data_6AOI # _model_server_result.job_id gkRzWYHSLQabXyx-gqPLBg _model_server_result.datetime_utc '2024-10-27 16:29:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aoi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":704}' # _entry.id 6AOI # _exptl.entry_id 6AOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.413 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(4-phenylpiperazin-1-yl)-6-propylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AOI _cell.length_a 53.437 _cell.length_b 145.053 _cell.length_c 174.503 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # _chem_comp.formula 'C17 H24 N6' _chem_comp.formula_weight 312.413 _chem_comp.id BOJ _chem_comp.mon_nstd_flag . _chem_comp.name 5-(4-phenylpiperazin-1-yl)-6-propylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C10 BOJ sing 70 n n C9 N5 BOJ sing 71 n n C12 C13 BOJ doub 72 n y C12 C11 BOJ sing 73 n y C13 C14 BOJ sing 74 n y C10 N4 BOJ sing 75 n n N5 C11 BOJ sing 76 n n N5 C8 BOJ sing 77 n n C11 C16 BOJ doub 78 n y C14 C15 BOJ doub 79 n y C8 C7 BOJ sing 80 n n C16 C15 BOJ sing 81 n y N4 C7 BOJ sing 82 n n N4 C4 BOJ sing 83 n n N3 C5 BOJ sing 84 n n C4 C5 BOJ doub 85 n y C4 C3 BOJ sing 86 n y C5 N BOJ sing 87 n y C2 C3 BOJ sing 88 n n C2 C1 BOJ sing 89 n n C3 N1 BOJ doub 90 n y N C6 BOJ doub 91 n y C1 C BOJ sing 92 n n N1 C6 BOJ sing 93 n y C6 N2 BOJ sing 94 n n C15 H1 BOJ sing 95 n n C1 H2 BOJ sing 96 n n C1 H3 BOJ sing 97 n n C2 H4 BOJ sing 98 n n C2 H5 BOJ sing 99 n n C8 H6 BOJ sing 100 n n C8 H7 BOJ sing 101 n n C7 H8 BOJ sing 102 n n C7 H9 BOJ sing 103 n n C9 H10 BOJ sing 104 n n C9 H11 BOJ sing 105 n n N3 H12 BOJ sing 106 n n N3 H13 BOJ sing 107 n n N2 H14 BOJ sing 108 n n N2 H15 BOJ sing 109 n n C H16 BOJ sing 110 n n C H17 BOJ sing 111 n n C H18 BOJ sing 112 n n C10 H19 BOJ sing 113 n n C10 H20 BOJ sing 114 n n C16 H21 BOJ sing 115 n n C14 H22 BOJ sing 116 n n C13 H23 BOJ sing 117 n n C12 H24 BOJ sing 118 n n # _atom_sites.entry_id 6AOI _atom_sites.fract_transf_matrix[1][1] 0.018714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005731 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 701 701 UMP UMP . D 3 NDP A 1 702 702 NDP NDP . E 4 CB3 A 1 703 703 CB3 CB3 . F 5 BOJ A 1 704 1 BOJ 528 . G 2 UMP B 1 701 701 UMP UMP . H 3 NDP B 1 702 702 NDP NDP . I 4 CB3 B 1 703 703 CB3 CB3 . J 5 BOJ B 1 704 2 BOJ 528 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C15 BOJ . . . J 5 -1.571 36.936 -59.966 1 68.64 ? C15 BOJ 704 B 1 HETATM 2 C C1 BOJ . . . J 5 2.439 41.072 -59.295 1 71.5 ? C1 BOJ 704 B 1 HETATM 3 C C2 BOJ . . . J 5 2.714 39.992 -60.337 1 67.55 ? C2 BOJ 704 B 1 HETATM 4 C C3 BOJ . . . J 5 3.797 40.424 -61.312 1 65.27 ? C3 BOJ 704 B 1 HETATM 5 C C8 BOJ . . . J 5 1.624 36.852 -62.806 1 68.18 ? C8 BOJ 704 B 1 HETATM 6 C C4 BOJ . . . J 5 3.877 39.864 -62.588 1 65.13 ? C4 BOJ 704 B 1 HETATM 7 C C5 BOJ . . . J 5 4.887 40.289 -63.451 1 64.55 ? C5 BOJ 704 B 1 HETATM 8 C C6 BOJ . . . J 5 5.674 41.753 -61.808 1 60.09 ? C6 BOJ 704 B 1 HETATM 9 C C7 BOJ . . . J 5 2.898 37.574 -62.357 1 67.34 ? C7 BOJ 704 B 1 HETATM 10 C C9 BOJ . . . J 5 0.641 38.936 -63.835 1 70.49 ? C9 BOJ 704 B 1 HETATM 11 N N3 BOJ . . . J 5 4.995 39.767 -64.705 1 66.35 ? N3 BOJ 704 B 1 HETATM 12 N N BOJ . . . J 5 5.769 41.227 -63.044 1 60.07 ? N BOJ 704 B 1 HETATM 13 N N2 BOJ . . . J 5 6.571 42.691 -61.445 1 62.25 ? N2 BOJ 704 B 1 HETATM 14 N N1 BOJ . . . J 5 4.706 41.361 -60.95 1 60.43 ? N1 BOJ 704 B 1 HETATM 15 C C BOJ . . . J 5 0.995 41.01 -58.808 1 70.62 ? C BOJ 704 B 1 HETATM 16 N N4 BOJ . . . J 5 2.964 38.881 -63.022 1 66.62 ? N4 BOJ 704 B 1 HETATM 17 C C10 BOJ . . . J 5 2.115 39.185 -64.169 1 69.66 ? C10 BOJ 704 B 1 HETATM 18 N N5 BOJ . . . J 5 0.59 37.882 -62.832 1 70.12 ? N5 BOJ 704 B 1 HETATM 19 C C11 BOJ . . . J 5 -0.443 37.903 -61.88 1 71.14 ? C11 BOJ 704 B 1 HETATM 20 C C16 BOJ . . . J 5 -0.552 36.893 -60.919 1 69.9 ? C16 BOJ 704 B 1 HETATM 21 C C14 BOJ . . . J 5 -2.486 37.993 -59.971 1 69.13 ? C14 BOJ 704 B 1 HETATM 22 C C13 BOJ . . . J 5 -2.388 39.008 -60.926 1 70.49 ? C13 BOJ 704 B 1 HETATM 23 C C12 BOJ . . . J 5 -1.365 38.96 -61.878 1 72.12 ? C12 BOJ 704 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 23 #