data_6AQO # _model_server_result.job_id ihNfLaSRrFImjqR_MK3BPA _model_server_result.datetime_utc '2024-12-25 06:16:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":302}' # _entry.id 6AQO # _exptl.entry_id 6AQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.33 _cell.angle_gamma 90 _cell.entry_id 6AQO _cell.length_a 61.321 _cell.length_b 107.841 _cell.length_c 117.693 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,G,L,M,O,S 1 1 B,F,H,N,P,T 2 1 C,D,I,J,K,Q,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 K N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 140 A ASP 102 1_555 A N CSO 141 A CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSO 141 A CSO 103 1_555 A N GLY 142 A GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C ASP 140 B ASP 102 1_555 B N CSO 141 B CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C CSO 141 B CSO 103 1_555 B N GLY 142 B GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 C C ASP 140 C ASP 102 1_555 C N CSO 141 C CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 C C CSO 141 C CSO 103 1_555 C N GLY 142 C GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 D C ASP 140 D ASP 102 1_555 D N CSO 141 D CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 D C CSO 141 D CSO 103 1_555 D N GLY 142 D GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 E C ASP 140 E ASP 102 1_555 E N CSO 141 E CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 E C CSO 141 E CSO 103 1_555 E N GLY 142 E GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 F C ASP 140 F ASP 102 1_555 F N CSO 141 F CSO 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 F C CSO 141 F CSO 103 1_555 F N GLY 142 F GLY 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 E OE2 GLU 185 E GLU 147 1_555 M MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc2 E OD1 ASP 186 E ASP 148 1_555 M MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6AQO _atom_sites.fract_transf_matrix[1][1] 0.016308 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001808 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009273 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 45T A 1 301 1 45T 365 . H 2 45T B 1 301 2 45T 365 . I 2 45T C 1 301 3 45T 365 . J 2 45T D 1 301 4 45T 365 . K 3 MG D 1 302 3 MG MG . L 2 45T E 1 301 5 45T 365 . M 3 MG E 1 302 1 MG MG . N 2 45T F 1 301 6 45T 365 . O 4 HOH A 1 401 6 HOH HOH . O 4 HOH A 2 402 3 HOH HOH . O 4 HOH A 3 403 18 HOH HOH . O 4 HOH A 4 404 19 HOH HOH . O 4 HOH A 5 405 4 HOH HOH . O 4 HOH A 6 406 14 HOH HOH . O 4 HOH A 7 407 25 HOH HOH . O 4 HOH A 8 408 41 HOH HOH . P 4 HOH B 1 401 26 HOH HOH . P 4 HOH B 2 402 45 HOH HOH . P 4 HOH B 3 403 23 HOH HOH . P 4 HOH B 4 404 17 HOH HOH . P 4 HOH B 5 405 32 HOH HOH . P 4 HOH B 6 406 33 HOH HOH . P 4 HOH B 7 407 46 HOH HOH . P 4 HOH B 8 408 29 HOH HOH . Q 4 HOH C 1 401 27 HOH HOH . Q 4 HOH C 2 402 37 HOH HOH . Q 4 HOH C 3 403 38 HOH HOH . Q 4 HOH C 4 404 21 HOH HOH . Q 4 HOH C 5 405 52 HOH HOH . Q 4 HOH C 6 406 9 HOH HOH . Q 4 HOH C 7 407 31 HOH HOH . R 4 HOH D 1 401 13 HOH HOH . R 4 HOH D 2 402 8 HOH HOH . R 4 HOH D 3 403 53 HOH HOH . R 4 HOH D 4 404 12 HOH HOH . R 4 HOH D 5 405 20 HOH HOH . R 4 HOH D 6 406 51 HOH HOH . R 4 HOH D 7 407 39 HOH HOH . S 4 HOH E 1 401 47 HOH HOH . S 4 HOH E 2 402 5 HOH HOH . S 4 HOH E 3 403 50 HOH HOH . S 4 HOH E 4 404 28 HOH HOH . S 4 HOH E 5 405 42 HOH HOH . S 4 HOH E 6 406 22 HOH HOH . S 4 HOH E 7 407 16 HOH HOH . S 4 HOH E 8 408 24 HOH HOH . S 4 HOH E 9 409 34 HOH HOH . S 4 HOH E 10 410 15 HOH HOH . T 4 HOH F 1 401 7 HOH HOH . T 4 HOH F 2 402 44 HOH HOH . T 4 HOH F 3 403 10 HOH HOH . T 4 HOH F 4 404 48 HOH HOH . T 4 HOH F 5 405 49 HOH HOH . T 4 HOH F 6 406 30 HOH HOH . T 4 HOH F 7 407 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 3 _atom_site.Cartn_x 3.613 _atom_site.Cartn_y -3.378 _atom_site.Cartn_z -27.397 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 85.43 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 302 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 122 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #