data_6AOM
#
_model_server_result.job_id            cVDscUJpvNZpkKdLN3BdiQ 
_model_server_result.datetime_utc      '2025-01-10 20:18:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6aom 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":409}' 
#
_entry.id    6AOM 
#
_exptl.entry_id    6AOM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              396.863 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl 2-[2-(2-benzylphenyl)ethyl]-3-chloro-4,6-dihydroxybenzoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AOM 
_cell.length_a            65.454 
_cell.length_b            84.233 
_cell.length_c            94.966 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AOM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,V 1 1 
B,M,N,O,P,Q,R,S,T,U,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 K N N 
? 3 U N N 
#
_chem_comp.formula           'C23 H21 Cl O4' 
_chem_comp.formula_weight    396.863 
_chem_comp.id                VC5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl 2-[2-(2-benzylphenyl)ethyl]-3-chloro-4,6-dihydroxybenzoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C02 VC5 sing 456 n n 
C02 C03 VC5 doub 457 n y 
C02 C24 VC5 sing 458 n y 
O28 C25 VC5 doub 459 n n 
C03 C04 VC5 sing 460 n y 
C25 C24 VC5 sing 461 n n 
C25 O26 VC5 sing 462 n n 
C27 O26 VC5 sing 463 n n 
C24 C08 VC5 doub 464 n y 
C04 O05 VC5 sing 465 n n 
C04 C06 VC5 doub 466 n y 
C16 C17 VC5 doub 467 n y 
C16 C15 VC5 sing 468 n y 
C17 C18 VC5 sing 469 n y 
C08 C06 VC5 sing 470 n y 
C08 C09 VC5 sing 471 n n 
C06 CL7 VC5 sing 472 n n 
C15 C14 VC5 doub 473 n y 
C18 C19 VC5 doub 474 n y 
C09 C10 VC5 sing 475 n n 
C19 C14 VC5 sing 476 n y 
C14 C13 VC5 sing 477 n n 
C10 C11 VC5 sing 478 n n 
C13 C12 VC5 sing 479 n n 
C11 C12 VC5 doub 480 n y 
C11 C23 VC5 sing 481 n y 
C12 C20 VC5 sing 482 n y 
C23 C22 VC5 doub 483 n y 
C20 C21 VC5 doub 484 n y 
C22 C21 VC5 sing 485 n y 
O01 H1 VC5 sing 486 n n 
C03 H2 VC5 sing 487 n n 
O05 H3 VC5 sing 488 n n 
C09 H4 VC5 sing 489 n n 
C09 H5 VC5 sing 490 n n 
C10 H6 VC5 sing 491 n n 
C10 H7 VC5 sing 492 n n 
C13 H8 VC5 sing 493 n n 
C13 H9 VC5 sing 494 n n 
C15 H10 VC5 sing 495 n n 
C16 H11 VC5 sing 496 n n 
C17 H12 VC5 sing 497 n n 
C18 H13 VC5 sing 498 n n 
C19 H14 VC5 sing 499 n n 
C20 H15 VC5 sing 500 n n 
C21 H16 VC5 sing 501 n n 
C22 H17 VC5 sing 502 n n 
C23 H18 VC5 sing 503 n n 
C27 H19 VC5 sing 504 n n 
C27 H20 VC5 sing 505 n n 
C27 H21 VC5 sing 506 n n 
#
_atom_sites.entry_id                     6AOM 
_atom_sites.fract_transf_matrix[1][1]    0.015278 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011872 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01053 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P33 A 1 401 4 P33 PEG . 
D 2 P33 A 1 402 5 P33 PEG . 
E 2 P33 A 1 403 6 P33 PEG . 
F 2 P33 A 1 404 7 P33 PEG . 
G 2 P33 A 1 405 12 P33 PEG . 
H 2 P33 A 1 406 13 P33 PEG . 
I 2 P33 A 1 407 21 P33 PEG . 
J 2 P33 A 1 408 22 P33 PEG . 
K 3 VC5 A 1 409 1 VC5 VC5 . 
L 4 GOL A 1 410 1 GOL GOL . 
M 2 P33 B 1 401 3 P33 PEG . 
N 2 P33 B 1 402 8 P33 PEG . 
O 2 P33 B 1 403 9 P33 PEG . 
P 5 PEG B 1 404 10 PEG PEG . 
Q 2 P33 B 1 405 14 P33 PEG . 
R 2 P33 B 1 406 17 P33 PEG . 
S 2 P33 B 1 407 18 P33 PEG . 
T 2 P33 B 1 408 20 P33 PEG . 
U 3 VC5 B 1 409 2 VC5 VC5 . 
V 6 HOH A 1 501 78 HOH HOH . 
V 6 HOH A 2 502 31 HOH HOH . 
V 6 HOH A 3 503 32 HOH HOH . 
V 6 HOH A 4 504 37 HOH HOH . 
V 6 HOH A 5 505 41 HOH HOH . 
V 6 HOH A 6 506 10 HOH HOH . 
V 6 HOH A 7 507 8 HOH HOH . 
V 6 HOH A 8 508 65 HOH HOH . 
V 6 HOH A 9 509 74 HOH HOH . 
V 6 HOH A 10 510 73 HOH HOH . 
V 6 HOH A 11 511 36 HOH HOH . 
V 6 HOH A 12 512 76 HOH HOH . 
V 6 HOH A 13 513 35 HOH HOH . 
V 6 HOH A 14 514 77 HOH HOH . 
V 6 HOH A 15 515 38 HOH HOH . 
V 6 HOH A 16 516 17 HOH HOH . 
W 6 HOH B 1 501 52 HOH HOH . 
W 6 HOH B 2 502 20 HOH HOH . 
W 6 HOH B 3 503 75 HOH HOH . 
W 6 HOH B 4 504 69 HOH HOH . 
W 6 HOH B 5 505 25 HOH HOH . 
W 6 HOH B 6 506 26 HOH HOH . 
W 6 HOH B 7 507 63 HOH HOH . 
W 6 HOH B 8 508 6 HOH HOH . 
W 6 HOH B 9 509 46 HOH HOH . 
W 6 HOH B 10 510 23 HOH HOH . 
W 6 HOH B 11 511 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 VC5 . A . K 3 -120.251 4.583 95.451 0.5 30.95 ? O01 VC5 409 A 1 
HETATM 2 O O01 VC5 . B . K 3 -120.447 4.684 95.234 0.5 30.87 ? O01 VC5 409 A 1 
HETATM 3 C C02 VC5 . A . K 3 -120.477 5.041 96.678 0.5 30.2 ? C02 VC5 409 A 1 
HETATM 4 C C02 VC5 . B . K 3 -120.557 5.028 96.511 0.5 30.2 ? C02 VC5 409 A 1 
HETATM 5 C C03 VC5 . A . K 3 -120.84 6.378 96.854 0.5 29.89 ? C03 VC5 409 A 1 
HETATM 6 C C03 VC5 . B . K 3 -121.019 6.309 96.847 0.5 30.06 ? C03 VC5 409 A 1 
HETATM 7 C C04 VC5 . A . K 3 -121.075 6.843 98.138 0.5 30.59 ? C04 VC5 409 A 1 
HETATM 8 C C04 VC5 . B . K 3 -121.127 6.649 98.193 0.5 30.7 ? C04 VC5 409 A 1 
HETATM 9 O O05 VC5 . A . K 3 -121.428 8.12 98.328 0.5 31.65 ? O05 VC5 409 A 1 
HETATM 10 O O05 VC5 . B . K 3 -121.568 7.865 98.542 0.5 31.42 ? O05 VC5 409 A 1 
HETATM 11 C C06 VC5 . A . K 3 -120.945 5.963 99.211 0.5 31.56 ? C06 VC5 409 A 1 
HETATM 12 C C06 VC5 . B . K 3 -120.775 5.701 99.155 0.5 31.52 ? C06 VC5 409 A 1 
HETATM 13 CL CL7 VC5 . A . K 3 -121.255 6.62 100.75 0.5 38.12 ? CL7 VC5 409 A 1 
HETATM 14 CL CL7 VC5 . B . K 3 -120.927 6.158 100.794 0.5 39.27 ? CL7 VC5 409 A 1 
HETATM 15 C C08 VC5 . A . K 3 -120.59 4.631 99.082 0.5 31.3 ? C08 VC5 409 A 1 
HETATM 16 C C08 VC5 . B . K 3 -120.33 4.436 98.851 0.5 31.35 ? C08 VC5 409 A 1 
HETATM 17 C C09 VC5 . A . K 3 -120.464 3.776 100.332 0.5 36.2 ? C09 VC5 409 A 1 
HETATM 18 C C09 VC5 . B . K 3 -119.947 3.519 99.959 0.5 36.5 ? C09 VC5 409 A 1 
HETATM 19 C C10 VC5 . A . K 3 -119.014 3.424 100.741 0.5 39.55 ? C10 VC5 409 A 1 
HETATM 20 C C10 VC5 . B . K 3 -118.452 3.698 100.423 0.5 39.73 ? C10 VC5 409 A 1 
HETATM 21 C C11 VC5 . A . K 3 -118.596 3.305 102.203 0.5 44.16 ? C11 VC5 409 A 1 
HETATM 22 C C11 VC5 . B . K 3 -117.97 2.932 101.647 0.5 44.68 ? C11 VC5 409 A 1 
HETATM 23 C C12 VC5 . A . K 3 -117.498 2.479 102.619 0.5 45.91 ? C12 VC5 409 A 1 
HETATM 24 C C12 VC5 . B . K 3 -118.428 3.213 102.947 0.5 45.37 ? C12 VC5 409 A 1 
HETATM 25 C C13 VC5 . A . K 3 -116.668 1.586 101.638 0.5 43.57 ? C13 VC5 409 A 1 
HETATM 26 C C13 VC5 . B . K 3 -119.443 4.307 103.257 0.5 44.83 ? C13 VC5 409 A 1 
HETATM 27 C C14 VC5 . A . K 3 -115.679 2.177 100.568 0.5 41.29 ? C14 VC5 409 A 1 
HETATM 28 C C14 VC5 . B . K 3 -119.47 4.715 104.686 0.5 45.83 ? C14 VC5 409 A 1 
HETATM 29 C C15 VC5 . A . K 3 -116.012 3.116 99.561 0.5 39.07 ? C15 VC5 409 A 1 
HETATM 30 C C15 VC5 . B . K 3 -120.398 4.246 105.6 0.5 44.48 ? C15 VC5 409 A 1 
HETATM 31 C C16 VC5 . A . K 3 -115.083 3.58 98.623 0.5 36.6 ? C16 VC5 409 A 1 
HETATM 32 C C16 VC5 . B . K 3 -120.368 4.618 106.927 0.5 43.65 ? C16 VC5 409 A 1 
HETATM 33 C C17 VC5 . A . K 3 -113.777 3.112 98.641 0.5 38.48 ? C17 VC5 409 A 1 
HETATM 34 C C17 VC5 . B . K 3 -119.398 5.483 107.386 0.5 51.81 ? C17 VC5 409 A 1 
HETATM 35 C C18 VC5 . A . K 3 -113.42 2.182 99.608 0.5 42.65 ? C18 VC5 409 A 1 
HETATM 36 C C18 VC5 . B . K 3 -118.473 5.954 106.491 0.5 52.6 ? C18 VC5 409 A 1 
HETATM 37 C C19 VC5 . A . K 3 -114.354 1.726 100.535 0.5 45.73 ? C19 VC5 409 A 1 
HETATM 38 C C19 VC5 . B . K 3 -118.513 5.57 105.17 0.5 48.09 ? C19 VC5 409 A 1 
HETATM 39 C C20 VC5 . A . K 3 -117.199 2.437 104 0.5 44.69 ? C20 VC5 409 A 1 
HETATM 40 C C20 VC5 . B . K 3 -117.907 2.443 104.012 0.5 44.83 ? C20 VC5 409 A 1 
HETATM 41 C C21 VC5 . A . K 3 -117.9 3.185 104.952 0.5 46.19 ? C21 VC5 409 A 1 
HETATM 42 C C21 VC5 . B . K 3 -116.972 1.431 103.83 0.5 44.23 ? C21 VC5 409 A 1 
HETATM 43 C C22 VC5 . A . K 3 -118.95 4.003 104.538 0.5 46.04 ? C22 VC5 409 A 1 
HETATM 44 C C22 VC5 . B . K 3 -116.522 1.156 102.546 0.5 45.15 ? C22 VC5 409 A 1 
HETATM 45 C C23 VC5 . A . K 3 -119.282 4.055 103.176 0.5 44.82 ? C23 VC5 409 A 1 
HETATM 46 C C23 VC5 . B . K 3 -117.019 1.903 101.476 0.5 43.51 ? C23 VC5 409 A 1 
HETATM 47 C C24 VC5 . A . K 3 -120.348 4.164 97.787 0.5 30.48 ? C24 VC5 409 A 1 
HETATM 48 C C24 VC5 . B . K 3 -120.209 4.094 97.518 0.5 30.58 ? C24 VC5 409 A 1 
HETATM 49 C C25 VC5 . A . K 3 -119.94 2.748 97.399 0.5 32.44 ? C25 VC5 409 A 1 
HETATM 50 C C25 VC5 . B . K 3 -119.716 2.744 96.997 0.5 32.71 ? C25 VC5 409 A 1 
HETATM 51 O O26 VC5 . A . K 3 -118.657 2.334 97.872 0.5 32.93 ? O26 VC5 409 A 1 
HETATM 52 O O26 VC5 . B . K 3 -118.402 2.377 97.416 0.5 32.5 ? O26 VC5 409 A 1 
HETATM 53 C C27 VC5 . A . K 3 -118.293 0.981 97.627 0.5 30.1 ? C27 VC5 409 A 1 
HETATM 54 C C27 VC5 . B . K 3 -118.24 1.043 97.893 0.5 30.09 ? C27 VC5 409 A 1 
HETATM 55 O O28 VC5 . A . K 3 -120.592 2.031 96.742 0.5 33.8 ? O28 VC5 409 A 1 
HETATM 56 O O28 VC5 . B . K 3 -120.325 2.037 96.289 0.5 34.1 ? O28 VC5 409 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           56 
#