data_6AN1 # _model_server_result.job_id FrDxucK1mGaxkqgpS1Em4Q _model_server_result.datetime_utc '2025-04-25 15:50:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6an1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 6AN1 # _exptl.entry_id 6AN1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 384.381 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-({2-[(1,3-dioxo-1,3-dihydro-2H-inden-2-ylidene)methyl]phenoxy}methyl)benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.65 _cell.angle_gamma 90 _cell.entry_id 6AN1 _cell.length_a 93.321 _cell.length_b 61.366 _cell.length_c 118.45 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AN1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H16 O5' _chem_comp.formula_weight 384.381 _chem_comp.id BKY _chem_comp.mon_nstd_flag . _chem_comp.name '4-({2-[(1,3-dioxo-1,3-dihydro-2H-inden-2-ylidene)methyl]phenoxy}methyl)benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 BKY doub 70 n y C10 C11 BKY sing 71 n y C9 C8 BKY sing 72 n y C11 C12 BKY doub 73 n y C8 O2 BKY sing 74 n n C8 C13 BKY doub 75 n y C12 C13 BKY sing 76 n y C3 C2 BKY doub 77 n y C3 C4 BKY sing 78 n y C7 O2 BKY sing 79 n n C7 C4 BKY sing 80 n n C2 C1 BKY sing 81 n y C4 C5 BKY doub 82 n y C13 C14 BKY sing 83 n n C1 C6 BKY doub 84 n y C1 C BKY sing 85 n n C5 C6 BKY sing 86 n y O C BKY doub 87 n n C O1 BKY sing 88 n n C14 C15 BKY doub 89 n n O3 C16 BKY doub 90 n n C15 C16 BKY sing 91 n n C15 C19 BKY sing 92 n n C16 C17 BKY sing 93 n n O4 C19 BKY doub 94 n n C19 C18 BKY sing 95 n n C17 C18 BKY doub 96 n y C17 C23 BKY sing 97 n y C18 C20 BKY sing 98 n y C23 C22 BKY doub 99 n y C20 C21 BKY doub 100 n y C22 C21 BKY sing 101 n y C2 H1 BKY sing 102 n n C3 H2 BKY sing 103 n n C5 H3 BKY sing 104 n n C6 H4 BKY sing 105 n n C7 H5 BKY sing 106 n n C7 H6 BKY sing 107 n n C9 H7 BKY sing 108 n n C10 H8 BKY sing 109 n n C11 H9 BKY sing 110 n n C12 H10 BKY sing 111 n n C14 H11 BKY sing 112 n n C20 H12 BKY sing 113 n n C21 H13 BKY sing 114 n n C22 H14 BKY sing 115 n n C23 H15 BKY sing 116 n n O1 H16 BKY sing 117 n n # _atom_sites.entry_id 6AN1 _atom_sites.fract_transf_matrix[1][1] 0.010716 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002405 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016296 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008652 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BKY A 1 501 1 BKY 27A . D 3 HOH A 1 601 6 HOH HOH . D 3 HOH A 2 602 7 HOH HOH . D 3 HOH A 3 603 12 HOH HOH . D 3 HOH A 4 604 8 HOH HOH . D 3 HOH A 5 605 11 HOH HOH . D 3 HOH A 6 606 2 HOH HOH . D 3 HOH A 7 607 4 HOH HOH . D 3 HOH A 8 608 9 HOH HOH . E 3 HOH B 1 501 10 HOH HOH . E 3 HOH B 2 502 5 HOH HOH . E 3 HOH B 3 503 3 HOH HOH . E 3 HOH B 4 504 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BKY . A . C 2 9.784 18.634 9.9 0.45 104 ? C1 BKY 501 A 1 HETATM 2 C C1 BKY . B . C 2 15.796 25.474 9.219 0.55 105.88 ? C1 BKY 501 A 1 HETATM 3 C C2 BKY . A . C 2 11.049 18.131 9.613 0.45 104.53 ? C2 BKY 501 A 1 HETATM 4 C C2 BKY . B . C 2 17.077 25.158 8.78 0.55 105.9 ? C2 BKY 501 A 1 HETATM 5 C C3 BKY . A . C 2 12.126 18.987 9.488 0.45 105.22 ? C3 BKY 501 A 1 HETATM 6 C C3 BKY . B . C 2 17.484 23.839 8.666 0.55 106.17 ? C3 BKY 501 A 1 HETATM 7 C C4 BKY . A . C 2 11.983 20.36 9.639 0.45 105.23 ? C4 BKY 501 A 1 HETATM 8 C C4 BKY . B . C 2 16.619 22.802 8.984 0.55 106.24 ? C4 BKY 501 A 1 HETATM 9 C C5 BKY . A . C 2 10.713 20.852 9.913 0.45 104.49 ? C5 BKY 501 A 1 HETATM 10 C C5 BKY . B . C 2 15.335 23.114 9.404 0.55 106.31 ? C5 BKY 501 A 1 HETATM 11 C C6 BKY . A . C 2 9.626 20.008 10.042 0.45 104.07 ? C6 BKY 501 A 1 HETATM 12 C C6 BKY . B . C 2 14.929 24.432 9.519 0.55 106.12 ? C6 BKY 501 A 1 HETATM 13 C C7 BKY . A . C 2 13.164 21.269 9.514 0.45 105.61 ? C7 BKY 501 A 1 HETATM 14 C C7 BKY . B . C 2 17.07 21.367 8.874 0.55 106.34 ? C7 BKY 501 A 1 HETATM 15 C C8 BKY . A . C 2 15.545 21.054 9.267 0.45 105.89 ? C8 BKY 501 A 1 HETATM 16 C C8 BKY . B . C 2 15.729 19.757 10.065 0.55 106.41 ? C8 BKY 501 A 1 HETATM 17 C C9 BKY . A . C 2 15.656 22.176 8.46 0.45 106.35 ? C9 BKY 501 A 1 HETATM 18 C C9 BKY . B . C 2 14.481 20.073 9.55 0.55 106.11 ? C9 BKY 501 A 1 HETATM 19 C C10 BKY . A . C 2 16.91 22.681 8.162 0.45 106.21 ? C10 BKY 501 A 1 HETATM 20 C C10 BKY . B . C 2 13.478 19.119 9.542 0.55 105.51 ? C10 BKY 501 A 1 HETATM 21 C C11 BKY . A . C 2 18.043 22.074 8.66 0.45 106.31 ? C11 BKY 501 A 1 HETATM 22 C C11 BKY . B . C 2 13.715 17.856 10.036 0.55 105.73 ? C11 BKY 501 A 1 HETATM 23 C C12 BKY . A . C 2 17.938 20.957 9.469 0.45 106.33 ? C12 BKY 501 A 1 HETATM 24 C C12 BKY . B . C 2 14.955 17.533 10.556 0.55 106.71 ? C12 BKY 501 A 1 HETATM 25 C C13 BKY . A . C 2 16.683 20.432 9.797 0.45 106.64 ? C13 BKY 501 A 1 HETATM 26 C C13 BKY . B . C 2 15.984 18.481 10.591 0.55 106.94 ? C13 BKY 501 A 1 HETATM 27 C C BKY . A . C 2 8.627 17.712 10.081 0.45 103.66 ? C BKY 501 A 1 HETATM 28 C C BKY . B . C 2 15.384 26.887 9.429 0.55 105.42 ? C BKY 501 A 1 HETATM 29 O O BKY . A . C 2 8.91 16.446 9.944 0.45 103.35 ? O BKY 501 A 1 HETATM 30 O O BKY . B . C 2 16.312 27.771 9.183 0.55 105.31 ? O BKY 501 A 1 HETATM 31 C C14 BKY . A . C 2 16.501 19.313 10.724 0.45 106.79 ? C14 BKY 501 A 1 HETATM 32 C C14 BKY . B . C 2 17.286 18.19 11.193 0.55 107.29 ? C14 BKY 501 A 1 HETATM 33 C C15 BKY . A . C 2 17.316 18.545 11.474 0.45 107.32 ? C15 BKY 501 A 1 HETATM 34 C C15 BKY . B . C 2 17.567 17.684 12.414 0.55 107.48 ? C15 BKY 501 A 1 HETATM 35 C C16 BKY . A . C 2 18.75 18.416 11.809 0.45 107.28 ? C16 BKY 501 A 1 HETATM 36 C C16 BKY . B . C 2 16.671 17.298 13.526 0.55 107.48 ? C16 BKY 501 A 1 HETATM 37 C C17 BKY . A . C 2 18.85 17.372 12.857 0.45 107.56 ? C17 BKY 501 A 1 HETATM 38 C C17 BKY . B . C 2 17.539 16.836 14.632 0.55 107.58 ? C17 BKY 501 A 1 HETATM 39 C C18 BKY . A . C 2 17.588 16.876 13.139 0.45 107.27 ? C18 BKY 501 A 1 HETATM 40 C C18 BKY . B . C 2 18.866 16.911 14.248 0.55 108.45 ? C18 BKY 501 A 1 HETATM 41 C C19 BKY . A . C 2 16.584 17.557 12.292 0.45 107.61 ? C19 BKY 501 A 1 HETATM 42 C C19 BKY . B . C 2 18.952 17.439 12.863 0.55 107.54 ? C19 BKY 501 A 1 HETATM 43 C C20 BKY . A . C 2 17.413 15.913 14.129 0.45 107.61 ? C20 BKY 501 A 1 HETATM 44 C C20 BKY . B . C 2 19.878 16.537 15.127 0.55 107.58 ? C20 BKY 501 A 1 HETATM 45 C C21 BKY . A . C 2 18.52 15.462 14.83 0.45 107.09 ? C21 BKY 501 A 1 HETATM 46 C C21 BKY . B . C 2 19.536 16.094 16.396 0.55 107.61 ? C21 BKY 501 A 1 HETATM 47 C C22 BKY . A . C 2 19.785 15.955 14.545 0.45 107.61 ? C22 BKY 501 A 1 HETATM 48 C C22 BKY . B . C 2 18.207 16.022 16.781 0.55 107.65 ? C22 BKY 501 A 1 HETATM 49 C C23 BKY . A . C 2 19.961 16.91 13.555 0.45 107.36 ? C23 BKY 501 A 1 HETATM 50 C C23 BKY . B . C 2 17.198 16.39 15.905 0.55 107.66 ? C23 BKY 501 A 1 HETATM 51 O O1 BKY . A . C 2 7.507 18.127 10.349 0.45 103.67 ? O1 BKY 501 A 1 HETATM 52 O O1 BKY . B . C 2 14.256 27.179 9.81 0.55 105.01 ? O1 BKY 501 A 1 HETATM 53 O O2 BKY . A . C 2 14.349 20.464 9.577 0.45 106.1 ? O2 BKY 501 A 1 HETATM 54 O O2 BKY . B . C 2 16.783 20.636 10.082 0.55 106.65 ? O2 BKY 501 A 1 HETATM 55 O O3 BKY . A . C 2 19.696 19.031 11.32 0.45 107.22 ? O3 BKY 501 A 1 HETATM 56 O O3 BKY . B . C 2 15.444 17.331 13.554 0.55 107.35 ? O3 BKY 501 A 1 HETATM 57 O O4 BKY . A . C 2 15.38 17.317 12.281 0.45 107.26 ? O4 BKY 501 A 1 HETATM 58 O O4 BKY . B . C 2 19.986 17.631 12.236 0.55 107.49 ? O4 BKY 501 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 58 #