data_6AOM
#
_model_server_result.job_id            A3oJSZhddGpruDNV2ZcAQA 
_model_server_result.datetime_utc      '2025-01-10 20:20:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6aom 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":409}' 
#
_entry.id    6AOM 
#
_exptl.entry_id    6AOM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              396.863 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl 2-[2-(2-benzylphenyl)ethyl]-3-chloro-4,6-dihydroxybenzoate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AOM 
_cell.length_a            65.454 
_cell.length_b            84.233 
_cell.length_c            94.966 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AOM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,V 1 1 
B,M,N,O,P,Q,R,S,T,U,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 K N N 
? 3 U N N 
#
_chem_comp.formula           'C23 H21 Cl O4' 
_chem_comp.formula_weight    396.863 
_chem_comp.id                VC5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl 2-[2-(2-benzylphenyl)ethyl]-3-chloro-4,6-dihydroxybenzoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C02 VC5 sing 456 n n 
C02 C03 VC5 doub 457 n y 
C02 C24 VC5 sing 458 n y 
O28 C25 VC5 doub 459 n n 
C03 C04 VC5 sing 460 n y 
C25 C24 VC5 sing 461 n n 
C25 O26 VC5 sing 462 n n 
C27 O26 VC5 sing 463 n n 
C24 C08 VC5 doub 464 n y 
C04 O05 VC5 sing 465 n n 
C04 C06 VC5 doub 466 n y 
C16 C17 VC5 doub 467 n y 
C16 C15 VC5 sing 468 n y 
C17 C18 VC5 sing 469 n y 
C08 C06 VC5 sing 470 n y 
C08 C09 VC5 sing 471 n n 
C06 CL7 VC5 sing 472 n n 
C15 C14 VC5 doub 473 n y 
C18 C19 VC5 doub 474 n y 
C09 C10 VC5 sing 475 n n 
C19 C14 VC5 sing 476 n y 
C14 C13 VC5 sing 477 n n 
C10 C11 VC5 sing 478 n n 
C13 C12 VC5 sing 479 n n 
C11 C12 VC5 doub 480 n y 
C11 C23 VC5 sing 481 n y 
C12 C20 VC5 sing 482 n y 
C23 C22 VC5 doub 483 n y 
C20 C21 VC5 doub 484 n y 
C22 C21 VC5 sing 485 n y 
O01 H1 VC5 sing 486 n n 
C03 H2 VC5 sing 487 n n 
O05 H3 VC5 sing 488 n n 
C09 H4 VC5 sing 489 n n 
C09 H5 VC5 sing 490 n n 
C10 H6 VC5 sing 491 n n 
C10 H7 VC5 sing 492 n n 
C13 H8 VC5 sing 493 n n 
C13 H9 VC5 sing 494 n n 
C15 H10 VC5 sing 495 n n 
C16 H11 VC5 sing 496 n n 
C17 H12 VC5 sing 497 n n 
C18 H13 VC5 sing 498 n n 
C19 H14 VC5 sing 499 n n 
C20 H15 VC5 sing 500 n n 
C21 H16 VC5 sing 501 n n 
C22 H17 VC5 sing 502 n n 
C23 H18 VC5 sing 503 n n 
C27 H19 VC5 sing 504 n n 
C27 H20 VC5 sing 505 n n 
C27 H21 VC5 sing 506 n n 
#
_atom_sites.entry_id                     6AOM 
_atom_sites.fract_transf_matrix[1][1]    0.015278 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011872 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01053 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 P33 A 1 401 4 P33 PEG . 
D 2 P33 A 1 402 5 P33 PEG . 
E 2 P33 A 1 403 6 P33 PEG . 
F 2 P33 A 1 404 7 P33 PEG . 
G 2 P33 A 1 405 12 P33 PEG . 
H 2 P33 A 1 406 13 P33 PEG . 
I 2 P33 A 1 407 21 P33 PEG . 
J 2 P33 A 1 408 22 P33 PEG . 
K 3 VC5 A 1 409 1 VC5 VC5 . 
L 4 GOL A 1 410 1 GOL GOL . 
M 2 P33 B 1 401 3 P33 PEG . 
N 2 P33 B 1 402 8 P33 PEG . 
O 2 P33 B 1 403 9 P33 PEG . 
P 5 PEG B 1 404 10 PEG PEG . 
Q 2 P33 B 1 405 14 P33 PEG . 
R 2 P33 B 1 406 17 P33 PEG . 
S 2 P33 B 1 407 18 P33 PEG . 
T 2 P33 B 1 408 20 P33 PEG . 
U 3 VC5 B 1 409 2 VC5 VC5 . 
V 6 HOH A 1 501 78 HOH HOH . 
V 6 HOH A 2 502 31 HOH HOH . 
V 6 HOH A 3 503 32 HOH HOH . 
V 6 HOH A 4 504 37 HOH HOH . 
V 6 HOH A 5 505 41 HOH HOH . 
V 6 HOH A 6 506 10 HOH HOH . 
V 6 HOH A 7 507 8 HOH HOH . 
V 6 HOH A 8 508 65 HOH HOH . 
V 6 HOH A 9 509 74 HOH HOH . 
V 6 HOH A 10 510 73 HOH HOH . 
V 6 HOH A 11 511 36 HOH HOH . 
V 6 HOH A 12 512 76 HOH HOH . 
V 6 HOH A 13 513 35 HOH HOH . 
V 6 HOH A 14 514 77 HOH HOH . 
V 6 HOH A 15 515 38 HOH HOH . 
V 6 HOH A 16 516 17 HOH HOH . 
W 6 HOH B 1 501 52 HOH HOH . 
W 6 HOH B 2 502 20 HOH HOH . 
W 6 HOH B 3 503 75 HOH HOH . 
W 6 HOH B 4 504 69 HOH HOH . 
W 6 HOH B 5 505 25 HOH HOH . 
W 6 HOH B 6 506 26 HOH HOH . 
W 6 HOH B 7 507 63 HOH HOH . 
W 6 HOH B 8 508 6 HOH HOH . 
W 6 HOH B 9 509 46 HOH HOH . 
W 6 HOH B 10 510 23 HOH HOH . 
W 6 HOH B 11 511 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 VC5 . A . U 3 -120.249 46.228 98.518 0.5 32.03 ? O01 VC5 409 B 1 
HETATM 2 O O01 VC5 . B . U 3 -120.081 46.397 98.463 0.5 31.92 ? O01 VC5 409 B 1 
HETATM 3 C C02 VC5 . A . U 3 -120.43 46.711 99.752 0.5 31.98 ? C02 VC5 409 B 1 
HETATM 4 C C02 VC5 . B . U 3 -120.361 46.784 99.708 0.5 31.96 ? C02 VC5 409 B 1 
HETATM 5 C C03 VC5 . A . U 3 -120.946 48.001 99.924 0.5 33.35 ? C03 VC5 409 B 1 
HETATM 6 C C03 VC5 . B . U 3 -120.883 48.062 99.937 0.5 33.75 ? C03 VC5 409 B 1 
HETATM 7 C C04 VC5 . A . U 3 -121.131 48.497 101.214 0.5 35.44 ? C04 VC5 409 B 1 
HETATM 8 C C04 VC5 . B . U 3 -121.174 48.458 101.24 0.5 35.81 ? C04 VC5 409 B 1 
HETATM 9 O O05 VC5 . A . U 3 -121.633 49.755 101.385 0.5 34.44 ? O05 VC5 409 B 1 
HETATM 10 O O05 VC5 . B . U 3 -121.682 49.705 101.465 0.5 34.58 ? O05 VC5 409 B 1 
HETATM 11 C C06 VC5 . A . U 3 -120.793 47.669 102.305 0.5 34.18 ? C06 VC5 409 B 1 
HETATM 12 C C06 VC5 . B . U 3 -120.937 47.546 102.29 0.5 34.1 ? C06 VC5 409 B 1 
HETATM 13 CL CL7 VC5 . A . U 3 -121.048 48.308 103.875 0.5 41.24 ? CL7 VC5 409 B 1 
HETATM 14 CL CL7 VC5 . B . U 3 -121.336 48.092 103.877 0.5 40.36 ? CL7 VC5 409 B 1 
HETATM 15 C C08 VC5 . A . U 3 -120.291 46.384 102.168 0.5 34.43 ? C08 VC5 409 B 1 
HETATM 16 C C08 VC5 . B . U 3 -120.419 46.262 102.087 0.5 34.46 ? C08 VC5 409 B 1 
HETATM 17 C C09 VC5 . A . U 3 -119.94 45.595 103.425 0.5 37.72 ? C09 VC5 409 B 1 
HETATM 18 C C09 VC5 . B . U 3 -120.183 45.335 103.277 0.5 37.55 ? C09 VC5 409 B 1 
HETATM 19 C C10 VC5 . A . U 3 -118.556 46.017 104.072 0.5 38.79 ? C10 VC5 409 B 1 
HETATM 20 C C10 VC5 . B . U 3 -119.12 45.808 104.32 0.5 38.63 ? C10 VC5 409 B 1 
HETATM 21 C C11 VC5 . A . U 3 -118.146 45.468 105.445 0.5 43.12 ? C11 VC5 409 B 1 
HETATM 22 C C11 VC5 . B . U 3 -118.048 44.83 104.802 0.5 42.91 ? C11 VC5 409 B 1 
HETATM 23 C C12 VC5 . A . U 3 -117.329 44.311 105.588 0.5 44.9 ? C12 VC5 409 B 1 
HETATM 24 C C12 VC5 . B . U 3 -117.889 44.42 106.174 0.5 46.2 ? C12 VC5 409 B 1 
HETATM 25 C C13 VC5 . A . U 3 -116.815 43.534 104.376 0.5 44.58 ? C13 VC5 409 B 1 
HETATM 26 C C13 VC5 . B . U 3 -118.807 44.852 107.336 0.5 46.82 ? C13 VC5 409 B 1 
HETATM 27 C C14 VC5 . A . U 3 -115.538 44.076 103.686 0.5 46.37 ? C14 VC5 409 B 1 
HETATM 28 C C14 VC5 . B . U 3 -118.919 46.301 107.806 0.5 43.88 ? C14 VC5 409 B 1 
HETATM 29 C C15 VC5 . A . U 3 -115.389 44.184 102.293 0.5 39.89 ? C15 VC5 409 B 1 
HETATM 30 C C15 VC5 . B . U 3 -118.605 47.435 107.048 0.5 45.37 ? C15 VC5 409 B 1 
HETATM 31 C C16 VC5 . A . U 3 -114.22 44.676 101.727 0.5 41.8 ? C16 VC5 409 B 1 
HETATM 32 C C16 VC5 . B . U 3 -118.753 48.715 107.554 0.5 44.43 ? C16 VC5 409 B 1 
HETATM 33 C C17 VC5 . A . U 3 -113.152 45.086 102.527 0.5 47.77 ? C17 VC5 409 B 1 
HETATM 34 C C17 VC5 . B . U 3 -119.229 48.898 108.833 0.5 45.45 ? C17 VC5 409 B 1 
HETATM 35 C C18 VC5 . A . U 3 -113.274 44.992 103.901 0.5 45.74 ? C18 VC5 409 B 1 
HETATM 36 C C18 VC5 . B . U 3 -119.543 47.802 109.602 0.5 43.84 ? C18 VC5 409 B 1 
HETATM 37 C C19 VC5 . A . U 3 -114.443 44.496 104.458 0.5 45.21 ? C19 VC5 409 B 1 
HETATM 38 C C19 VC5 . B . U 3 -119.393 46.536 109.09 0.5 43.68 ? C19 VC5 409 B 1 
HETATM 39 C C20 VC5 . A . U 3 -116.994 43.887 106.899 0.5 43.73 ? C20 VC5 409 B 1 
HETATM 40 C C20 VC5 . B . U 3 -116.861 43.511 106.476 0.5 43.02 ? C20 VC5 409 B 1 
HETATM 41 C C21 VC5 . A . U 3 -117.432 44.561 108.048 0.5 45.19 ? C21 VC5 409 B 1 
HETATM 42 C C21 VC5 . B . U 3 -115.982 43.031 105.519 0.5 46.84 ? C21 VC5 409 B 1 
HETATM 43 C C22 VC5 . A . U 3 -118.228 45.7 107.904 0.5 44.77 ? C22 VC5 409 B 1 
HETATM 44 C C22 VC5 . B . U 3 -116.122 43.444 104.193 0.5 46.87 ? C22 VC5 409 B 1 
HETATM 45 C C23 VC5 . A . U 3 -118.572 46.141 106.613 0.5 43.66 ? C23 VC5 409 B 1 
HETATM 46 C C23 VC5 . B . U 3 -117.14 44.334 103.854 0.5 43.42 ? C23 VC5 409 B 1 
HETATM 47 C C24 VC5 . A . U 3 -120.092 45.91 100.865 0.5 33.4 ? C24 VC5 409 B 1 
HETATM 48 C C24 VC5 . B . U 3 -120.125 45.894 100.772 0.5 33.52 ? C24 VC5 409 B 1 
HETATM 49 C C25 VC5 . A . U 3 -119.579 44.531 100.473 0.5 36.01 ? C25 VC5 409 B 1 
HETATM 50 C C25 VC5 . B . U 3 -119.584 44.547 100.317 0.5 37.31 ? C25 VC5 409 B 1 
HETATM 51 O O26 VC5 . A . U 3 -118.401 44.095 101.1 0.5 37.94 ? O26 VC5 409 B 1 
HETATM 52 O O26 VC5 . B . U 3 -118.414 44.102 100.959 0.5 37.9 ? O26 VC5 409 B 1 
HETATM 53 C C27 VC5 . A . U 3 -118.316 42.668 101.204 0.5 35.82 ? C27 VC5 409 B 1 
HETATM 54 C C27 VC5 . B . U 3 -118.339 42.677 101.09 0.5 35.78 ? C27 VC5 409 B 1 
HETATM 55 O O28 VC5 . A . U 3 -120.123 43.827 99.704 0.5 37.58 ? O28 VC5 409 B 1 
HETATM 56 O O28 VC5 . B . U 3 -120.086 43.882 99.487 0.5 37.55 ? O28 VC5 409 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           56 
#