data_6ALO # _model_server_result.job_id fYn2kY-OFrdEJ02dsH1BYA _model_server_result.datetime_utc '2024-11-06 12:30:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6alo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6ALO # _exptl.entry_id 6ALO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.209 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGININE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.21 _cell.angle_gamma 90 _cell.entry_id 6ALO _cell.length_a 80.76 _cell.length_b 66.653 _cell.length_c 62.889 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ALO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 204 A HIS 168 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 A OE1 GLU 206 A GLU 170 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc3 A NE2 HIS 352 A HIS 316 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc4 B FE FE2 . A FE2 401 1_555 D O5 OKG . A OKG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc5 B FE FE2 . A FE2 401 1_555 D O2 OKG . A OKG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'C6 H15 N4 O2 1' _chem_comp.formula_weight 175.209 _chem_comp.id ARG _chem_comp.mon_nstd_flag y _chem_comp.name ARGININE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ARG sing 13 n n N H ARG sing 14 n n N H2 ARG sing 15 n n CA C ARG sing 16 n n CA CB ARG sing 17 n n CA HA ARG sing 18 n n C O ARG doub 19 n n C OXT ARG sing 20 n n CB CG ARG sing 21 n n CB HB2 ARG sing 22 n n CB HB3 ARG sing 23 n n CG CD ARG sing 24 n n CG HG2 ARG sing 25 n n CG HG3 ARG sing 26 n n CD NE ARG sing 27 n n CD HD2 ARG sing 28 n n CD HD3 ARG sing 29 n n NE CZ ARG sing 30 n n NE HE ARG sing 31 n n CZ NH1 ARG sing 32 n n CZ NH2 ARG doub 33 n n NH1 HH11 ARG sing 34 n n NH1 HH12 ARG sing 35 n n NH2 HH21 ARG sing 36 n n NH2 HH22 ARG sing 37 n n OXT HXT ARG sing 38 n n # _atom_sites.entry_id 6ALO _atom_sites.fract_transf_matrix[1][1] 0.012382 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004314 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 401 1 FE2 FE2 . C 3 ARG A 1 402 1 ARG ARG . D 4 OKG A 1 403 1 OKG OKG . E 5 HOH A 1 501 241 HOH HOH . E 5 HOH A 2 502 242 HOH HOH . E 5 HOH A 3 503 243 HOH HOH . E 5 HOH A 4 504 248 HOH HOH . E 5 HOH A 5 505 133 HOH HOH . E 5 HOH A 6 506 159 HOH HOH . E 5 HOH A 7 507 232 HOH HOH . E 5 HOH A 8 508 231 HOH HOH . E 5 HOH A 9 509 12 HOH HOH . E 5 HOH A 10 510 56 HOH HOH . E 5 HOH A 11 511 233 HOH HOH . E 5 HOH A 12 512 67 HOH HOH . E 5 HOH A 13 513 244 HOH HOH . E 5 HOH A 14 514 132 HOH HOH . E 5 HOH A 15 515 93 HOH HOH . E 5 HOH A 16 516 110 HOH HOH . E 5 HOH A 17 517 95 HOH HOH . E 5 HOH A 18 518 91 HOH HOH . E 5 HOH A 19 519 24 HOH HOH . E 5 HOH A 20 520 5 HOH HOH . E 5 HOH A 21 521 245 HOH HOH . E 5 HOH A 22 522 99 HOH HOH . E 5 HOH A 23 523 73 HOH HOH . E 5 HOH A 24 524 49 HOH HOH . E 5 HOH A 25 525 4 HOH HOH . E 5 HOH A 26 526 28 HOH HOH . E 5 HOH A 27 527 117 HOH HOH . E 5 HOH A 28 528 158 HOH HOH . E 5 HOH A 29 529 63 HOH HOH . E 5 HOH A 30 530 69 HOH HOH . E 5 HOH A 31 531 43 HOH HOH . E 5 HOH A 32 532 138 HOH HOH . E 5 HOH A 33 533 90 HOH HOH . E 5 HOH A 34 534 75 HOH HOH . E 5 HOH A 35 535 33 HOH HOH . E 5 HOH A 36 536 120 HOH HOH . E 5 HOH A 37 537 9 HOH HOH . E 5 HOH A 38 538 185 HOH HOH . E 5 HOH A 39 539 57 HOH HOH . E 5 HOH A 40 540 175 HOH HOH . E 5 HOH A 41 541 26 HOH HOH . E 5 HOH A 42 542 166 HOH HOH . E 5 HOH A 43 543 145 HOH HOH . E 5 HOH A 44 544 76 HOH HOH . E 5 HOH A 45 545 107 HOH HOH . E 5 HOH A 46 546 31 HOH HOH . E 5 HOH A 47 547 123 HOH HOH . E 5 HOH A 48 548 106 HOH HOH . E 5 HOH A 49 549 103 HOH HOH . E 5 HOH A 50 550 13 HOH HOH . E 5 HOH A 51 551 20 HOH HOH . E 5 HOH A 52 552 3 HOH HOH . E 5 HOH A 53 553 105 HOH HOH . E 5 HOH A 54 554 21 HOH HOH . E 5 HOH A 55 555 22 HOH HOH . E 5 HOH A 56 556 65 HOH HOH . E 5 HOH A 57 557 178 HOH HOH . E 5 HOH A 58 558 239 HOH HOH . E 5 HOH A 59 559 146 HOH HOH . E 5 HOH A 60 560 25 HOH HOH . E 5 HOH A 61 561 253 HOH HOH . E 5 HOH A 62 562 79 HOH HOH . E 5 HOH A 63 563 126 HOH HOH . E 5 HOH A 64 564 200 HOH HOH . E 5 HOH A 65 565 210 HOH HOH . E 5 HOH A 66 566 97 HOH HOH . E 5 HOH A 67 567 84 HOH HOH . E 5 HOH A 68 568 194 HOH HOH . E 5 HOH A 69 569 142 HOH HOH . E 5 HOH A 70 570 100 HOH HOH . E 5 HOH A 71 571 170 HOH HOH . E 5 HOH A 72 572 1 HOH HOH . E 5 HOH A 73 573 186 HOH HOH . E 5 HOH A 74 574 116 HOH HOH . E 5 HOH A 75 575 60 HOH HOH . E 5 HOH A 76 576 201 HOH HOH . E 5 HOH A 77 577 55 HOH HOH . E 5 HOH A 78 578 30 HOH HOH . E 5 HOH A 79 579 42 HOH HOH . E 5 HOH A 80 580 204 HOH HOH . E 5 HOH A 81 581 14 HOH HOH . E 5 HOH A 82 582 88 HOH HOH . E 5 HOH A 83 583 177 HOH HOH . E 5 HOH A 84 584 136 HOH HOH . E 5 HOH A 85 585 101 HOH HOH . E 5 HOH A 86 586 2 HOH HOH . E 5 HOH A 87 587 80 HOH HOH . E 5 HOH A 88 588 66 HOH HOH . E 5 HOH A 89 589 247 HOH HOH . E 5 HOH A 90 590 29 HOH HOH . E 5 HOH A 91 591 68 HOH HOH . E 5 HOH A 92 592 216 HOH HOH . E 5 HOH A 93 593 98 HOH HOH . E 5 HOH A 94 594 124 HOH HOH . E 5 HOH A 95 595 121 HOH HOH . E 5 HOH A 96 596 82 HOH HOH . E 5 HOH A 97 597 71 HOH HOH . E 5 HOH A 98 598 190 HOH HOH . E 5 HOH A 99 599 109 HOH HOH . E 5 HOH A 100 600 59 HOH HOH . E 5 HOH A 101 601 122 HOH HOH . E 5 HOH A 102 602 118 HOH HOH . E 5 HOH A 103 603 169 HOH HOH . E 5 HOH A 104 604 51 HOH HOH . E 5 HOH A 105 605 144 HOH HOH . E 5 HOH A 106 606 53 HOH HOH . E 5 HOH A 107 607 8 HOH HOH . E 5 HOH A 108 608 236 HOH HOH . E 5 HOH A 109 609 61 HOH HOH . E 5 HOH A 110 610 16 HOH HOH . E 5 HOH A 111 611 48 HOH HOH . E 5 HOH A 112 612 72 HOH HOH . E 5 HOH A 113 613 18 HOH HOH . E 5 HOH A 114 614 191 HOH HOH . E 5 HOH A 115 615 187 HOH HOH . E 5 HOH A 116 616 234 HOH HOH . E 5 HOH A 117 617 38 HOH HOH . E 5 HOH A 118 618 140 HOH HOH . E 5 HOH A 119 619 17 HOH HOH . E 5 HOH A 120 620 40 HOH HOH . E 5 HOH A 121 621 64 HOH HOH . E 5 HOH A 122 622 125 HOH HOH . E 5 HOH A 123 623 85 HOH HOH . E 5 HOH A 124 624 249 HOH HOH . E 5 HOH A 125 625 240 HOH HOH . E 5 HOH A 126 626 81 HOH HOH . E 5 HOH A 127 627 157 HOH HOH . E 5 HOH A 128 628 102 HOH HOH . E 5 HOH A 129 629 44 HOH HOH . E 5 HOH A 130 630 112 HOH HOH . E 5 HOH A 131 631 135 HOH HOH . E 5 HOH A 132 632 36 HOH HOH . E 5 HOH A 133 633 168 HOH HOH . E 5 HOH A 134 634 238 HOH HOH . E 5 HOH A 135 635 163 HOH HOH . E 5 HOH A 136 636 173 HOH HOH . E 5 HOH A 137 637 188 HOH HOH . E 5 HOH A 138 638 70 HOH HOH . E 5 HOH A 139 639 41 HOH HOH . E 5 HOH A 140 640 58 HOH HOH . E 5 HOH A 141 641 62 HOH HOH . E 5 HOH A 142 642 19 HOH HOH . E 5 HOH A 143 643 184 HOH HOH . E 5 HOH A 144 644 203 HOH HOH . E 5 HOH A 145 645 165 HOH HOH . E 5 HOH A 146 646 152 HOH HOH . E 5 HOH A 147 647 192 HOH HOH . E 5 HOH A 148 648 54 HOH HOH . E 5 HOH A 149 649 209 HOH HOH . E 5 HOH A 150 650 83 HOH HOH . E 5 HOH A 151 651 151 HOH HOH . E 5 HOH A 152 652 141 HOH HOH . E 5 HOH A 153 653 52 HOH HOH . E 5 HOH A 154 654 86 HOH HOH . E 5 HOH A 155 655 47 HOH HOH . E 5 HOH A 156 656 37 HOH HOH . E 5 HOH A 157 657 137 HOH HOH . E 5 HOH A 158 658 111 HOH HOH . E 5 HOH A 159 659 113 HOH HOH . E 5 HOH A 160 660 198 HOH HOH . E 5 HOH A 161 661 130 HOH HOH . E 5 HOH A 162 662 127 HOH HOH . E 5 HOH A 163 663 183 HOH HOH . E 5 HOH A 164 664 218 HOH HOH . E 5 HOH A 165 665 171 HOH HOH . E 5 HOH A 166 666 39 HOH HOH . E 5 HOH A 167 667 114 HOH HOH . E 5 HOH A 168 668 143 HOH HOH . E 5 HOH A 169 669 50 HOH HOH . E 5 HOH A 170 670 115 HOH HOH . E 5 HOH A 171 671 46 HOH HOH . E 5 HOH A 172 672 32 HOH HOH . E 5 HOH A 173 673 208 HOH HOH . E 5 HOH A 174 674 129 HOH HOH . E 5 HOH A 175 675 104 HOH HOH . E 5 HOH A 176 676 35 HOH HOH . E 5 HOH A 177 677 89 HOH HOH . E 5 HOH A 178 678 23 HOH HOH . E 5 HOH A 179 679 27 HOH HOH . E 5 HOH A 180 680 179 HOH HOH . E 5 HOH A 181 681 205 HOH HOH . E 5 HOH A 182 682 250 HOH HOH . E 5 HOH A 183 683 213 HOH HOH . E 5 HOH A 184 684 87 HOH HOH . E 5 HOH A 185 685 211 HOH HOH . E 5 HOH A 186 686 96 HOH HOH . E 5 HOH A 187 687 252 HOH HOH . E 5 HOH A 188 688 195 HOH HOH . E 5 HOH A 189 689 202 HOH HOH . E 5 HOH A 190 690 219 HOH HOH . E 5 HOH A 191 691 10 HOH HOH . E 5 HOH A 192 692 206 HOH HOH . E 5 HOH A 193 693 180 HOH HOH . E 5 HOH A 194 694 221 HOH HOH . E 5 HOH A 195 695 207 HOH HOH . E 5 HOH A 196 696 15 HOH HOH . E 5 HOH A 197 697 74 HOH HOH . E 5 HOH A 198 698 237 HOH HOH . E 5 HOH A 199 699 119 HOH HOH . E 5 HOH A 200 700 215 HOH HOH . E 5 HOH A 201 701 134 HOH HOH . E 5 HOH A 202 702 94 HOH HOH . E 5 HOH A 203 703 34 HOH HOH . E 5 HOH A 204 704 147 HOH HOH . E 5 HOH A 205 705 176 HOH HOH . E 5 HOH A 206 706 212 HOH HOH . E 5 HOH A 207 707 246 HOH HOH . E 5 HOH A 208 708 139 HOH HOH . E 5 HOH A 209 709 128 HOH HOH . E 5 HOH A 210 710 154 HOH HOH . E 5 HOH A 211 711 108 HOH HOH . E 5 HOH A 212 712 223 HOH HOH . E 5 HOH A 213 713 193 HOH HOH . E 5 HOH A 214 714 235 HOH HOH . E 5 HOH A 215 715 227 HOH HOH . E 5 HOH A 216 716 78 HOH HOH . E 5 HOH A 217 717 226 HOH HOH . E 5 HOH A 218 718 228 HOH HOH . E 5 HOH A 219 719 230 HOH HOH . E 5 HOH A 220 720 153 HOH HOH . E 5 HOH A 221 721 77 HOH HOH . E 5 HOH A 222 722 251 HOH HOH . E 5 HOH A 223 723 222 HOH HOH . E 5 HOH A 224 724 224 HOH HOH . E 5 HOH A 225 725 148 HOH HOH . E 5 HOH A 226 726 92 HOH HOH . E 5 HOH A 227 727 220 HOH HOH . E 5 HOH A 228 728 172 HOH HOH . E 5 HOH A 229 729 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ARG . . . C 3 10.308 6.4 18.255 1 21.41 ? N ARG 402 A 1 HETATM 2 C CA ARG . . . C 3 11.251 6.943 19.275 1 21.16 ? CA ARG 402 A 1 HETATM 3 C C ARG . . . C 3 12.421 5.99 19.509 1 20.88 ? C ARG 402 A 1 HETATM 4 O O ARG . . . C 3 12.565 4.964 18.843 1 21.34 ? O ARG 402 A 1 HETATM 5 C CB ARG . . . C 3 10.528 7.19 20.601 1 21.15 ? CB ARG 402 A 1 HETATM 6 C CG ARG . . . C 3 9.434 8.245 20.552 1 20.87 ? CG ARG 402 A 1 HETATM 7 C CD ARG . . . C 3 9.961 9.673 20.424 1 21.02 ? CD ARG 402 A 1 HETATM 8 N NE ARG . . . C 3 8.929 10.636 20.833 1 20.58 ? NE ARG 402 A 1 HETATM 9 C CZ ARG . . . C 3 8.627 10.948 22.098 1 20.58 ? CZ ARG 402 A 1 HETATM 10 N NH1 ARG . . . C 3 9.283 10.4 23.12 1 20.71 ? NH1 ARG 402 A 1 HETATM 11 N NH2 ARG . . . C 3 7.651 11.815 22.355 1 20.51 ? NH2 ARG 402 A 1 HETATM 12 O OXT ARG . . . C 3 13.243 6.219 20.39 1 20.53 ? OXT ARG 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 12 #