data_6AOI # _model_server_result.job_id Vgo18AS2wshd4ZJMUnK2WQ _model_server_result.datetime_utc '2024-10-27 16:19:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aoi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 6AOI # _exptl.entry_id 6AOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AOI _cell.length_a 53.437 _cell.length_b 145.053 _cell.length_c 174.503 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 344 n n PA O2A NDP sing 345 n n PA O5B NDP sing 346 n n PA O3 NDP sing 347 n n O2A HOA2 NDP sing 348 n n O5B C5B NDP sing 349 n n C5B C4B NDP sing 350 n n C5B H51A NDP sing 351 n n C5B H52A NDP sing 352 n n C4B O4B NDP sing 353 n n C4B C3B NDP sing 354 n n C4B H4B NDP sing 355 n n O4B C1B NDP sing 356 n n C3B O3B NDP sing 357 n n C3B C2B NDP sing 358 n n C3B H3B NDP sing 359 n n O3B HO3A NDP sing 360 n n C2B O2B NDP sing 361 n n C2B C1B NDP sing 362 n n C2B H2B NDP sing 363 n n O2B P2B NDP sing 364 n n C1B N9A NDP sing 365 n n C1B H1B NDP sing 366 n n N9A C8A NDP sing 367 n y N9A C4A NDP sing 368 n y C8A N7A NDP doub 369 n y C8A H8A NDP sing 370 n n N7A C5A NDP sing 371 n y C5A C6A NDP sing 372 n y C5A C4A NDP doub 373 n y C6A N6A NDP sing 374 n n C6A N1A NDP doub 375 n y N6A H61A NDP sing 376 n n N6A H62A NDP sing 377 n n N1A C2A NDP sing 378 n y C2A N3A NDP doub 379 n y C2A H2A NDP sing 380 n n N3A C4A NDP sing 381 n y O3 PN NDP sing 382 n n PN O1N NDP doub 383 n n PN O2N NDP sing 384 n n PN O5D NDP sing 385 n n O2N H21N NDP sing 386 n n O5D C5D NDP sing 387 n n C5D C4D NDP sing 388 n n C5D H51N NDP sing 389 n n C5D H52N NDP sing 390 n n C4D O4D NDP sing 391 n n C4D C3D NDP sing 392 n n C4D H4D NDP sing 393 n n O4D C1D NDP sing 394 n n C3D O3D NDP sing 395 n n C3D C2D NDP sing 396 n n C3D H3D NDP sing 397 n n O3D HO3N NDP sing 398 n n C2D O2D NDP sing 399 n n C2D C1D NDP sing 400 n n C2D H2D NDP sing 401 n n O2D HO2N NDP sing 402 n n C1D N1N NDP sing 403 n n C1D H1D NDP sing 404 n n N1N C2N NDP sing 405 n n N1N C6N NDP sing 406 n n C2N C3N NDP doub 407 n n C2N H2N NDP sing 408 n n C3N C7N NDP sing 409 n n C3N C4N NDP sing 410 n n C7N O7N NDP doub 411 n n C7N N7N NDP sing 412 n n N7N H71N NDP sing 413 n n N7N H72N NDP sing 414 n n C4N C5N NDP sing 415 n n C4N H41N NDP sing 416 n n C4N H42N NDP sing 417 n n C5N C6N NDP doub 418 n n C5N H5N NDP sing 419 n n C6N H6N NDP sing 420 n n P2B O1X NDP doub 421 n n P2B O2X NDP sing 422 n n P2B O3X NDP sing 423 n n O2X HOP2 NDP sing 424 n n O3X HOP3 NDP sing 425 n n # _atom_sites.entry_id 6AOI _atom_sites.fract_transf_matrix[1][1] 0.018714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005731 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 702 NDP NDP . E 4 CB3 A 1 703 703 CB3 CB3 . F 5 BOJ A 1 704 1 BOJ 528 . G 2 UMP B 1 701 701 UMP UMP . H 3 NDP B 1 702 702 NDP NDP . I 4 CB3 B 1 703 703 CB3 CB3 . J 5 BOJ B 1 704 2 BOJ 528 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . D 3 27.349 108.451 -76.867 1 87.43 ? PA NDP 702 A 1 HETATM 2 O O1A NDP . . . D 3 28.176 107.227 -77.171 1 79.8 ? O1A NDP 702 A 1 HETATM 3 O O2A NDP . . . D 3 25.864 108.33 -76.593 1 85.95 ? O2A NDP 702 A 1 HETATM 4 O O5B NDP . . . D 3 27.538 109.467 -78.098 1 93.98 ? O5B NDP 702 A 1 HETATM 5 C C5B NDP . . . D 3 27.07 110.815 -78.005 1 101.11 ? C5B NDP 702 A 1 HETATM 6 C C4B NDP . . . D 3 27.047 111.405 -79.406 1 104.83 ? C4B NDP 702 A 1 HETATM 7 O O4B NDP . . . D 3 26.594 110.411 -80.345 1 105.93 ? O4B NDP 702 A 1 HETATM 8 C C3B NDP . . . D 3 26.101 112.591 -79.558 1 104.29 ? C3B NDP 702 A 1 HETATM 9 O O3B NDP . . . D 3 26.744 113.856 -79.342 1 97.41 ? O3B NDP 702 A 1 HETATM 10 C C2B NDP . . . D 3 25.676 112.431 -80.997 1 107.49 ? C2B NDP 702 A 1 HETATM 11 O O2B NDP . . . D 3 26.803 112.762 -81.799 1 108.27 ? O2B NDP 702 A 1 HETATM 12 C C1B NDP . . . D 3 25.533 110.935 -81.153 1 109.71 ? C1B NDP 702 A 1 HETATM 13 N N9A NDP . . . D 3 24.197 110.426 -80.712 1 116.27 ? N9A NDP 702 A 1 HETATM 14 C C8A NDP . . . D 3 23.973 109.619 -79.653 1 118.69 ? C8A NDP 702 A 1 HETATM 15 N N7A NDP . . . D 3 22.656 109.32 -79.514 1 120.28 ? N7A NDP 702 A 1 HETATM 16 C C5A NDP . . . D 3 21.997 109.943 -80.507 1 122.22 ? C5A NDP 702 A 1 HETATM 17 C C6A NDP . . . D 3 20.58 110.049 -80.949 1 122.48 ? C6A NDP 702 A 1 HETATM 18 N N6A NDP . . . D 3 19.596 109.407 -80.272 1 119.57 ? N6A NDP 702 A 1 HETATM 19 N N1A NDP . . . D 3 20.309 110.806 -82.045 1 122.81 ? N1A NDP 702 A 1 HETATM 20 C C2A NDP . . . D 3 21.285 111.447 -82.723 1 122.18 ? C2A NDP 702 A 1 HETATM 21 N N3A NDP . . . D 3 22.591 111.391 -82.379 1 124.62 ? N3A NDP 702 A 1 HETATM 22 C C4A NDP . . . D 3 23.012 110.67 -81.299 1 122.55 ? C4A NDP 702 A 1 HETATM 23 O O3 NDP . . . D 3 28.085 109.313 -75.713 1 89.03 ? O3 NDP 702 A 1 HETATM 24 P PN NDP . . . D 3 27.64 109.408 -74.165 1 88.3 ? PN NDP 702 A 1 HETATM 25 O O1N NDP . . . D 3 28.557 110.426 -73.528 1 93.07 ? O1N NDP 702 A 1 HETATM 26 O O2N NDP . . . D 3 26.142 109.596 -74.069 1 88.22 ? O2N NDP 702 A 1 HETATM 27 O O5D NDP . . . D 3 28.053 107.959 -73.599 1 85.61 ? O5D NDP 702 A 1 HETATM 28 C C5D NDP . . . D 3 29.407 107.535 -73.734 1 85.03 ? C5D NDP 702 A 1 HETATM 29 C C4D NDP . . . D 3 30.065 107.454 -72.36 1 82.43 ? C4D NDP 702 A 1 HETATM 30 O O4D NDP . . . D 3 29.654 106.25 -71.711 1 81.57 ? O4D NDP 702 A 1 HETATM 31 C C3D NDP . . . D 3 31.575 107.368 -72.472 1 81.69 ? C3D NDP 702 A 1 HETATM 32 O O3D NDP . . . D 3 32.142 107.959 -71.295 1 76.28 ? O3D NDP 702 A 1 HETATM 33 C C2D NDP . . . D 3 31.844 105.871 -72.533 1 82.91 ? C2D NDP 702 A 1 HETATM 34 O O2D NDP . . . D 3 33.124 105.531 -71.989 1 82.72 ? O2D NDP 702 A 1 HETATM 35 C C1D NDP . . . D 3 30.699 105.268 -71.722 1 81.88 ? C1D NDP 702 A 1 HETATM 36 N N1N NDP . . . D 3 30.125 104.017 -72.227 1 81.54 ? N1N NDP 702 A 1 HETATM 37 C C2N NDP . . . D 3 29.913 103.038 -71.336 1 85.22 ? C2N NDP 702 A 1 HETATM 38 C C3N NDP . . . D 3 29.345 101.808 -71.676 1 88.4 ? C3N NDP 702 A 1 HETATM 39 C C7N NDP . . . D 3 29.163 100.756 -70.607 1 89.46 ? C7N NDP 702 A 1 HETATM 40 O O7N NDP . . . D 3 28.537 99.732 -70.847 1 86.25 ? O7N NDP 702 A 1 HETATM 41 N N7N NDP . . . D 3 29.705 100.96 -69.404 1 89.51 ? N7N NDP 702 A 1 HETATM 42 C C4N NDP . . . D 3 28.927 101.536 -73.108 1 86.09 ? C4N NDP 702 A 1 HETATM 43 C C5N NDP . . . D 3 29.206 102.678 -73.979 1 86.19 ? C5N NDP 702 A 1 HETATM 44 C C6N NDP . . . D 3 29.776 103.864 -73.514 1 83.66 ? C6N NDP 702 A 1 HETATM 45 P P2B NDP . . . D 3 26.799 113.877 -82.949 1 106.42 ? P2B NDP 702 A 1 HETATM 46 O O1X NDP . . . D 3 26.847 115.181 -82.187 1 104.59 ? O1X NDP 702 A 1 HETATM 47 O O2X NDP . . . D 3 28.065 113.558 -83.706 1 107.55 ? O2X NDP 702 A 1 HETATM 48 O O3X NDP . . . D 3 25.519 113.618 -83.71 1 102.17 ? O3X NDP 702 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #