data_6ALQ # _model_server_result.job_id J-YPdOfv-3aiwc20r_mUcQ _model_server_result.datetime_utc '2024-11-25 08:20:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6alq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6ALQ # _exptl.entry_id 6ALQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.209 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGININE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.27 _cell.angle_gamma 90 _cell.entry_id 6ALQ _cell.length_a 80.844 _cell.length_b 66.751 _cell.length_c 62.922 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ALQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 204 A HIS 168 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A OE1 GLU 206 A GLU 170 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc3 A NE2 HIS 352 A HIS 316 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc4 B FE FE2 . A FE2 401 1_555 C O3 SIN . A SIN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc5 B FE FE2 . A FE2 401 1_555 C O4 SIN . A SIN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'C6 H15 N4 O2 1' _chem_comp.formula_weight 175.209 _chem_comp.id ARG _chem_comp.mon_nstd_flag y _chem_comp.name ARGININE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ARG sing 13 n n N H ARG sing 14 n n N H2 ARG sing 15 n n CA C ARG sing 16 n n CA CB ARG sing 17 n n CA HA ARG sing 18 n n C O ARG doub 19 n n C OXT ARG sing 20 n n CB CG ARG sing 21 n n CB HB2 ARG sing 22 n n CB HB3 ARG sing 23 n n CG CD ARG sing 24 n n CG HG2 ARG sing 25 n n CG HG3 ARG sing 26 n n CD NE ARG sing 27 n n CD HD2 ARG sing 28 n n CD HD3 ARG sing 29 n n NE CZ ARG sing 30 n n NE HE ARG sing 31 n n CZ NH1 ARG sing 32 n n CZ NH2 ARG doub 33 n n NH1 HH11 ARG sing 34 n n NH1 HH12 ARG sing 35 n n NH2 HH21 ARG sing 36 n n NH2 HH22 ARG sing 37 n n OXT HXT ARG sing 38 n n # _atom_sites.entry_id 6ALQ _atom_sites.fract_transf_matrix[1][1] 0.01237 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004325 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016836 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 401 1 FE2 FE2 . C 3 SIN A 1 402 1 SIN SIN . D 4 ARG A 1 403 1 ARG ARG . E 5 HOH A 1 501 135 HOH HOH . E 5 HOH A 2 502 61 HOH HOH . E 5 HOH A 3 503 110 HOH HOH . E 5 HOH A 4 504 149 HOH HOH . E 5 HOH A 5 505 159 HOH HOH . E 5 HOH A 6 506 32 HOH HOH . E 5 HOH A 7 507 94 HOH HOH . E 5 HOH A 8 508 29 HOH HOH . E 5 HOH A 9 509 170 HOH HOH . E 5 HOH A 10 510 10 HOH HOH . E 5 HOH A 11 511 178 HOH HOH . E 5 HOH A 12 512 164 HOH HOH . E 5 HOH A 13 513 161 HOH HOH . E 5 HOH A 14 514 138 HOH HOH . E 5 HOH A 15 515 55 HOH HOH . E 5 HOH A 16 516 19 HOH HOH . E 5 HOH A 17 517 11 HOH HOH . E 5 HOH A 18 518 53 HOH HOH . E 5 HOH A 19 519 44 HOH HOH . E 5 HOH A 20 520 107 HOH HOH . E 5 HOH A 21 521 100 HOH HOH . E 5 HOH A 22 522 34 HOH HOH . E 5 HOH A 23 523 48 HOH HOH . E 5 HOH A 24 524 18 HOH HOH . E 5 HOH A 25 525 26 HOH HOH . E 5 HOH A 26 526 119 HOH HOH . E 5 HOH A 27 527 21 HOH HOH . E 5 HOH A 28 528 113 HOH HOH . E 5 HOH A 29 529 121 HOH HOH . E 5 HOH A 30 530 28 HOH HOH . E 5 HOH A 31 531 14 HOH HOH . E 5 HOH A 32 532 171 HOH HOH . E 5 HOH A 33 533 56 HOH HOH . E 5 HOH A 34 534 173 HOH HOH . E 5 HOH A 35 535 179 HOH HOH . E 5 HOH A 36 536 2 HOH HOH . E 5 HOH A 37 537 60 HOH HOH . E 5 HOH A 38 538 84 HOH HOH . E 5 HOH A 39 539 67 HOH HOH . E 5 HOH A 40 540 45 HOH HOH . E 5 HOH A 41 541 112 HOH HOH . E 5 HOH A 42 542 5 HOH HOH . E 5 HOH A 43 543 127 HOH HOH . E 5 HOH A 44 544 71 HOH HOH . E 5 HOH A 45 545 74 HOH HOH . E 5 HOH A 46 546 140 HOH HOH . E 5 HOH A 47 547 46 HOH HOH . E 5 HOH A 48 548 156 HOH HOH . E 5 HOH A 49 549 69 HOH HOH . E 5 HOH A 50 550 83 HOH HOH . E 5 HOH A 51 551 108 HOH HOH . E 5 HOH A 52 552 111 HOH HOH . E 5 HOH A 53 553 23 HOH HOH . E 5 HOH A 54 554 27 HOH HOH . E 5 HOH A 55 555 38 HOH HOH . E 5 HOH A 56 556 167 HOH HOH . E 5 HOH A 57 557 25 HOH HOH . E 5 HOH A 58 558 36 HOH HOH . E 5 HOH A 59 559 136 HOH HOH . E 5 HOH A 60 560 15 HOH HOH . E 5 HOH A 61 561 8 HOH HOH . E 5 HOH A 62 562 59 HOH HOH . E 5 HOH A 63 563 1 HOH HOH . E 5 HOH A 64 564 39 HOH HOH . E 5 HOH A 65 565 133 HOH HOH . E 5 HOH A 66 566 51 HOH HOH . E 5 HOH A 67 567 139 HOH HOH . E 5 HOH A 68 568 98 HOH HOH . E 5 HOH A 69 569 150 HOH HOH . E 5 HOH A 70 570 52 HOH HOH . E 5 HOH A 71 571 109 HOH HOH . E 5 HOH A 72 572 24 HOH HOH . E 5 HOH A 73 573 80 HOH HOH . E 5 HOH A 74 574 168 HOH HOH . E 5 HOH A 75 575 37 HOH HOH . E 5 HOH A 76 576 70 HOH HOH . E 5 HOH A 77 577 102 HOH HOH . E 5 HOH A 78 578 118 HOH HOH . E 5 HOH A 79 579 166 HOH HOH . E 5 HOH A 80 580 68 HOH HOH . E 5 HOH A 81 581 20 HOH HOH . E 5 HOH A 82 582 76 HOH HOH . E 5 HOH A 83 583 91 HOH HOH . E 5 HOH A 84 584 128 HOH HOH . E 5 HOH A 85 585 152 HOH HOH . E 5 HOH A 86 586 17 HOH HOH . E 5 HOH A 87 587 13 HOH HOH . E 5 HOH A 88 588 177 HOH HOH . E 5 HOH A 89 589 41 HOH HOH . E 5 HOH A 90 590 58 HOH HOH . E 5 HOH A 91 591 174 HOH HOH . E 5 HOH A 92 592 77 HOH HOH . E 5 HOH A 93 593 151 HOH HOH . E 5 HOH A 94 594 3 HOH HOH . E 5 HOH A 95 595 116 HOH HOH . E 5 HOH A 96 596 162 HOH HOH . E 5 HOH A 97 597 103 HOH HOH . E 5 HOH A 98 598 141 HOH HOH . E 5 HOH A 99 599 175 HOH HOH . E 5 HOH A 100 600 9 HOH HOH . E 5 HOH A 101 601 12 HOH HOH . E 5 HOH A 102 602 180 HOH HOH . E 5 HOH A 103 603 40 HOH HOH . E 5 HOH A 104 604 92 HOH HOH . E 5 HOH A 105 605 7 HOH HOH . E 5 HOH A 106 606 73 HOH HOH . E 5 HOH A 107 607 176 HOH HOH . E 5 HOH A 108 608 87 HOH HOH . E 5 HOH A 109 609 22 HOH HOH . E 5 HOH A 110 610 114 HOH HOH . E 5 HOH A 111 611 124 HOH HOH . E 5 HOH A 112 612 184 HOH HOH . E 5 HOH A 113 613 63 HOH HOH . E 5 HOH A 114 614 88 HOH HOH . E 5 HOH A 115 615 147 HOH HOH . E 5 HOH A 116 616 125 HOH HOH . E 5 HOH A 117 617 106 HOH HOH . E 5 HOH A 118 618 93 HOH HOH . E 5 HOH A 119 619 142 HOH HOH . E 5 HOH A 120 620 6 HOH HOH . E 5 HOH A 121 621 96 HOH HOH . E 5 HOH A 122 622 137 HOH HOH . E 5 HOH A 123 623 62 HOH HOH . E 5 HOH A 124 624 131 HOH HOH . E 5 HOH A 125 625 33 HOH HOH . E 5 HOH A 126 626 89 HOH HOH . E 5 HOH A 127 627 122 HOH HOH . E 5 HOH A 128 628 64 HOH HOH . E 5 HOH A 129 629 181 HOH HOH . E 5 HOH A 130 630 172 HOH HOH . E 5 HOH A 131 631 90 HOH HOH . E 5 HOH A 132 632 31 HOH HOH . E 5 HOH A 133 633 4 HOH HOH . E 5 HOH A 134 634 66 HOH HOH . E 5 HOH A 135 635 101 HOH HOH . E 5 HOH A 136 636 85 HOH HOH . E 5 HOH A 137 637 42 HOH HOH . E 5 HOH A 138 638 115 HOH HOH . E 5 HOH A 139 639 30 HOH HOH . E 5 HOH A 140 640 145 HOH HOH . E 5 HOH A 141 641 120 HOH HOH . E 5 HOH A 142 642 43 HOH HOH . E 5 HOH A 143 643 57 HOH HOH . E 5 HOH A 144 644 49 HOH HOH . E 5 HOH A 145 645 78 HOH HOH . E 5 HOH A 146 646 81 HOH HOH . E 5 HOH A 147 647 16 HOH HOH . E 5 HOH A 148 648 79 HOH HOH . E 5 HOH A 149 649 54 HOH HOH . E 5 HOH A 150 650 117 HOH HOH . E 5 HOH A 151 651 160 HOH HOH . E 5 HOH A 152 652 123 HOH HOH . E 5 HOH A 153 653 35 HOH HOH . E 5 HOH A 154 654 154 HOH HOH . E 5 HOH A 155 655 132 HOH HOH . E 5 HOH A 156 656 126 HOH HOH . E 5 HOH A 157 657 155 HOH HOH . E 5 HOH A 158 658 82 HOH HOH . E 5 HOH A 159 659 165 HOH HOH . E 5 HOH A 160 660 50 HOH HOH . E 5 HOH A 161 661 144 HOH HOH . E 5 HOH A 162 662 65 HOH HOH . E 5 HOH A 163 663 185 HOH HOH . E 5 HOH A 164 664 95 HOH HOH . E 5 HOH A 165 665 148 HOH HOH . E 5 HOH A 166 666 105 HOH HOH . E 5 HOH A 167 667 134 HOH HOH . E 5 HOH A 168 668 169 HOH HOH . E 5 HOH A 169 669 104 HOH HOH . E 5 HOH A 170 670 75 HOH HOH . E 5 HOH A 171 671 72 HOH HOH . E 5 HOH A 172 672 143 HOH HOH . E 5 HOH A 173 673 153 HOH HOH . E 5 HOH A 174 674 157 HOH HOH . E 5 HOH A 175 675 163 HOH HOH . E 5 HOH A 176 676 182 HOH HOH . E 5 HOH A 177 677 130 HOH HOH . E 5 HOH A 178 678 129 HOH HOH . E 5 HOH A 179 679 183 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ARG . . . D 4 10.323 6.859 18.193 1 25.14 ? N ARG 403 A 1 HETATM 2 C CA ARG . . . D 4 11.2 7.182 19.353 1 24.77 ? CA ARG 403 A 1 HETATM 3 C C ARG . . . D 4 12.231 6.095 19.618 1 24.78 ? C ARG 403 A 1 HETATM 4 O O ARG . . . D 4 12.183 4.986 19.08 1 25.23 ? O ARG 403 A 1 HETATM 5 C CB ARG . . . D 4 10.375 7.355 20.625 1 24.51 ? CB ARG 403 A 1 HETATM 6 C CG ARG . . . D 4 9.318 8.431 20.561 1 24.25 ? CG ARG 403 A 1 HETATM 7 C CD ARG . . . D 4 9.887 9.837 20.491 1 24.08 ? CD ARG 403 A 1 HETATM 8 N NE ARG . . . D 4 8.861 10.77 20.944 1 24.24 ? NE ARG 403 A 1 HETATM 9 C CZ ARG . . . D 4 8.601 11.057 22.217 1 24.01 ? CZ ARG 403 A 1 HETATM 10 N NH1 ARG . . . D 4 9.313 10.519 23.204 1 24.32 ? NH1 ARG 403 A 1 HETATM 11 N NH2 ARG . . . D 4 7.617 11.895 22.507 1 24.04 ? NH2 ARG 403 A 1 HETATM 12 O OXT ARG . . . D 4 13.125 6.315 20.43 1 24.54 ? OXT ARG 403 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #