data_6AOH # _model_server_result.job_id 3EryByWD24mC7tTSa7cYFA _model_server_result.datetime_utc '2024-11-24 04:12:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aoh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":702}' # _entry.id 6AOH # _exptl.entry_id 6AOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AOH _cell.length_a 53.209 _cell.length_b 144.343 _cell.length_c 174.189 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 348 n n PA O2A NDP sing 349 n n PA O5B NDP sing 350 n n PA O3 NDP sing 351 n n O2A HOA2 NDP sing 352 n n O5B C5B NDP sing 353 n n C5B C4B NDP sing 354 n n C5B H51A NDP sing 355 n n C5B H52A NDP sing 356 n n C4B O4B NDP sing 357 n n C4B C3B NDP sing 358 n n C4B H4B NDP sing 359 n n O4B C1B NDP sing 360 n n C3B O3B NDP sing 361 n n C3B C2B NDP sing 362 n n C3B H3B NDP sing 363 n n O3B HO3A NDP sing 364 n n C2B O2B NDP sing 365 n n C2B C1B NDP sing 366 n n C2B H2B NDP sing 367 n n O2B P2B NDP sing 368 n n C1B N9A NDP sing 369 n n C1B H1B NDP sing 370 n n N9A C8A NDP sing 371 n y N9A C4A NDP sing 372 n y C8A N7A NDP doub 373 n y C8A H8A NDP sing 374 n n N7A C5A NDP sing 375 n y C5A C6A NDP sing 376 n y C5A C4A NDP doub 377 n y C6A N6A NDP sing 378 n n C6A N1A NDP doub 379 n y N6A H61A NDP sing 380 n n N6A H62A NDP sing 381 n n N1A C2A NDP sing 382 n y C2A N3A NDP doub 383 n y C2A H2A NDP sing 384 n n N3A C4A NDP sing 385 n y O3 PN NDP sing 386 n n PN O1N NDP doub 387 n n PN O2N NDP sing 388 n n PN O5D NDP sing 389 n n O2N H21N NDP sing 390 n n O5D C5D NDP sing 391 n n C5D C4D NDP sing 392 n n C5D H51N NDP sing 393 n n C5D H52N NDP sing 394 n n C4D O4D NDP sing 395 n n C4D C3D NDP sing 396 n n C4D H4D NDP sing 397 n n O4D C1D NDP sing 398 n n C3D O3D NDP sing 399 n n C3D C2D NDP sing 400 n n C3D H3D NDP sing 401 n n O3D HO3N NDP sing 402 n n C2D O2D NDP sing 403 n n C2D C1D NDP sing 404 n n C2D H2D NDP sing 405 n n O2D HO2N NDP sing 406 n n C1D N1N NDP sing 407 n n C1D H1D NDP sing 408 n n N1N C2N NDP sing 409 n n N1N C6N NDP sing 410 n n C2N C3N NDP doub 411 n n C2N H2N NDP sing 412 n n C3N C7N NDP sing 413 n n C3N C4N NDP sing 414 n n C7N O7N NDP doub 415 n n C7N N7N NDP sing 416 n n N7N H71N NDP sing 417 n n N7N H72N NDP sing 418 n n C4N C5N NDP sing 419 n n C4N H41N NDP sing 420 n n C4N H42N NDP sing 421 n n C5N C6N NDP doub 422 n n C5N H5N NDP sing 423 n n C6N H6N NDP sing 424 n n P2B O1X NDP doub 425 n n P2B O2X NDP sing 426 n n P2B O3X NDP sing 427 n n O2X HOP2 NDP sing 428 n n O3X HOP3 NDP sing 429 n n # _atom_sites.entry_id 6AOH _atom_sites.fract_transf_matrix[1][1] 0.018794 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 702 NDP NDP . E 4 CB3 A 1 703 703 CB3 CB3 . F 5 BOD A 1 704 1 BOD 533 . G 2 UMP B 1 701 701 UMP UMP . H 3 NDP B 1 702 702 NDP NDP . I 4 CB3 B 1 703 703 CB3 CB3 . J 5 BOD B 1 704 2 BOD 533 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . H 3 2.915 28.915 -67.938 1 82.65 ? PA NDP 702 B 1 HETATM 2 O O1A NDP . . . H 3 2.324 30.195 -67.405 1 81.96 ? O1A NDP 702 B 1 HETATM 3 O O2A NDP . . . H 3 4.16 28.942 -68.795 1 81.03 ? O2A NDP 702 B 1 HETATM 4 O O5B NDP . . . H 3 1.752 28.176 -68.769 1 88.24 ? O5B NDP 702 B 1 HETATM 5 C C5B NDP . . . H 3 1.863 26.779 -69.022 1 96.68 ? C5B NDP 702 B 1 HETATM 6 C C4B NDP . . . H 3 0.825 26.298 -70.023 1 102.77 ? C4B NDP 702 B 1 HETATM 7 O O4B NDP . . . H 3 0.547 27.29 -71.019 1 105.75 ? O4B NDP 702 B 1 HETATM 8 C C3B NDP . . . H 3 1.36 25.077 -70.747 1 106.1 ? C3B NDP 702 B 1 HETATM 9 O O3B NDP . . . H 3 0.791 23.877 -70.205 1 106.78 ? O3B NDP 702 B 1 HETATM 10 C C2B NDP . . . H 3 1.009 25.289 -72.208 1 109.26 ? C2B NDP 702 B 1 HETATM 11 O O2B NDP . . . H 3 -0.185 24.596 -72.574 1 113.83 ? O2B NDP 702 B 1 HETATM 12 C C1B NDP . . . H 3 0.786 26.787 -72.339 1 107.34 ? C1B NDP 702 B 1 HETATM 13 N N9A NDP . . . H 3 2.004 27.418 -72.921 1 106.75 ? N9A NDP 702 B 1 HETATM 14 C C8A NDP . . . H 3 2.889 28.186 -72.254 1 105.72 ? C8A NDP 702 B 1 HETATM 15 N N7A NDP . . . H 3 3.892 28.604 -73.064 1 105.19 ? N7A NDP 702 B 1 HETATM 16 C C5A NDP . . . H 3 3.658 28.1 -74.289 1 105.44 ? C5A NDP 702 B 1 HETATM 17 C C6A NDP . . . H 3 4.323 28.152 -75.616 1 105.01 ? C6A NDP 702 B 1 HETATM 18 N N6A NDP . . . H 3 5.47 28.848 -75.797 1 105.17 ? N6A NDP 702 B 1 HETATM 19 N N1A NDP . . . H 3 3.749 27.481 -76.642 1 104.26 ? N1A NDP 702 B 1 HETATM 20 C C2A NDP . . . H 3 2.609 26.781 -76.48 1 104.96 ? C2A NDP 702 B 1 HETATM 21 N N3A NDP . . . H 3 1.95 26.693 -75.307 1 105.87 ? N3A NDP 702 B 1 HETATM 22 C C4A NDP . . . H 3 2.413 27.317 -74.191 1 106.08 ? C4A NDP 702 B 1 HETATM 23 O O3 NDP . . . H 3 3.157 27.907 -66.702 1 77.32 ? O3 NDP 702 B 1 HETATM 24 P PN NDP . . . H 3 4.279 28.172 -65.58 1 72.65 ? PN NDP 702 B 1 HETATM 25 O O1N NDP . . . H 3 4.126 27.114 -64.512 1 72.73 ? O1N NDP 702 B 1 HETATM 26 O O2N NDP . . . H 3 5.608 28.349 -66.27 1 71.45 ? O2N NDP 702 B 1 HETATM 27 O O5D NDP . . . H 3 3.834 29.592 -64.968 1 72.47 ? O5D NDP 702 B 1 HETATM 28 C C5D NDP . . . H 3 2.931 29.665 -63.868 1 70.66 ? C5D NDP 702 B 1 HETATM 29 C C4D NDP . . . H 3 3.728 29.956 -62.603 1 69.75 ? C4D NDP 702 B 1 HETATM 30 O O4D NDP . . . H 3 4.423 31.199 -62.744 1 69.41 ? O4D NDP 702 B 1 HETATM 31 C C3D NDP . . . H 3 2.817 30.087 -61.395 1 69.23 ? C3D NDP 702 B 1 HETATM 32 O O3D NDP . . . H 3 3.432 29.431 -60.281 1 67.87 ? O3D NDP 702 B 1 HETATM 33 C C2D NDP . . . H 3 2.73 31.584 -61.157 1 69.56 ? C2D NDP 702 B 1 HETATM 34 O O2D NDP . . . H 3 2.568 31.898 -59.774 1 70.13 ? O2D NDP 702 B 1 HETATM 35 C C1D NDP . . . H 3 4.065 32.088 -61.683 1 69.64 ? C1D NDP 702 B 1 HETATM 36 N N1N NDP . . . H 3 4.038 33.476 -62.157 1 69.8 ? N1N NDP 702 B 1 HETATM 37 C C2N NDP . . . H 3 5.058 34.267 -61.788 1 70.31 ? C2N NDP 702 B 1 HETATM 38 C C3N NDP . . . H 3 5.144 35.601 -62.182 1 69.71 ? C3N NDP 702 B 1 HETATM 39 C C7N NDP . . . H 3 6.308 36.443 -61.733 1 68.79 ? C7N NDP 702 B 1 HETATM 40 O O7N NDP . . . H 3 6.543 37.502 -62.292 1 68.37 ? O7N NDP 702 B 1 HETATM 41 N N7N NDP . . . H 3 7.063 36.015 -60.724 1 68.21 ? N7N NDP 702 B 1 HETATM 42 C C4N NDP . . . H 3 4.069 36.199 -63.062 1 69.11 ? C4N NDP 702 B 1 HETATM 43 C C5N NDP . . . H 3 3.015 35.247 -63.398 1 69.51 ? C5N NDP 702 B 1 HETATM 44 C C6N NDP . . . H 3 3.044 33.931 -62.939 1 69.62 ? C6N NDP 702 B 1 HETATM 45 P P2B NDP . . . H 3 -0.149 23.139 -73.268 1 119.17 ? P2B NDP 702 B 1 HETATM 46 O O1X NDP . . . H 3 0.358 22.217 -72.184 1 120.14 ? O1X NDP 702 B 1 HETATM 47 O O2X NDP . . . H 3 -1.579 22.869 -73.675 1 116.74 ? O2X NDP 702 B 1 HETATM 48 O O3X NDP . . . H 3 0.794 23.301 -74.437 1 121.13 ? O3X NDP 702 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 48 #