data_6AMX
#
_model_server_result.job_id            hXxxd-5-Rv4XeYSA1CMUGA 
_model_server_result.datetime_utc      '2024-11-05 04:12:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6amx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6AMX 
#
_exptl.entry_id    6AMX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.489 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6AMX 
_cell.length_a            96.22 
_cell.length_b            96.22 
_cell.length_c            60.93 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AMX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
_chem_comp.formula           'C18 H38 O9' 
_chem_comp.formula_weight    398.489 
_chem_comp.id                PE5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL;POLYETHYLENE GLYCOL PEG400' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C48 C50 PE5 sing 237 n n 
C48 H481 PE5 sing 238 n n 
C48 H482 PE5 sing 239 n n 
C48 H483 PE5 sing 240 n n 
C50 O1 PE5 sing 241 n n 
C50 H501 PE5 sing 242 n n 
C50 H502 PE5 sing 243 n n 
O1 C1 PE5 sing 244 n n 
C1 C2 PE5 sing 245 n n 
C1 H11 PE5 sing 246 n n 
C1 H12 PE5 sing 247 n n 
C2 O2 PE5 sing 248 n n 
C2 H21 PE5 sing 249 n n 
C2 H22 PE5 sing 250 n n 
O2 C3 PE5 sing 251 n n 
C3 C4 PE5 sing 252 n n 
C3 H31 PE5 sing 253 n n 
C3 H32 PE5 sing 254 n n 
C4 O3 PE5 sing 255 n n 
C4 H41 PE5 sing 256 n n 
C4 H42 PE5 sing 257 n n 
O3 C5 PE5 sing 258 n n 
C5 C6 PE5 sing 259 n n 
C5 H51 PE5 sing 260 n n 
C5 H52A PE5 sing 261 n n 
C6 O4 PE5 sing 262 n n 
C6 H61 PE5 sing 263 n n 
C6 H62 PE5 sing 264 n n 
O4 C7 PE5 sing 265 n n 
C7 C8 PE5 sing 266 n n 
C7 H71 PE5 sing 267 n n 
C7 H72 PE5 sing 268 n n 
C8 O5 PE5 sing 269 n n 
C8 H81 PE5 sing 270 n n 
C8 H82 PE5 sing 271 n n 
O5 C9 PE5 sing 272 n n 
C9 C10 PE5 sing 273 n n 
C9 H91 PE5 sing 274 n n 
C9 H92 PE5 sing 275 n n 
C10 O6 PE5 sing 276 n n 
C10 H101 PE5 sing 277 n n 
C10 H102 PE5 sing 278 n n 
O6 C11 PE5 sing 279 n n 
C11 C12 PE5 sing 280 n n 
C11 H111 PE5 sing 281 n n 
C11 H112 PE5 sing 282 n n 
C12 O7 PE5 sing 283 n n 
C12 H121 PE5 sing 284 n n 
C12 H122 PE5 sing 285 n n 
O7 C13 PE5 sing 286 n n 
C13 C14 PE5 sing 287 n n 
C13 H131 PE5 sing 288 n n 
C13 H132 PE5 sing 289 n n 
C14 O8 PE5 sing 290 n n 
C14 H141 PE5 sing 291 n n 
C14 H142 PE5 sing 292 n n 
O8 C15 PE5 sing 293 n n 
C15 C16 PE5 sing 294 n n 
C15 H151 PE5 sing 295 n n 
C15 H152 PE5 sing 296 n n 
C16 O52 PE5 sing 297 n n 
C16 H161 PE5 sing 298 n n 
C16 H162 PE5 sing 299 n n 
O52 H52 PE5 sing 300 n n 
#
_atom_sites.entry_id                     6AMX 
_atom_sites.fract_transf_matrix[1][1]    0.010393 
_atom_sites.fract_transf_matrix[1][2]    0.006 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012001 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016412 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PE5 A 1 301 1 PE5 PE5 . 
C 2 PE5 A 1 302 2 PE5 PE5 . 
D 2 PE5 A 1 303 3 PE5 PE5 . 
E 2 PE5 A 1 304 4 PE5 PE5 . 
F 2 PE5 A 1 305 5 PE5 PE5 . 
G 2 PE5 A 1 306 6 PE5 PE5 . 
H 3 HOH A 1 401 25 HOH HOH . 
H 3 HOH A 2 402 15 HOH HOH . 
H 3 HOH A 3 403 19 HOH HOH . 
H 3 HOH A 4 404 6 HOH HOH . 
H 3 HOH A 5 405 4 HOH HOH . 
H 3 HOH A 6 406 1 HOH HOH . 
H 3 HOH A 7 407 16 HOH HOH . 
H 3 HOH A 8 408 26 HOH HOH . 
H 3 HOH A 9 409 35 HOH HOH . 
H 3 HOH A 10 410 38 HOH HOH . 
H 3 HOH A 11 411 27 HOH HOH . 
H 3 HOH A 12 412 11 HOH HOH . 
H 3 HOH A 13 413 5 HOH HOH . 
H 3 HOH A 14 414 18 HOH HOH . 
H 3 HOH A 15 415 8 HOH HOH . 
H 3 HOH A 16 416 9 HOH HOH . 
H 3 HOH A 17 417 3 HOH HOH . 
H 3 HOH A 18 418 7 HOH HOH . 
H 3 HOH A 19 419 37 HOH HOH . 
H 3 HOH A 20 420 14 HOH HOH . 
H 3 HOH A 21 421 2 HOH HOH . 
H 3 HOH A 22 422 39 HOH HOH . 
H 3 HOH A 23 423 29 HOH HOH . 
H 3 HOH A 24 424 23 HOH HOH . 
H 3 HOH A 25 425 36 HOH HOH . 
H 3 HOH A 26 426 22 HOH HOH . 
H 3 HOH A 27 427 17 HOH HOH . 
H 3 HOH A 28 428 34 HOH HOH . 
H 3 HOH A 29 429 32 HOH HOH . 
H 3 HOH A 30 430 24 HOH HOH . 
H 3 HOH A 31 431 31 HOH HOH . 
H 3 HOH A 32 432 28 HOH HOH . 
H 3 HOH A 33 433 21 HOH HOH . 
H 3 HOH A 34 434 30 HOH HOH . 
H 3 HOH A 35 435 10 HOH HOH . 
H 3 HOH A 36 436 20 HOH HOH . 
H 3 HOH A 37 437 33 HOH HOH . 
H 3 HOH A 38 438 13 HOH HOH . 
H 3 HOH A 39 439 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 PE5 . . . B 2 25.126 -28.597 1.566 1 55.29 ? C4 PE5 301 A 1 
HETATM 2 O O3 PE5 . . . B 2 25.967 -27.593 2.073 1 68.29 ? O3 PE5 301 A 1 
HETATM 3 C C5 PE5 . . . B 2 25.889 -27.349 3.466 1 57.31 ? C5 PE5 301 A 1 
HETATM 4 C C6 PE5 . . . B 2 25.764 -25.841 3.648 1 54.07 ? C6 PE5 301 A 1 
HETATM 5 O O4 PE5 . . . B 2 26.183 -25.38 4.914 1 55.48 ? O4 PE5 301 A 1 
HETATM 6 C C7 PE5 . . . B 2 25.942 -23.989 5.046 1 45.86 ? C7 PE5 301 A 1 
HETATM 7 C C8 PE5 . . . B 2 24.46 -23.717 5.365 1 52.69 ? C8 PE5 301 A 1 
HETATM 8 O O5 PE5 . . . B 2 24.254 -22.333 5.501 1 60.87 ? O5 PE5 301 A 1 
HETATM 9 C C9 PE5 . . . B 2 22.932 -21.881 5.41 1 58.13 ? C9 PE5 301 A 1 
HETATM 10 C C10 PE5 . . . B 2 22.9 -20.393 5.043 1 66.25 ? C10 PE5 301 A 1 
HETATM 11 O O6 PE5 . . . B 2 23.916 -20.062 4.122 1 73.25 ? O6 PE5 301 A 1 
HETATM 12 C C11 PE5 . . . B 2 23.727 -18.882 3.376 1 65.74 ? C11 PE5 301 A 1 
HETATM 13 C C12 PE5 . . . B 2 25.02 -18.06 3.348 1 68.27 ? C12 PE5 301 A 1 
HETATM 14 O O7 PE5 . . . B 2 25.737 -18.177 2.145 1 73.55 ? O7 PE5 301 A 1 
HETATM 15 C C13 PE5 . . . B 2 27.133 -18.34 2.256 1 69.86 ? C13 PE5 301 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           39 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           15 
#