 9 1109 199 HOH HOH . U 5 HOH C 10 1110 79 HOH HOH . U 5 HOH C 11 1111 78 HOH HOH . U 5 HOH C 12 1112 172 HOH HOH . U 5 HOH C 13 1113 67 HOH HOH . U 5 HOH C 14 1114 176 HOH HOH . U 5 HOH C 15 1115 206 HOH HOH . U 5 HOH C 16 1116 188 HOH HOH . U 5 HOH C 17 1117 182 HOH HOH . U 5 HOH C 18 1118 111 HOH HOH . U 5 HOH C 19 1119 194 HOH HOH . U 5 HOH C 20 1120 131 HOH HOH . U 5 HOH C 21 1121 190 HOH HOH . U 5 HOH C 22 1122 88 HOH HOH . U 5 HOH C 23 1123 77 HOH HOH . U 5 HOH C 24 1124 179 HOH HOH . U 5 HOH C 25 1125 171 HOH HOH . U 5 HOH C 26 1126 62 HOH HOH . U 5 HOH C 27 1127 63 HOH HOH . U 5 HOH C 28 1128 50 HOH HOH . U 5 HOH C 29 1129 175 HOH HOH . U 5 HOH C 30 1130 73 HOH HOH . U 5 HOH C 31 1131 86 HOH HOH . U 5 HOH C 32 1132 173 HOH HOH . U 5 HOH C 33 1133 107 HOH HOH . U 5 HOH C 34 1134 81 HOH HOH . U 5 HOH C 35 1135 180 HOH HOH . U 5 HOH C 36 1136 54 HOH HOH . U 5 HOH C 37 1137 101 HOH HOH . U 5 HOH C 38 1138 53 HOH HOH . U 5 HOH C 39 1139 192 HOH HOH . U 5 HOH C 40 1140 87 HOH HOH . U 5 HOH C 41 1141 68 HOH HOH . U 5 HOH C 42 1142 196 HOH HOH . U 5 HOH C 43 1143 159 HOH HOH . U 5 HOH C 44 1144 55 HOH HOH . U 5 HOH C 45 1145 187 HOH HOH . U 5 HOH C 46 1146 82 HOH HOH . U 5 HOH C 47 1147 70 HOH HOH . U 5 HOH C 48 1148 91 HOH HOH . U 5 HOH C 49 1149 191 HOH HOH . U 5 HOH C 50 1150 129 HOH HOH . U 5 HOH C 51 1151 104 HOH HOH . U 5 HOH C 52 1152 103 HOH HOH . U 5 HOH C 53 1153 65 HOH HOH . U 5 HOH C 54 1154 64 HOH HOH . U 5 HOH C 55 1155 195 HOH HOH . U 5 HOH C 56 1156 178 HOH HOH . U 5 HOH C 57 1157 83 HOH HOH . U 5 HOH C 58 1158 59 HOH HOH . U 5 HOH C 59 1159 203 HOH HOH . U 5 HOH C 60 1160 202 HOH HOH . U 5 HOH C 61 1161 186 HOH HOH . U 5 HOH C 62 1162 184 HOH HOH . U 5 HOH C 63 1163 174 HOH HOH . U 5 HOH C 64 1164 46 HOH HOH . U 5 HOH C 65 1165 105 HOH HOH . U 5 HOH C 66 1166 132 HOH HOH . U 5 HOH C 67 1167 47 HOH HOH . U 5 HOH C 68 1168 189 HOH HOH . U 5 HOH C 69 1169 205 HOH HOH . U 5 HOH C 70 1170 61 HOH HOH . U 5 HOH C 71 1171 139 HOH HOH . U 5 HOH C 72 1172 201 HOH HOH . U 5 HOH C 73 1173 100 HOH HOH . U 5 HOH C 74 1174 110 HOH HOH . U 5 HOH C 75 1175 200 HOH HOH . U 5 HOH C 76 1176 58 HOH HOH . U 5 HOH C 77 1177 85 HOH HOH . U 5 HOH C 78 1178 84 HOH HOH . U 5 HOH C 79 1179 108 HOH HOH . U 5 HOH C 80 1180 198 HOH HOH . U 5 HOH C 81 1181 183 HOH HOH . U 5 HOH C 82 1182 93 HOH HOH . U 5 HOH C 83 1183 177 HOH HOH . U 5 HOH C 84 1184 74 HOH HOH . U 5 HOH C 85 1185 45 HOH HOH . U 5 HOH C 86 1186 102 HOH HOH . U 5 HOH C 87 1187 32 HOH HOH . U 5 HOH C 88 1188 57 HOH HOH . U 5 HOH C 89 1189 48 HOH HOH . U 5 HOH C 90 1190 193 HOH HOH . U 5 HOH C 91 1191 89 HOH HOH . U 5 HOH C 92 1192 181 HOH HOH . U 5 HOH C 93 1193 197 HOH HOH . U 5 HOH C 94 1194 157 HOH HOH . U 5 HOH C 95 1195 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 25.885 -2.593 24.292 1 50.58 ? C1 GOL 1005 A 1 HETATM 2 O O1 GOL . . . G 4 25.49 -1.212 24.404 1 54.65 ? O1 GOL 1005 A 1 HETATM 3 C C2 GOL . . . G 4 27.372 -2.503 24.463 1 47.62 ? C2 GOL 1005 A 1 HETATM 4 O O2 GOL . . . G 4 27.803 -1.41 23.67 1 49.07 ? O2 GOL 1005 A 1 HETATM 5 C C3 GOL . . . G 4 27.682 -2.152 25.893 1 43.76 ? C3 GOL 1005 A 1 HETATM 6 O O3 GOL . . . G 4 29.033 -2.497 26.182 1 40.36 ? O3 GOL 1005 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #