data_6AOI # _model_server_result.job_id EKBePla0ZUls7wjQlt8oDg _model_server_result.datetime_utc '2024-10-27 16:14:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aoi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 6AOI # _exptl.entry_id 6AOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.469 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AOI _cell.length_a 53.437 _cell.length_b 145.053 _cell.length_c 174.503 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # _chem_comp.formula 'C24 H23 N5 O6' _chem_comp.formula_weight 477.469 _chem_comp.id CB3 _chem_comp.mon_nstd_flag . _chem_comp.name '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 CB3 sing 119 n y N1 C8A CB3 sing 120 n y N1 HN1 CB3 sing 121 n n C2 NA2 CB3 sing 122 n n C2 N3 CB3 doub 123 n y NA2 HN21 CB3 sing 124 n n NA2 HN22 CB3 sing 125 n n N3 C4 CB3 sing 126 n y C4 O4 CB3 doub 127 n n C4 C4A CB3 sing 128 n y C4A C5 CB3 doub 129 n y C4A C8A CB3 sing 130 n y C5 C6 CB3 sing 131 n y C5 H5 CB3 sing 132 n n C6 C7 CB3 doub 133 n y C6 C9 CB3 sing 134 n n C7 C8 CB3 sing 135 n y C7 H7 CB3 sing 136 n n C8 C8A CB3 doub 137 n y C8 H8 CB3 sing 138 n n C9 N10 CB3 sing 139 n n C9 H91 CB3 sing 140 n n C9 H92 CB3 sing 141 n n N10 C14 CB3 sing 142 n n N10 CP1 CB3 sing 143 n n C11 C12 CB3 doub 144 n y C11 C16 CB3 sing 145 n y C11 C CB3 sing 146 n n C12 C13 CB3 sing 147 n y C12 H12 CB3 sing 148 n n C13 C14 CB3 doub 149 n y C13 H13 CB3 sing 150 n n C14 C15 CB3 sing 151 n y C15 C16 CB3 doub 152 n y C15 H15 CB3 sing 153 n n C16 H16 CB3 sing 154 n n C O CB3 doub 155 n n C N CB3 sing 156 n n N CA CB3 sing 157 n n N HN CB3 sing 158 n n CA CB CB3 sing 159 n n CA CT CB3 sing 160 n n CA HA CB3 sing 161 n n CB CG CB3 sing 162 n n CB HB1 CB3 sing 163 n n CB HB2 CB3 sing 164 n n CG CD CB3 sing 165 n n CG HG1 CB3 sing 166 n n CG HG2 CB3 sing 167 n n CD OE1 CB3 doub 168 n n CD OE2 CB3 sing 169 n n OE2 HOE2 CB3 sing 170 n n CT O1 CB3 doub 171 n n CT O2 CB3 sing 172 n n O2 HO2 CB3 sing 173 n n CP1 CP2 CB3 sing 174 n n CP1 HP11 CB3 sing 175 n n CP1 HP12 CB3 sing 176 n n CP2 CP3 CB3 trip 177 n n CP3 HP3 CB3 sing 178 n n # _atom_sites.entry_id 6AOI _atom_sites.fract_transf_matrix[1][1] 0.018714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005731 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 702 NDP NDP . E 4 CB3 A 1 703 703 CB3 CB3 . F 5 BOJ A 1 704 1 BOJ 528 . G 2 UMP B 1 701 701 UMP UMP . H 3 NDP B 1 702 702 NDP NDP . I 4 CB3 B 1 703 703 CB3 CB3 . J 5 BOJ B 1 704 2 BOJ 528 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CB3 . . . E 4 17.259 83.053 -30.97 0.5 55.28 ? N1 CB3 703 A 1 HETATM 2 C C2 CB3 . . . E 4 16.49 82.801 -32.047 0.5 55.51 ? C2 CB3 703 A 1 HETATM 3 N NA2 CB3 . . . E 4 15.287 82.202 -31.874 0.5 54.56 ? NA2 CB3 703 A 1 HETATM 4 N N3 CB3 . . . E 4 16.874 83.111 -33.312 0.5 56.35 ? N3 CB3 703 A 1 HETATM 5 C C4 CB3 . . . E 4 18.058 83.705 -33.578 0.5 56.33 ? C4 CB3 703 A 1 HETATM 6 O O4 CB3 . . . E 4 18.399 83.984 -34.748 0.5 55.35 ? O4 CB3 703 A 1 HETATM 7 C C4A CB3 . . . E 4 18.941 84.009 -32.431 0.5 56.25 ? C4A CB3 703 A 1 HETATM 8 C C5 CB3 . . . E 4 20.176 84.619 -32.585 0.5 57.17 ? C5 CB3 703 A 1 HETATM 9 C C6 CB3 . . . E 4 20.949 84.875 -31.456 0.5 57.76 ? C6 CB3 703 A 1 HETATM 10 C C7 CB3 . . . E 4 20.496 84.526 -30.18 0.5 57.41 ? C7 CB3 703 A 1 HETATM 11 C C8 CB3 . . . E 4 19.258 83.912 -29.986 0.5 56.42 ? C8 CB3 703 A 1 HETATM 12 C C8A CB3 . . . E 4 18.456 83.639 -31.086 0.5 55.79 ? C8A CB3 703 A 1 HETATM 13 C C9 CB3 . . . E 4 22.296 85.536 -31.627 0.5 57.51 ? C9 CB3 703 A 1 HETATM 14 N N10 CB3 . . . E 4 22.421 86.097 -32.969 0.5 57.91 ? N10 CB3 703 A 1 HETATM 15 C C11 CB3 . . . E 4 19.669 88.911 -34.394 0.5 63.2 ? C11 CB3 703 A 1 HETATM 16 C C12 CB3 . . . E 4 20.775 88.571 -35.164 0.5 60.6 ? C12 CB3 703 A 1 HETATM 17 C C13 CB3 . . . E 4 21.687 87.634 -34.686 0.5 58.86 ? C13 CB3 703 A 1 HETATM 18 C C14 CB3 . . . E 4 21.493 87.031 -33.448 0.5 58.9 ? C14 CB3 703 A 1 HETATM 19 C C15 CB3 . . . E 4 20.388 87.376 -32.68 0.5 60.62 ? C15 CB3 703 A 1 HETATM 20 C C16 CB3 . . . E 4 19.479 88.314 -33.154 0.5 61.87 ? C16 CB3 703 A 1 HETATM 21 C C CB3 . . . E 4 18.669 89.922 -34.877 0.5 65.77 ? C CB3 703 A 1 HETATM 22 O O CB3 . . . E 4 17.925 90.443 -34.063 0.5 66.88 ? O CB3 703 A 1 HETATM 23 N N CB3 . . . E 4 18.612 90.235 -36.166 0.5 67.45 ? N CB3 703 A 1 HETATM 24 C CA CB3 . . . E 4 19.455 91.273 -36.72 0.5 70.61 ? CA CB3 703 A 1 HETATM 25 C CB CB3 . . . E 4 19.43 91.202 -38.241 0.5 74.48 ? CB CB3 703 A 1 HETATM 26 C CG CB3 . . . E 4 20.549 90.291 -38.736 0.5 77.93 ? CG CB3 703 A 1 HETATM 27 C CD CB3 . . . E 4 20.269 89.895 -40.165 0.5 80.01 ? CD CB3 703 A 1 HETATM 28 O OE1 CB3 . . . E 4 20.395 88.693 -40.499 0.5 77.82 ? OE1 CB3 703 A 1 HETATM 29 O OE2 CB3 . . . E 4 19.914 90.795 -40.957 0.5 82.29 ? OE2 CB3 703 A 1 HETATM 30 C CT CB3 . . . E 4 19.043 92.64 -36.26 0.5 69.58 ? CT CB3 703 A 1 HETATM 31 O O1 CB3 . . . E 4 18.952 92.843 -35.032 0.5 68.61 ? O1 CB3 703 A 1 HETATM 32 O O2 CB3 . . . E 4 18.817 93.523 -37.117 0.5 69 ? O2 CB3 703 A 1 HETATM 33 C CP1 CB3 . . . E 4 23.55 85.723 -33.806 0.5 58.95 ? CP1 CB3 703 A 1 HETATM 34 C CP2 CB3 . . . E 4 23.149 84.745 -34.834 0.5 60.53 ? CP2 CB3 703 A 1 HETATM 35 C CP3 CB3 . . . E 4 22.83 83.894 -35.743 0.5 60.42 ? CP3 CB3 703 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 35 #