data_6AMF # _model_server_result.job_id ZnsIFppNoqlV3SOVRFo2dg _model_server_result.datetime_utc '2024-11-22 17:27:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6amf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6AMF # _exptl.entry_id 6AMF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.32 _cell.angle_gamma 90 _cell.entry_id 6AMF _cell.length_a 31.14 _cell.length_b 60.316 _cell.length_c 38.567 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 21 A ASP 21 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.841 ? metalc ? metalc2 A OD1 ASP 40 A ASP 40 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? metalc ? metalc4 A OE2 GLU 43 A GLU 43 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc5 C CA CA . A CA 202 1_555 D O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc6 C CA CA . A CA 202 1_555 D O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.975 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6AMF _atom_sites.fract_transf_matrix[1][1] 0.032113 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002424 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 THP A 1 201 142 THP THP . C 3 CA A 1 202 1 CA CA . D 4 HOH A 1 301 60 HOH HOH . D 4 HOH A 2 302 15 HOH HOH . D 4 HOH A 3 303 32 HOH HOH . D 4 HOH A 4 304 36 HOH HOH . D 4 HOH A 5 305 66 HOH HOH . D 4 HOH A 6 306 57 HOH HOH . D 4 HOH A 7 307 10 HOH HOH . D 4 HOH A 8 308 28 HOH HOH . D 4 HOH A 9 309 33 HOH HOH . D 4 HOH A 10 310 35 HOH HOH . D 4 HOH A 11 311 14 HOH HOH . D 4 HOH A 12 312 78 HOH HOH . D 4 HOH A 13 313 1 HOH HOH . D 4 HOH A 14 314 52 HOH HOH . D 4 HOH A 15 315 26 HOH HOH . D 4 HOH A 16 316 21 HOH HOH . D 4 HOH A 17 317 63 HOH HOH . D 4 HOH A 18 318 53 HOH HOH . D 4 HOH A 19 319 70 HOH HOH . D 4 HOH A 20 320 65 HOH HOH . D 4 HOH A 21 321 13 HOH HOH . D 4 HOH A 22 322 23 HOH HOH . D 4 HOH A 23 323 39 HOH HOH . D 4 HOH A 24 324 31 HOH HOH . D 4 HOH A 25 325 3 HOH HOH . D 4 HOH A 26 326 8 HOH HOH . D 4 HOH A 27 327 80 HOH HOH . D 4 HOH A 28 328 12 HOH HOH . D 4 HOH A 29 329 22 HOH HOH . D 4 HOH A 30 330 85 HOH HOH . D 4 HOH A 31 331 71 HOH HOH . D 4 HOH A 32 332 11 HOH HOH . D 4 HOH A 33 333 74 HOH HOH . D 4 HOH A 34 334 19 HOH HOH . D 4 HOH A 35 335 84 HOH HOH . D 4 HOH A 36 336 40 HOH HOH . D 4 HOH A 37 337 59 HOH HOH . D 4 HOH A 38 338 18 HOH HOH . D 4 HOH A 39 339 5 HOH HOH . D 4 HOH A 40 340 47 HOH HOH . D 4 HOH A 41 341 58 HOH HOH . D 4 HOH A 42 342 67 HOH HOH . D 4 HOH A 43 343 34 HOH HOH . D 4 HOH A 44 344 2 HOH HOH . D 4 HOH A 45 345 62 HOH HOH . D 4 HOH A 46 346 6 HOH HOH . D 4 HOH A 47 347 27 HOH HOH . D 4 HOH A 48 348 54 HOH HOH . D 4 HOH A 49 349 51 HOH HOH . D 4 HOH A 50 350 56 HOH HOH . D 4 HOH A 51 351 73 HOH HOH . D 4 HOH A 52 352 30 HOH HOH . D 4 HOH A 53 353 4 HOH HOH . D 4 HOH A 54 354 17 HOH HOH . D 4 HOH A 55 355 79 HOH HOH . D 4 HOH A 56 356 81 HOH HOH . D 4 HOH A 57 357 24 HOH HOH . D 4 HOH A 58 358 72 HOH HOH . D 4 HOH A 59 359 38 HOH HOH . D 4 HOH A 60 360 76 HOH HOH . D 4 HOH A 61 361 82 HOH HOH . D 4 HOH A 62 362 29 HOH HOH . D 4 HOH A 63 363 68 HOH HOH . D 4 HOH A 64 364 37 HOH HOH . D 4 HOH A 65 365 61 HOH HOH . D 4 HOH A 66 366 9 HOH HOH . D 4 HOH A 67 367 25 HOH HOH . D 4 HOH A 68 368 77 HOH HOH . D 4 HOH A 69 369 55 HOH HOH . D 4 HOH A 70 370 69 HOH HOH . D 4 HOH A 71 371 42 HOH HOH . D 4 HOH A 72 372 41 HOH HOH . D 4 HOH A 73 373 44 HOH HOH . D 4 HOH A 74 374 75 HOH HOH . D 4 HOH A 75 375 64 HOH HOH . D 4 HOH A 76 376 83 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.669 _atom_site.Cartn_y 11.13 _atom_site.Cartn_z 8.336 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #