data_6AQB # _model_server_result.job_id g_tvf55hsOmn6Gk3JnOfqQ _model_server_result.datetime_utc '2024-12-22 06:28:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aqb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 6AQB # _exptl.entry_id 6AQB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.88 _cell.angle_gamma 90 _cell.entry_id 6AQB _cell.length_a 80.51 _cell.length_b 45.74 _cell.length_c 49.66 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AQB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -25.487583 0 42.620403 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6AQB _atom_sites.fract_transf_matrix[1][1] 0.012421 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007427 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023462 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 201 3 EDO EDO . D 3 PO4 A 1 202 1 PO4 PO4 . E 2 EDO B 1 201 1 EDO EDO . F 2 EDO B 1 202 2 EDO EDO . G 2 EDO B 1 203 4 EDO EDO . H 4 HOH A 1 301 99 HOH HOH . H 4 HOH A 2 302 89 HOH HOH . H 4 HOH A 3 303 80 HOH HOH . H 4 HOH A 4 304 95 HOH HOH . H 4 HOH A 5 305 19 HOH HOH . H 4 HOH A 6 306 14 HOH HOH . H 4 HOH A 7 307 26 HOH HOH . H 4 HOH A 8 308 45 HOH HOH . H 4 HOH A 9 309 37 HOH HOH . H 4 HOH A 10 310 84 HOH HOH . H 4 HOH A 11 311 13 HOH HOH . H 4 HOH A 12 312 23 HOH HOH . H 4 HOH A 13 313 46 HOH HOH . H 4 HOH A 14 314 73 HOH HOH . H 4 HOH A 15 315 29 HOH HOH . H 4 HOH A 16 316 85 HOH HOH . H 4 HOH A 17 317 31 HOH HOH . H 4 HOH A 18 318 25 HOH HOH . H 4 HOH A 19 319 65 HOH HOH . H 4 HOH A 20 320 33 HOH HOH . H 4 HOH A 21 321 50 HOH HOH . H 4 HOH A 22 322 94 HOH HOH . H 4 HOH A 23 323 30 HOH HOH . H 4 HOH A 24 324 3 HOH HOH . H 4 HOH A 25 325 12 HOH HOH . H 4 HOH A 26 326 34 HOH HOH . H 4 HOH A 27 327 10 HOH HOH . H 4 HOH A 28 328 36 HOH HOH . H 4 HOH A 29 329 2 HOH HOH . H 4 HOH A 30 330 47 HOH HOH . H 4 HOH A 31 331 21 HOH HOH . H 4 HOH A 32 332 43 HOH HOH . H 4 HOH A 33 333 56 HOH HOH . H 4 HOH A 34 334 1 HOH HOH . H 4 HOH A 35 335 90 HOH HOH . H 4 HOH A 36 336 7 HOH HOH . H 4 HOH A 37 337 75 HOH HOH . H 4 HOH A 38 338 74 HOH HOH . H 4 HOH A 39 339 100 HOH HOH . H 4 HOH A 40 340 53 HOH HOH . H 4 HOH A 41 341 77 HOH HOH . H 4 HOH A 42 342 68 HOH HOH . H 4 HOH A 43 343 59 HOH HOH . H 4 HOH A 44 344 52 HOH HOH . I 4 HOH B 1 301 67 HOH HOH . I 4 HOH B 2 302 27 HOH HOH . I 4 HOH B 3 303 40 HOH HOH . I 4 HOH B 4 304 32 HOH HOH . I 4 HOH B 5 305 96 HOH HOH . I 4 HOH B 6 306 93 HOH HOH . I 4 HOH B 7 307 92 HOH HOH . I 4 HOH B 8 308 70 HOH HOH . I 4 HOH B 9 309 98 HOH HOH . I 4 HOH B 10 310 39 HOH HOH . I 4 HOH B 11 311 16 HOH HOH . I 4 HOH B 12 312 66 HOH HOH . I 4 HOH B 13 313 83 HOH HOH . I 4 HOH B 14 314 8 HOH HOH . I 4 HOH B 15 315 42 HOH HOH . I 4 HOH B 16 316 38 HOH HOH . I 4 HOH B 17 317 18 HOH HOH . I 4 HOH B 18 318 54 HOH HOH . I 4 HOH B 19 319 4 HOH HOH . I 4 HOH B 20 320 35 HOH HOH . I 4 HOH B 21 321 6 HOH HOH . I 4 HOH B 22 322 15 HOH HOH . I 4 HOH B 23 323 58 HOH HOH . I 4 HOH B 24 324 55 HOH HOH . I 4 HOH B 25 325 22 HOH HOH . I 4 HOH B 26 326 51 HOH HOH . I 4 HOH B 27 327 48 HOH HOH . I 4 HOH B 28 328 49 HOH HOH . I 4 HOH B 29 329 5 HOH HOH . I 4 HOH B 30 330 24 HOH HOH . I 4 HOH B 31 331 9 HOH HOH . I 4 HOH B 32 332 64 HOH HOH . I 4 HOH B 33 333 61 HOH HOH . I 4 HOH B 34 334 63 HOH HOH . I 4 HOH B 35 335 44 HOH HOH . I 4 HOH B 36 336 41 HOH HOH . I 4 HOH B 37 337 72 HOH HOH . I 4 HOH B 38 338 28 HOH HOH . I 4 HOH B 39 339 17 HOH HOH . I 4 HOH B 40 340 69 HOH HOH . I 4 HOH B 41 341 11 HOH HOH . I 4 HOH B 42 342 20 HOH HOH . I 4 HOH B 43 343 79 HOH HOH . I 4 HOH B 44 344 97 HOH HOH . I 4 HOH B 45 345 71 HOH HOH . I 4 HOH B 46 346 60 HOH HOH . I 4 HOH B 47 347 81 HOH HOH . I 4 HOH B 48 348 86 HOH HOH . I 4 HOH B 49 349 62 HOH HOH . I 4 HOH B 50 350 91 HOH HOH . I 4 HOH B 51 351 76 HOH HOH . I 4 HOH B 52 352 87 HOH HOH . I 4 HOH B 53 353 78 HOH HOH . I 4 HOH B 54 354 88 HOH HOH . I 4 HOH B 55 355 57 HOH HOH . I 4 HOH B 56 356 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 2 36.053 48.484 -19.804 1 51.51 ? C1 EDO 202 B 1 HETATM 2 O O1 EDO . . . F 2 34.878 48.988 -19.207 1 47.43 ? O1 EDO 202 B 1 HETATM 3 C C2 EDO . . . F 2 37.136 48.175 -18.77 1 53.84 ? C2 EDO 202 B 1 HETATM 4 O O2 EDO . . . F 2 37.224 49.139 -17.701 1 54.88 ? O2 EDO 202 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #