data_6APT # _model_server_result.job_id IraDv1wGEy1AGUU_fyUO6w _model_server_result.datetime_utc '2024-12-24 18:05:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6apt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6APT # _exptl.entry_id 6APT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6APT _cell.length_a 44.676 _cell.length_b 94.401 _cell.length_c 110.016 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6APT _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1,2 B,E,F,H 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 94.401 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 287 n n C1 C2 PEG sing 288 n n C1 H11 PEG sing 289 n n C1 H12 PEG sing 290 n n O1 HO1 PEG sing 291 n n C2 O2 PEG sing 292 n n C2 H21 PEG sing 293 n n C2 H22 PEG sing 294 n n O2 C3 PEG sing 295 n n C3 C4 PEG sing 296 n n C3 H31 PEG sing 297 n n C3 H32 PEG sing 298 n n C4 O4 PEG sing 299 n n C4 H41 PEG sing 300 n n C4 H42 PEG sing 301 n n O4 HO4 PEG sing 302 n n # _atom_sites.entry_id 6APT _atom_sites.fract_transf_matrix[1][1] 0.022383 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00909 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 45T A 1 301 2 45T 365 . D 3 PEG A 1 302 2 PEG PEG . E 2 45T B 1 301 1 45T 365 . F 3 PEG B 1 302 3 PEG PEG . G 4 HOH A 1 401 83 HOH HOH . G 4 HOH A 2 402 44 HOH HOH . G 4 HOH A 3 403 265 HOH HOH . G 4 HOH A 4 404 226 HOH HOH . G 4 HOH A 5 405 22 HOH HOH . G 4 HOH A 6 406 270 HOH HOH . G 4 HOH A 7 407 150 HOH HOH . G 4 HOH A 8 408 69 HOH HOH . G 4 HOH A 9 409 81 HOH HOH . G 4 HOH A 10 410 113 HOH HOH . G 4 HOH A 11 411 45 HOH HOH . G 4 HOH A 12 412 114 HOH HOH . G 4 HOH A 13 413 95 HOH HOH . G 4 HOH A 14 414 23 HOH HOH . G 4 HOH A 15 415 239 HOH HOH . G 4 HOH A 16 416 61 HOH HOH . G 4 HOH A 17 417 147 HOH HOH . G 4 HOH A 18 418 235 HOH HOH . G 4 HOH A 19 419 26 HOH HOH . G 4 HOH A 20 420 141 HOH HOH . G 4 HOH A 21 421 34 HOH HOH . G 4 HOH A 22 422 37 HOH HOH . G 4 HOH A 23 423 137 HOH HOH . G 4 HOH A 24 424 134 HOH HOH . G 4 HOH A 25 425 19 HOH HOH . G 4 HOH A 26 426 8 HOH HOH . G 4 HOH A 27 427 3 HOH HOH . G 4 HOH A 28 428 11 HOH HOH . G 4 HOH A 29 429 124 HOH HOH . G 4 HOH A 30 430 233 HOH HOH . G 4 HOH A 31 431 166 HOH HOH . G 4 HOH A 32 432 205 HOH HOH . G 4 HOH A 33 433 256 HOH HOH . G 4 HOH A 34 434 112 HOH HOH . G 4 HOH A 35 435 97 HOH HOH . G 4 HOH A 36 436 75 HOH HOH . G 4 HOH A 37 437 56 HOH HOH . G 4 HOH A 38 438 133 HOH HOH . G 4 HOH A 39 439 4 HOH HOH . G 4 HOH A 40 440 103 HOH HOH . G 4 HOH A 41 441 1 HOH HOH . G 4 HOH A 42 442 7 HOH HOH . G 4 HOH A 43 443 96 HOH HOH . G 4 HOH A 44 444 100 HOH HOH . G 4 HOH A 45 445 146 HOH HOH . G 4 HOH A 46 446 192 HOH HOH . G 4 HOH A 47 447 10 HOH HOH . G 4 HOH A 48 448 98 HOH HOH . G 4 HOH A 49 449 240 HOH HOH . G 4 HOH A 50 450 159 HOH HOH . G 4 HOH A 51 451 99 HOH HOH . G 4 HOH A 52 452 117 HOH HOH . G 4 HOH A 53 453 179 HOH HOH . G 4 HOH A 54 454 21 HOH HOH . G 4 HOH A 55 455 131 HOH HOH . G 4 HOH A 56 456 120 HOH HOH . G 4 HOH A 57 457 63 HOH HOH . G 4 HOH A 58 458 87 HOH HOH . G 4 HOH A 59 459 17 HOH HOH . G 4 HOH A 60 460 58 HOH HOH . G 4 HOH A 61 461 54 HOH HOH . G 4 HOH A 62 462 14 HOH HOH . G 4 HOH A 63 463 70 HOH HOH . G 4 HOH A 64 464 230 HOH HOH . G 4 HOH A 65 465 88 HOH HOH . G 4 HOH A 66 466 31 HOH HOH . G 4 HOH A 67 467 160 HOH HOH . G 4 HOH A 68 468 24 HOH HOH . G 4 HOH A 69 469 6 HOH HOH . G 4 HOH A 70 470 55 HOH HOH . G 4 HOH A 71 471 272 HOH HOH . G 4 HOH A 72 472 39 HOH HOH . G 4 HOH A 73 473 116 HOH HOH . G 4 HOH A 74 474 234 HOH HOH . G 4 HOH A 75 475 208 HOH HOH . G 4 HOH A 76 476 102 HOH HOH . G 4 HOH A 77 477 43 HOH HOH . G 4 HOH A 78 478 238 HOH HOH . G 4 HOH A 79 479 128 HOH HOH . G 4 HOH A 80 480 220 HOH HOH . G 4 HOH A 81 481 264 HOH HOH . G 4 HOH A 82 482 217 HOH HOH . G 4 HOH A 83 483 30 HOH HOH . G 4 HOH A 84 484 51 HOH HOH . G 4 HOH A 85 485 42 HOH HOH . G 4 HOH A 86 486 201 HOH HOH . G 4 HOH A 87 487 111 HOH HOH . G 4 HOH A 88 488 171 HOH HOH . G 4 HOH A 89 489 155 HOH HOH . G 4 HOH A 90 490 231 HOH HOH . G 4 HOH A 91 491 72 HOH HOH . G 4 HOH A 92 492 29 HOH HOH . G 4 HOH A 93 493 105 HOH HOH . G 4 HOH A 94 494 246 HOH HOH . G 4 HOH A 95 495 268 HOH HOH . G 4 HOH A 96 496 202 HOH HOH . G 4 HOH A 97 497 172 HOH HOH . G 4 HOH A 98 498 178 HOH HOH . G 4 HOH A 99 499 243 HOH HOH . G 4 HOH A 100 500 35 HOH HOH . G 4 HOH A 101 501 62 HOH HOH . G 4 HOH A 102 502 194 HOH HOH . G 4 HOH A 103 503 215 HOH HOH . G 4 HOH A 104 504 162 HOH HOH . G 4 HOH A 105 505 145 HOH HOH . G 4 HOH A 106 506 262 HOH HOH . G 4 HOH A 107 507 157 HOH HOH . G 4 HOH A 108 508 257 HOH HOH . G 4 HOH A 109 509 196 HOH HOH . G 4 HOH A 110 510 91 HOH HOH . G 4 HOH A 111 511 210 HOH HOH . G 4 HOH A 112 512 189 HOH HOH . G 4 HOH A 113 513 108 HOH HOH . G 4 HOH A 114 514 153 HOH HOH . G 4 HOH A 115 515 190 HOH HOH . G 4 HOH A 116 516 86 HOH HOH . G 4 HOH A 117 517 49 HOH HOH . G 4 HOH A 118 518 200 HOH HOH . G 4 HOH A 119 519 119 HOH HOH . G 4 HOH A 120 520 109 HOH HOH . G 4 HOH A 121 521 138 HOH HOH . G 4 HOH A 122 522 263 HOH HOH . G 4 HOH A 123 523 236 HOH HOH . G 4 HOH A 124 524 209 HOH HOH . G 4 HOH A 125 525 244 HOH HOH . G 4 HOH A 126 526 182 HOH HOH . G 4 HOH A 127 527 228 HOH HOH . G 4 HOH A 128 528 177 HOH HOH . G 4 HOH A 129 529 148 HOH HOH . G 4 HOH A 130 530 135 HOH HOH . G 4 HOH A 131 531 207 HOH HOH . G 4 HOH A 132 532 237 HOH HOH . G 4 HOH A 133 533 163 HOH HOH . G 4 HOH A 134 534 254 HOH HOH . G 4 HOH A 135 535 195 HOH HOH . G 4 HOH A 136 536 89 HOH HOH . G 4 HOH A 137 537 187 HOH HOH . G 4 HOH A 138 538 241 HOH HOH . H 4 HOH B 1 401 170 HOH HOH . H 4 HOH B 2 402 121 HOH HOH . H 4 HOH B 3 403 214 HOH HOH . H 4 HOH B 4 404 253 HOH HOH . H 4 HOH B 5 405 32 HOH HOH . H 4 HOH B 6 406 204 HOH HOH . H 4 HOH B 7 407 40 HOH HOH . H 4 HOH B 8 408 188 HOH HOH . H 4 HOH B 9 409 33 HOH HOH . H 4 HOH B 10 410 154 HOH HOH . H 4 HOH B 11 411 48 HOH HOH . H 4 HOH B 12 412 123 HOH HOH . H 4 HOH B 13 413 164 HOH HOH . H 4 HOH B 14 414 219 HOH HOH . H 4 HOH B 15 415 52 HOH HOH . H 4 HOH B 16 416 132 HOH HOH . H 4 HOH B 17 417 46 HOH HOH . H 4 HOH B 18 418 71 HOH HOH . H 4 HOH B 19 419 206 HOH HOH . H 4 HOH B 20 420 74 HOH HOH . H 4 HOH B 21 421 158 HOH HOH . H 4 HOH B 22 422 126 HOH HOH . H 4 HOH B 23 423 41 HOH HOH . H 4 HOH B 24 424 242 HOH HOH . H 4 HOH B 25 425 13 HOH HOH . H 4 HOH B 26 426 225 HOH HOH . H 4 HOH B 27 427 152 HOH HOH . H 4 HOH B 28 428 267 HOH HOH . H 4 HOH B 29 429 78 HOH HOH . H 4 HOH B 30 430 260 HOH HOH . H 4 HOH B 31 431 85 HOH HOH . H 4 HOH B 32 432 27 HOH HOH . H 4 HOH B 33 433 197 HOH HOH . H 4 HOH B 34 434 18 HOH HOH . H 4 HOH B 35 435 227 HOH HOH . H 4 HOH B 36 436 36 HOH HOH . H 4 HOH B 37 437 2 HOH HOH . H 4 HOH B 38 438 198 HOH HOH . H 4 HOH B 39 439 218 HOH HOH . H 4 HOH B 40 440 101 HOH HOH . H 4 HOH B 41 441 92 HOH HOH . H 4 HOH B 42 442 80 HOH HOH . H 4 HOH B 43 443 104 HOH HOH . H 4 HOH B 44 444 73 HOH HOH . H 4 HOH B 45 445 65 HOH HOH . H 4 HOH B 46 446 232 HOH HOH . H 4 HOH B 47 447 139 HOH HOH . H 4 HOH B 48 448 12 HOH HOH . H 4 HOH B 49 449 68 HOH HOH . H 4 HOH B 50 450 28 HOH HOH . H 4 HOH B 51 451 9 HOH HOH . H 4 HOH B 52 452 107 HOH HOH . H 4 HOH B 53 453 59 HOH HOH . H 4 HOH B 54 454 122 HOH HOH . H 4 HOH B 55 455 82 HOH HOH . H 4 HOH B 56 456 15 HOH HOH . H 4 HOH B 57 457 216 HOH HOH . H 4 HOH B 58 458 129 HOH HOH . H 4 HOH B 59 459 110 HOH HOH . H 4 HOH B 60 460 186 HOH HOH . H 4 HOH B 61 461 64 HOH HOH . H 4 HOH B 62 462 184 HOH HOH . H 4 HOH B 63 463 50 HOH HOH . H 4 HOH B 64 464 5 HOH HOH . H 4 HOH B 65 465 173 HOH HOH . H 4 HOH B 66 466 47 HOH HOH . H 4 HOH B 67 467 20 HOH HOH . H 4 HOH B 68 468 251 HOH HOH . H 4 HOH B 69 469 185 HOH HOH . H 4 HOH B 70 470 127 HOH HOH . H 4 HOH B 71 471 25 HOH HOH . H 4 HOH B 72 472 38 HOH HOH . H 4 HOH B 73 473 140 HOH HOH . H 4 HOH B 74 474 16 HOH HOH . H 4 HOH B 75 475 167 HOH HOH . H 4 HOH B 76 476 66 HOH HOH . H 4 HOH B 77 477 76 HOH HOH . H 4 HOH B 78 478 130 HOH HOH . H 4 HOH B 79 479 93 HOH HOH . H 4 HOH B 80 480 79 HOH HOH . H 4 HOH B 81 481 261 HOH HOH . H 4 HOH B 82 482 151 HOH HOH . H 4 HOH B 83 483 245 HOH HOH . H 4 HOH B 84 484 266 HOH HOH . H 4 HOH B 85 485 90 HOH HOH . H 4 HOH B 86 486 144 HOH HOH . H 4 HOH B 87 487 118 HOH HOH . H 4 HOH B 88 488 53 HOH HOH . H 4 HOH B 89 489 125 HOH HOH . H 4 HOH B 90 490 174 HOH HOH . H 4 HOH B 91 491 223 HOH HOH . H 4 HOH B 92 492 156 HOH HOH . H 4 HOH B 93 493 57 HOH HOH . H 4 HOH B 94 494 255 HOH HOH . H 4 HOH B 95 495 250 HOH HOH . H 4 HOH B 96 496 175 HOH HOH . H 4 HOH B 97 497 67 HOH HOH . H 4 HOH B 98 498 191 HOH HOH . H 4 HOH B 99 499 115 HOH HOH . H 4 HOH B 100 500 229 HOH HOH . H 4 HOH B 101 501 259 HOH HOH . H 4 HOH B 102 502 106 HOH HOH . H 4 HOH B 103 503 143 HOH HOH . H 4 HOH B 104 504 176 HOH HOH . H 4 HOH B 105 505 136 HOH HOH . H 4 HOH B 106 506 247 HOH HOH . H 4 HOH B 107 507 77 HOH HOH . H 4 HOH B 108 508 203 HOH HOH . H 4 HOH B 109 509 211 HOH HOH . H 4 HOH B 110 510 213 HOH HOH . H 4 HOH B 111 511 249 HOH HOH . H 4 HOH B 112 512 248 HOH HOH . H 4 HOH B 113 513 222 HOH HOH . H 4 HOH B 114 514 161 HOH HOH . H 4 HOH B 115 515 168 HOH HOH . H 4 HOH B 116 516 149 HOH HOH . H 4 HOH B 117 517 221 HOH HOH . H 4 HOH B 118 518 224 HOH HOH . H 4 HOH B 119 519 271 HOH HOH . H 4 HOH B 120 520 252 HOH HOH . H 4 HOH B 121 522 269 HOH HOH . H 4 HOH B 122 523 180 HOH HOH . H 4 HOH B 123 524 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 10.287 2.168 -3.68 1 33.37 ? C1 PEG 302 A 1 HETATM 2 O O1 PEG . . . D 3 9.896 1.595 -4.885 1 31.56 ? O1 PEG 302 A 1 HETATM 3 C C2 PEG . . . D 3 11.533 1.473 -3.14 1 34.19 ? C2 PEG 302 A 1 HETATM 4 O O2 PEG . . . D 3 11.398 0.082 -3.031 1 34.36 ? O2 PEG 302 A 1 HETATM 5 C C3 PEG . . . D 3 10.274 -0.4 -2.371 1 37.66 ? C3 PEG 302 A 1 HETATM 6 C C4 PEG . . . D 3 10.815 -1.481 -1.441 1 37.07 ? C4 PEG 302 A 1 HETATM 7 O O4 PEG . . . D 3 11.546 -0.757 -0.488 1 37.67 ? O4 PEG 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #