data_6ALB # _model_server_result.job_id ES4p8yVFhcpH_THZHYKslw _model_server_result.datetime_utc '2024-11-15 03:03:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6alb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1404}' # _entry.id 6ALB # _exptl.entry_id 6ALB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.334 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.69 _cell.angle_gamma 90 _cell.entry_id 6ALB _cell.length_a 92.004 _cell.length_b 60.635 _cell.length_c 53.835 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ALB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 120 A CYS 1199 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc2 A SG CYS 121 A CYS 1200 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc3 A SG CYS 134 A CYS 1213 1_555 D ZN ZN . A ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc4 A SG CYS 140 A CYS 1219 1_555 D ZN ZN . A ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc5 A SG CYS 158 A CYS 1237 1_555 D ZN ZN . A ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc6 A SG CYS 204 A CYS 1283 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc7 A SG CYS 207 A CYS 1286 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc8 A ND1 HIS 212 A HIS 1291 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc9 A SG CYS 215 A CYS 1294 1_555 B ZN ZN . A ZN 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc10 A SG CYS 229 A CYS 1308 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc11 A SG CYS 232 A CYS 1311 1_555 C ZN ZN . A ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'C11 H26 N2 O6' _chem_comp.formula_weight 282.334 _chem_comp.id B3P _chem_comp.mon_nstd_flag . _chem_comp.name 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 B3P sing 70 n n C1 C3 B3P sing 71 n n C1 H11 B3P sing 72 n n C1 H12 B3P sing 73 n n C2 N2 B3P sing 74 n n C2 H21 B3P sing 75 n n C2 H22 B3P sing 76 n n C3 N1 B3P sing 77 n n C3 H31 B3P sing 78 n n C3 H32 B3P sing 79 n n N1 C4 B3P sing 80 n n N1 HN1 B3P sing 81 n n C4 C5 B3P sing 82 n n C4 C6 B3P sing 83 n n C4 C7 B3P sing 84 n n C5 O4 B3P sing 85 n n C5 H51 B3P sing 86 n n C5 H52 B3P sing 87 n n C6 O5 B3P sing 88 n n C6 H61 B3P sing 89 n n C6 H62 B3P sing 90 n n C7 O6 B3P sing 91 n n C7 H71 B3P sing 92 n n C7 H72 B3P sing 93 n n N2 C8 B3P sing 94 n n N2 HN2 B3P sing 95 n n C8 C9 B3P sing 96 n n C8 C10 B3P sing 97 n n C8 C11 B3P sing 98 n n C9 O1 B3P sing 99 n n C9 H91 B3P sing 100 n n C9 H92 B3P sing 101 n n C10 O2 B3P sing 102 n n C10 H101 B3P sing 103 n n C10 H102 B3P sing 104 n n C11 O3 B3P sing 105 n n C11 H111 B3P sing 106 n n C11 H112 B3P sing 107 n n O1 HO1 B3P sing 108 n n O2 HO2 B3P sing 109 n n O3 HO3 B3P sing 110 n n O4 HO4 B3P sing 111 n n O5 HO5 B3P sing 112 n n O6 HO6 B3P sing 113 n n # _atom_sites.entry_id 6ALB _atom_sites.fract_transf_matrix[1][1] 0.010869 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002447 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1401 1401 ZN ZN . C 2 ZN A 1 1402 1402 ZN ZN . D 2 ZN A 1 1403 1403 ZN ZN . E 3 B3P A 1 1404 1 B3P B3P . F 4 BKJ A 1 1405 1 BKJ DRG . G 5 HOH A 1 1501 33 HOH HOH . G 5 HOH A 2 1502 16 HOH HOH . G 5 HOH A 3 1503 8 HOH HOH . G 5 HOH A 4 1504 3 HOH HOH . G 5 HOH A 5 1505 24 HOH HOH . G 5 HOH A 6 1506 31 HOH HOH . G 5 HOH A 7 1507 25 HOH HOH . G 5 HOH A 8 1508 4 HOH HOH . G 5 HOH A 9 1509 14 HOH HOH . G 5 HOH A 10 1510 20 HOH HOH . G 5 HOH A 11 1511 19 HOH HOH . G 5 HOH A 12 1512 22 HOH HOH . G 5 HOH A 13 1513 38 HOH HOH . G 5 HOH A 14 1514 10 HOH HOH . G 5 HOH A 15 1515 11 HOH HOH . G 5 HOH A 16 1516 13 HOH HOH . G 5 HOH A 17 1517 12 HOH HOH . G 5 HOH A 18 1518 9 HOH HOH . G 5 HOH A 19 1519 1 HOH HOH . G 5 HOH A 20 1520 7 HOH HOH . G 5 HOH A 21 1521 17 HOH HOH . G 5 HOH A 22 1522 30 HOH HOH . G 5 HOH A 23 1523 2 HOH HOH . G 5 HOH A 24 1524 6 HOH HOH . G 5 HOH A 25 1525 35 HOH HOH . G 5 HOH A 26 1526 23 HOH HOH . G 5 HOH A 27 1527 15 HOH HOH . G 5 HOH A 28 1528 37 HOH HOH . G 5 HOH A 29 1529 39 HOH HOH . G 5 HOH A 30 1530 5 HOH HOH . G 5 HOH A 31 1531 29 HOH HOH . G 5 HOH A 32 1532 18 HOH HOH . G 5 HOH A 33 1533 34 HOH HOH . G 5 HOH A 34 1534 32 HOH HOH . G 5 HOH A 35 1535 26 HOH HOH . G 5 HOH A 36 1536 28 HOH HOH . G 5 HOH A 37 1537 21 HOH HOH . G 5 HOH A 38 1538 36 HOH HOH . G 5 HOH A 39 1539 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B3P . . . E 3 20.579 4.189 3.532 0.92 69.17 ? C1 B3P 1404 A 1 HETATM 2 C C2 B3P . . . E 3 19.105 3.85 3.715 0.92 70.88 ? C2 B3P 1404 A 1 HETATM 3 C C3 B3P . . . E 3 20.837 4.75 2.145 0.92 70.52 ? C3 B3P 1404 A 1 HETATM 4 N N1 B3P . . . E 3 20.564 3.736 1.159 0.92 77.32 ? N1 B3P 1404 A 1 HETATM 5 C C4 B3P . . . E 3 19.788 4.022 -0.034 0.92 86.96 ? C4 B3P 1404 A 1 HETATM 6 C C5 B3P . . . E 3 20.142 2.934 -1.036 0.92 83.6 ? C5 B3P 1404 A 1 HETATM 7 C C6 B3P . . . E 3 18.284 3.976 0.232 0.92 87.24 ? C6 B3P 1404 A 1 HETATM 8 C C7 B3P . . . E 3 20.172 5.384 -0.606 0.92 86.85 ? C7 B3P 1404 A 1 HETATM 9 N N2 B3P . . . E 3 18.712 2.607 3.082 0.92 66.55 ? N2 B3P 1404 A 1 HETATM 10 C C8 B3P . . . E 3 18.217 1.538 3.93 0.92 70.96 ? C8 B3P 1404 A 1 HETATM 11 C C9 B3P . . . E 3 18.184 0.109 3.398 0.92 73.77 ? C9 B3P 1404 A 1 HETATM 12 C C10 B3P . . . E 3 17.631 1.85 5.287 0.92 59.12 ? C10 B3P 1404 A 1 HETATM 13 C C11 B3P . . . E 3 16.796 1.737 3.391 0.92 60.51 ? C11 B3P 1404 A 1 HETATM 14 O O1 B3P . . . E 3 19.399 -0.52 3.837 0.92 76.26 ? O1 B3P 1404 A 1 HETATM 15 O O2 B3P . . . E 3 18.287 0.896 6.117 0.92 60.31 ? O2 B3P 1404 A 1 HETATM 16 O O3 B3P . . . E 3 16.82 1.626 1.972 0.92 58.36 ? O3 B3P 1404 A 1 HETATM 17 O O4 B3P . . . E 3 19.704 1.683 -0.491 0.92 80.52 ? O4 B3P 1404 A 1 HETATM 18 O O5 B3P . . . E 3 17.848 5.14 0.947 0.92 92.69 ? O5 B3P 1404 A 1 HETATM 19 O O6 B3P . . . E 3 21.388 5.272 -1.351 0.92 88.39 ? O6 B3P 1404 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #