data_6ALQ
#
_model_server_result.job_id            hDMYZjtHeHLKnBgHn5x8BA 
_model_server_result.datetime_utc      '2024-11-25 08:33:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6alq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    6ALQ 
#
_exptl.entry_id    6ALQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.088 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SUCCINIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.27 
_cell.angle_gamma         90 
_cell.entry_id            6ALQ 
_cell.length_a            80.844 
_cell.length_b            66.751 
_cell.length_c            62.922 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ALQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 204 A HIS 168 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc2 A OE1 GLU 206 A GLU 170 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc3 A NE2 HIS 352 A HIS 316 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc4 B FE FE2 . A FE2 401 1_555 C O3 SIN . A SIN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc5 B FE FE2 . A FE2 401 1_555 C O4 SIN . A SIN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
#
_chem_comp.formula           'C4 H6 O4' 
_chem_comp.formula_weight    118.088 
_chem_comp.id                SIN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SUCCINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 SIN doub 290 n n 
C1 O2 SIN sing 291 n n 
C1 C2 SIN sing 292 n n 
O2 HO2 SIN sing 293 n n 
C2 C3 SIN sing 294 n n 
C2 H21 SIN sing 295 n n 
C2 H22 SIN sing 296 n n 
C3 C4 SIN sing 297 n n 
C3 H31 SIN sing 298 n n 
C3 H32 SIN sing 299 n n 
C4 O3 SIN doub 300 n n 
C4 O4 SIN sing 301 n n 
O4 HO4 SIN sing 302 n n 
#
_atom_sites.entry_id                     6ALQ 
_atom_sites.fract_transf_matrix[1][1]    0.01237 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004325 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014981 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016836 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE2 A 1 401 1 FE2 FE2 . 
C 3 SIN A 1 402 1 SIN SIN . 
D 4 ARG A 1 403 1 ARG ARG . 
E 5 HOH A 1 501 135 HOH HOH . 
E 5 HOH A 2 502 61 HOH HOH . 
E 5 HOH A 3 503 110 HOH HOH . 
E 5 HOH A 4 504 149 HOH HOH . 
E 5 HOH A 5 505 159 HOH HOH . 
E 5 HOH A 6 506 32 HOH HOH . 
E 5 HOH A 7 507 94 HOH HOH . 
E 5 HOH A 8 508 29 HOH HOH . 
E 5 HOH A 9 509 170 HOH HOH . 
E 5 HOH A 10 510 10 HOH HOH . 
E 5 HOH A 11 511 178 HOH HOH . 
E 5 HOH A 12 512 164 HOH HOH . 
E 5 HOH A 13 513 161 HOH HOH . 
E 5 HOH A 14 514 138 HOH HOH . 
E 5 HOH A 15 515 55 HOH HOH . 
E 5 HOH A 16 516 19 HOH HOH . 
E 5 HOH A 17 517 11 HOH HOH . 
E 5 HOH A 18 518 53 HOH HOH . 
E 5 HOH A 19 519 44 HOH HOH . 
E 5 HOH A 20 520 107 HOH HOH . 
E 5 HOH A 21 521 100 HOH HOH . 
E 5 HOH A 22 522 34 HOH HOH . 
E 5 HOH A 23 523 48 HOH HOH . 
E 5 HOH A 24 524 18 HOH HOH . 
E 5 HOH A 25 525 26 HOH HOH . 
E 5 HOH A 26 526 119 HOH HOH . 
E 5 HOH A 27 527 21 HOH HOH . 
E 5 HOH A 28 528 113 HOH HOH . 
E 5 HOH A 29 529 121 HOH HOH . 
E 5 HOH A 30 530 28 HOH HOH . 
E 5 HOH A 31 531 14 HOH HOH . 
E 5 HOH A 32 532 171 HOH HOH . 
E 5 HOH A 33 533 56 HOH HOH . 
E 5 HOH A 34 534 173 HOH HOH . 
E 5 HOH A 35 535 179 HOH HOH . 
E 5 HOH A 36 536 2 HOH HOH . 
E 5 HOH A 37 537 60 HOH HOH . 
E 5 HOH A 38 538 84 HOH HOH . 
E 5 HOH A 39 539 67 HOH HOH . 
E 5 HOH A 40 540 45 HOH HOH . 
E 5 HOH A 41 541 112 HOH HOH . 
E 5 HOH A 42 542 5 HOH HOH . 
E 5 HOH A 43 543 127 HOH HOH . 
E 5 HOH A 44 544 71 HOH HOH . 
E 5 HOH A 45 545 74 HOH HOH . 
E 5 HOH A 46 546 140 HOH HOH . 
E 5 HOH A 47 547 46 HOH HOH . 
E 5 HOH A 48 548 156 HOH HOH . 
E 5 HOH A 49 549 69 HOH HOH . 
E 5 HOH A 50 550 83 HOH HOH . 
E 5 HOH A 51 551 108 HOH HOH . 
E 5 HOH A 52 552 111 HOH HOH . 
E 5 HOH A 53 553 23 HOH HOH . 
E 5 HOH A 54 554 27 HOH HOH . 
E 5 HOH A 55 555 38 HOH HOH . 
E 5 HOH A 56 556 167 HOH HOH . 
E 5 HOH A 57 557 25 HOH HOH . 
E 5 HOH A 58 558 36 HOH HOH . 
E 5 HOH A 59 559 136 HOH HOH . 
E 5 HOH A 60 560 15 HOH HOH . 
E 5 HOH A 61 561 8 HOH HOH . 
E 5 HOH A 62 562 59 HOH HOH . 
E 5 HOH A 63 563 1 HOH HOH . 
E 5 HOH A 64 564 39 HOH HOH . 
E 5 HOH A 65 565 133 HOH HOH . 
E 5 HOH A 66 566 51 HOH HOH . 
E 5 HOH A 67 567 139 HOH HOH . 
E 5 HOH A 68 568 98 HOH HOH . 
E 5 HOH A 69 569 150 HOH HOH . 
E 5 HOH A 70 570 52 HOH HOH . 
E 5 HOH A 71 571 109 HOH HOH . 
E 5 HOH A 72 572 24 HOH HOH . 
E 5 HOH A 73 573 80 HOH HOH . 
E 5 HOH A 74 574 168 HOH HOH . 
E 5 HOH A 75 575 37 HOH HOH . 
E 5 HOH A 76 576 70 HOH HOH . 
E 5 HOH A 77 577 102 HOH HOH . 
E 5 HOH A 78 578 118 HOH HOH . 
E 5 HOH A 79 579 166 HOH HOH . 
E 5 HOH A 80 580 68 HOH HOH . 
E 5 HOH A 81 581 20 HOH HOH . 
E 5 HOH A 82 582 76 HOH HOH . 
E 5 HOH A 83 583 91 HOH HOH . 
E 5 HOH A 84 584 128 HOH HOH . 
E 5 HOH A 85 585 152 HOH HOH . 
E 5 HOH A 86 586 17 HOH HOH . 
E 5 HOH A 87 587 13 HOH HOH . 
E 5 HOH A 88 588 177 HOH HOH . 
E 5 HOH A 89 589 41 HOH HOH . 
E 5 HOH A 90 590 58 HOH HOH . 
E 5 HOH A 91 591 174 HOH HOH . 
E 5 HOH A 92 592 77 HOH HOH . 
E 5 HOH A 93 593 151 HOH HOH . 
E 5 HOH A 94 594 3 HOH HOH . 
E 5 HOH A 95 595 116 HOH HOH . 
E 5 HOH A 96 596 162 HOH HOH . 
E 5 HOH A 97 597 103 HOH HOH . 
E 5 HOH A 98 598 141 HOH HOH . 
E 5 HOH A 99 599 175 HOH HOH . 
E 5 HOH A 100 600 9 HOH HOH . 
E 5 HOH A 101 601 12 HOH HOH . 
E 5 HOH A 102 602 180 HOH HOH . 
E 5 HOH A 103 603 40 HOH HOH . 
E 5 HOH A 104 604 92 HOH HOH . 
E 5 HOH A 105 605 7 HOH HOH . 
E 5 HOH A 106 606 73 HOH HOH . 
E 5 HOH A 107 607 176 HOH HOH . 
E 5 HOH A 108 608 87 HOH HOH . 
E 5 HOH A 109 609 22 HOH HOH . 
E 5 HOH A 110 610 114 HOH HOH . 
E 5 HOH A 111 611 124 HOH HOH . 
E 5 HOH A 112 612 184 HOH HOH . 
E 5 HOH A 113 613 63 HOH HOH . 
E 5 HOH A 114 614 88 HOH HOH . 
E 5 HOH A 115 615 147 HOH HOH . 
E 5 HOH A 116 616 125 HOH HOH . 
E 5 HOH A 117 617 106 HOH HOH . 
E 5 HOH A 118 618 93 HOH HOH . 
E 5 HOH A 119 619 142 HOH HOH . 
E 5 HOH A 120 620 6 HOH HOH . 
E 5 HOH A 121 621 96 HOH HOH . 
E 5 HOH A 122 622 137 HOH HOH . 
E 5 HOH A 123 623 62 HOH HOH . 
E 5 HOH A 124 624 131 HOH HOH . 
E 5 HOH A 125 625 33 HOH HOH . 
E 5 HOH A 126 626 89 HOH HOH . 
E 5 HOH A 127 627 122 HOH HOH . 
E 5 HOH A 128 628 64 HOH HOH . 
E 5 HOH A 129 629 181 HOH HOH . 
E 5 HOH A 130 630 172 HOH HOH . 
E 5 HOH A 131 631 90 HOH HOH . 
E 5 HOH A 132 632 31 HOH HOH . 
E 5 HOH A 133 633 4 HOH HOH . 
E 5 HOH A 134 634 66 HOH HOH . 
E 5 HOH A 135 635 101 HOH HOH . 
E 5 HOH A 136 636 85 HOH HOH . 
E 5 HOH A 137 637 42 HOH HOH . 
E 5 HOH A 138 638 115 HOH HOH . 
E 5 HOH A 139 639 30 HOH HOH . 
E 5 HOH A 140 640 145 HOH HOH . 
E 5 HOH A 141 641 120 HOH HOH . 
E 5 HOH A 142 642 43 HOH HOH . 
E 5 HOH A 143 643 57 HOH HOH . 
E 5 HOH A 144 644 49 HOH HOH . 
E 5 HOH A 145 645 78 HOH HOH . 
E 5 HOH A 146 646 81 HOH HOH . 
E 5 HOH A 147 647 16 HOH HOH . 
E 5 HOH A 148 648 79 HOH HOH . 
E 5 HOH A 149 649 54 HOH HOH . 
E 5 HOH A 150 650 117 HOH HOH . 
E 5 HOH A 151 651 160 HOH HOH . 
E 5 HOH A 152 652 123 HOH HOH . 
E 5 HOH A 153 653 35 HOH HOH . 
E 5 HOH A 154 654 154 HOH HOH . 
E 5 HOH A 155 655 132 HOH HOH . 
E 5 HOH A 156 656 126 HOH HOH . 
E 5 HOH A 157 657 155 HOH HOH . 
E 5 HOH A 158 658 82 HOH HOH . 
E 5 HOH A 159 659 165 HOH HOH . 
E 5 HOH A 160 660 50 HOH HOH . 
E 5 HOH A 161 661 144 HOH HOH . 
E 5 HOH A 162 662 65 HOH HOH . 
E 5 HOH A 163 663 185 HOH HOH . 
E 5 HOH A 164 664 95 HOH HOH . 
E 5 HOH A 165 665 148 HOH HOH . 
E 5 HOH A 166 666 105 HOH HOH . 
E 5 HOH A 167 667 134 HOH HOH . 
E 5 HOH A 168 668 169 HOH HOH . 
E 5 HOH A 169 669 104 HOH HOH . 
E 5 HOH A 170 670 75 HOH HOH . 
E 5 HOH A 171 671 72 HOH HOH . 
E 5 HOH A 172 672 143 HOH HOH . 
E 5 HOH A 173 673 153 HOH HOH . 
E 5 HOH A 174 674 157 HOH HOH . 
E 5 HOH A 175 675 163 HOH HOH . 
E 5 HOH A 176 676 182 HOH HOH . 
E 5 HOH A 177 677 130 HOH HOH . 
E 5 HOH A 178 678 129 HOH HOH . 
E 5 HOH A 179 679 183 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SIN . . . C 3 6.687 0.39 23.706 1 18.56 ? C1 SIN 402 A 1 
HETATM 2 O O1 SIN . . . C 3 5.715 -0.355 24.004 1 18.07 ? O1 SIN 402 A 1 
HETATM 3 O O2 SIN . . . C 3 7.801 0.298 24.263 1 17.36 ? O2 SIN 402 A 1 
HETATM 4 C C2 SIN . . . C 3 6.486 1.441 22.632 1 18.89 ? C2 SIN 402 A 1 
HETATM 5 C C3 SIN . . . C 3 7.765 1.68 21.833 1 19.59 ? C3 SIN 402 A 1 
HETATM 6 C C4 SIN . . . C 3 7.541 2.726 20.761 1 20.13 ? C4 SIN 402 A 1 
HETATM 7 O O3 SIN . . . C 3 7.867 2.477 19.58 1 21.88 ? O3 SIN 402 A 1 
HETATM 8 O O4 SIN . . . C 3 7.039 3.821 21.075 1 20.09 ? O4 SIN 402 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#