data_6AS9
#
_model_server_result.job_id            lst-SSjuCRAYpKSJHwNANA 
_model_server_result.datetime_utc      '2024-12-26 19:21:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6as9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    6AS9 
#
_exptl.entry_id    6AS9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AS9 
_cell.length_a            51.1 
_cell.length_b            54.52 
_cell.length_c            85.47 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AS9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 51.1 0 0 
3 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -51.1 0 0 
4 'crystal symmetry operation' 4_555 x+1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 25.55 27.26 0 
5 'crystal symmetry operation' 4_455 x-1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 -25.55 27.26 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 64 A PHE 64 1_555 A N1 PIA 65 A PIA 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? 
covale ? covale2 A C3 PIA 65 A PIA 66 1_555 A N LEU 66 A LEU 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6AS9 
_atom_sites.fract_transf_matrix[1][1]    0.019569 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0117 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 301 301 ACT ACT . 
C 2 ACT A 1 302 302 ACT ACT . 
D 3 MPD A 1 303 303 MPD MPD . 
E 3 MPD A 1 304 304 MPD MPD . 
F 4 HOH A 1 401 387 HOH HOH . 
F 4 HOH A 2 402 351 HOH HOH . 
F 4 HOH A 3 403 477 HOH HOH . 
F 4 HOH A 4 404 402 HOH HOH . 
F 4 HOH A 5 405 371 HOH HOH . 
F 4 HOH A 6 406 516 HOH HOH . 
F 4 HOH A 7 407 409 HOH HOH . 
F 4 HOH A 8 408 336 HOH HOH . 
F 4 HOH A 9 409 417 HOH HOH . 
F 4 HOH A 10 410 401 HOH HOH . 
F 4 HOH A 11 411 347 HOH HOH . 
F 4 HOH A 12 412 424 HOH HOH . 
F 4 HOH A 13 413 318 HOH HOH . 
F 4 HOH A 14 414 479 HOH HOH . 
F 4 HOH A 15 415 508 HOH HOH . 
F 4 HOH A 16 416 501 HOH HOH . 
F 4 HOH A 17 417 456 HOH HOH . 
F 4 HOH A 18 418 465 HOH HOH . 
F 4 HOH A 19 419 349 HOH HOH . 
F 4 HOH A 20 420 385 HOH HOH . 
F 4 HOH A 21 421 418 HOH HOH . 
F 4 HOH A 22 422 454 HOH HOH . 
F 4 HOH A 23 423 455 HOH HOH . 
F 4 HOH A 24 424 497 HOH HOH . 
F 4 HOH A 25 425 404 HOH HOH . 
F 4 HOH A 26 426 391 HOH HOH . 
F 4 HOH A 27 427 310 HOH HOH . 
F 4 HOH A 28 428 427 HOH HOH . 
F 4 HOH A 29 429 432 HOH HOH . 
F 4 HOH A 30 430 431 HOH HOH . 
F 4 HOH A 31 431 331 HOH HOH . 
F 4 HOH A 32 432 364 HOH HOH . 
F 4 HOH A 33 433 460 HOH HOH . 
F 4 HOH A 34 434 415 HOH HOH . 
F 4 HOH A 35 435 348 HOH HOH . 
F 4 HOH A 36 436 335 HOH HOH . 
F 4 HOH A 37 437 471 HOH HOH . 
F 4 HOH A 38 438 416 HOH HOH . 
F 4 HOH A 39 439 342 HOH HOH . 
F 4 HOH A 40 440 311 HOH HOH . 
F 4 HOH A 41 441 332 HOH HOH . 
F 4 HOH A 42 442 467 HOH HOH . 
F 4 HOH A 43 443 308 HOH HOH . 
F 4 HOH A 44 444 330 HOH HOH . 
F 4 HOH A 45 445 380 HOH HOH . 
F 4 HOH A 46 446 502 HOH HOH . 
F 4 HOH A 47 447 458 HOH HOH . 
F 4 HOH A 48 448 514 HOH HOH . 
F 4 HOH A 49 449 406 HOH HOH . 
F 4 HOH A 50 450 327 HOH HOH . 
F 4 HOH A 51 451 513 HOH HOH . 
F 4 HOH A 52 452 426 HOH HOH . 
F 4 HOH A 53 453 423 HOH HOH . 
F 4 HOH A 54 454 306 HOH HOH . 
F 4 HOH A 55 455 494 HOH HOH . 
F 4 HOH A 56 456 320 HOH HOH . 
F 4 HOH A 57 457 457 HOH HOH . 
F 4 HOH A 58 458 442 HOH HOH . 
F 4 HOH A 59 459 486 HOH HOH . 
F 4 HOH A 60 460 307 HOH HOH . 
F 4 HOH A 61 461 395 HOH HOH . 
F 4 HOH A 62 462 383 HOH HOH . 
F 4 HOH A 63 463 448 HOH HOH . 
F 4 HOH A 64 464 344 HOH HOH . 
F 4 HOH A 65 465 428 HOH HOH . 
F 4 HOH A 66 466 425 HOH HOH . 
F 4 HOH A 67 467 334 HOH HOH . 
F 4 HOH A 68 468 359 HOH HOH . 
F 4 HOH A 69 469 316 HOH HOH . 
F 4 HOH A 70 470 337 HOH HOH . 
F 4 HOH A 71 471 314 HOH HOH . 
F 4 HOH A 72 472 407 HOH HOH . 
F 4 HOH A 73 473 452 HOH HOH . 
F 4 HOH A 74 474 354 HOH HOH . 
F 4 HOH A 75 475 317 HOH HOH . 
F 4 HOH A 76 476 504 HOH HOH . 
F 4 HOH A 77 477 315 HOH HOH . 
F 4 HOH A 78 478 341 HOH HOH . 
F 4 HOH A 79 479 498 HOH HOH . 
F 4 HOH A 80 480 444 HOH HOH . 
F 4 HOH A 81 481 481 HOH HOH . 
F 4 HOH A 82 482 345 HOH HOH . 
F 4 HOH A 83 483 507 HOH HOH . 
F 4 HOH A 84 484 338 HOH HOH . 
F 4 HOH A 85 485 324 HOH HOH . 
F 4 HOH A 86 486 346 HOH HOH . 
F 4 HOH A 87 487 353 HOH HOH . 
F 4 HOH A 88 488 362 HOH HOH . 
F 4 HOH A 89 489 329 HOH HOH . 
F 4 HOH A 90 490 321 HOH HOH . 
F 4 HOH A 91 491 340 HOH HOH . 
F 4 HOH A 92 492 413 HOH HOH . 
F 4 HOH A 93 493 382 HOH HOH . 
F 4 HOH A 94 494 384 HOH HOH . 
F 4 HOH A 95 495 414 HOH HOH . 
F 4 HOH A 96 496 488 HOH HOH . 
F 4 HOH A 97 497 447 HOH HOH . 
F 4 HOH A 98 498 309 HOH HOH . 
F 4 HOH A 99 499 487 HOH HOH . 
F 4 HOH A 100 500 328 HOH HOH . 
F 4 HOH A 101 501 363 HOH HOH . 
F 4 HOH A 102 502 375 HOH HOH . 
F 4 HOH A 103 503 476 HOH HOH . 
F 4 HOH A 104 504 389 HOH HOH . 
F 4 HOH A 105 505 357 HOH HOH . 
F 4 HOH A 106 506 453 HOH HOH . 
F 4 HOH A 107 507 378 HOH HOH . 
F 4 HOH A 108 508 450 HOH HOH . 
F 4 HOH A 109 509 333 HOH HOH . 
F 4 HOH A 110 510 400 HOH HOH . 
F 4 HOH A 111 511 312 HOH HOH . 
F 4 HOH A 112 512 492 HOH HOH . 
F 4 HOH A 113 513 408 HOH HOH . 
F 4 HOH A 114 514 392 HOH HOH . 
F 4 HOH A 115 515 325 HOH HOH . 
F 4 HOH A 116 516 429 HOH HOH . 
F 4 HOH A 117 517 319 HOH HOH . 
F 4 HOH A 118 518 443 HOH HOH . 
F 4 HOH A 119 519 440 HOH HOH . 
F 4 HOH A 120 520 511 HOH HOH . 
F 4 HOH A 121 521 403 HOH HOH . 
F 4 HOH A 122 522 483 HOH HOH . 
F 4 HOH A 123 523 323 HOH HOH . 
F 4 HOH A 124 524 326 HOH HOH . 
F 4 HOH A 125 525 441 HOH HOH . 
F 4 HOH A 126 526 369 HOH HOH . 
F 4 HOH A 127 527 394 HOH HOH . 
F 4 HOH A 128 528 393 HOH HOH . 
F 4 HOH A 129 529 451 HOH HOH . 
F 4 HOH A 130 530 381 HOH HOH . 
F 4 HOH A 131 531 495 HOH HOH . 
F 4 HOH A 132 532 412 HOH HOH . 
F 4 HOH A 133 533 358 HOH HOH . 
F 4 HOH A 134 534 399 HOH HOH . 
F 4 HOH A 135 535 377 HOH HOH . 
F 4 HOH A 136 536 491 HOH HOH . 
F 4 HOH A 137 537 489 HOH HOH . 
F 4 HOH A 138 538 350 HOH HOH . 
F 4 HOH A 139 539 361 HOH HOH . 
F 4 HOH A 140 540 474 HOH HOH . 
F 4 HOH A 141 541 436 HOH HOH . 
F 4 HOH A 142 542 499 HOH HOH . 
F 4 HOH A 143 543 366 HOH HOH . 
F 4 HOH A 144 544 493 HOH HOH . 
F 4 HOH A 145 545 367 HOH HOH . 
F 4 HOH A 146 546 422 HOH HOH . 
F 4 HOH A 147 547 356 HOH HOH . 
F 4 HOH A 148 548 509 HOH HOH . 
F 4 HOH A 149 549 379 HOH HOH . 
F 4 HOH A 150 550 360 HOH HOH . 
F 4 HOH A 151 551 397 HOH HOH . 
F 4 HOH A 152 552 396 HOH HOH . 
F 4 HOH A 153 553 506 HOH HOH . 
F 4 HOH A 154 554 374 HOH HOH . 
F 4 HOH A 155 555 439 HOH HOH . 
F 4 HOH A 156 556 437 HOH HOH . 
F 4 HOH A 157 557 480 HOH HOH . 
F 4 HOH A 158 558 478 HOH HOH . 
F 4 HOH A 159 559 470 HOH HOH . 
F 4 HOH A 160 560 386 HOH HOH . 
F 4 HOH A 161 561 430 HOH HOH . 
F 4 HOH A 162 562 459 HOH HOH . 
F 4 HOH A 163 563 365 HOH HOH . 
F 4 HOH A 164 564 372 HOH HOH . 
F 4 HOH A 165 565 373 HOH HOH . 
F 4 HOH A 166 566 468 HOH HOH . 
F 4 HOH A 167 567 370 HOH HOH . 
F 4 HOH A 168 568 461 HOH HOH . 
F 4 HOH A 169 569 390 HOH HOH . 
F 4 HOH A 170 570 322 HOH HOH . 
F 4 HOH A 171 571 421 HOH HOH . 
F 4 HOH A 172 572 368 HOH HOH . 
F 4 HOH A 173 573 352 HOH HOH . 
F 4 HOH A 174 574 490 HOH HOH . 
F 4 HOH A 175 575 355 HOH HOH . 
F 4 HOH A 176 576 485 HOH HOH . 
F 4 HOH A 177 577 305 HOH HOH . 
F 4 HOH A 178 578 505 HOH HOH . 
F 4 HOH A 179 579 472 HOH HOH . 
F 4 HOH A 180 580 411 HOH HOH . 
F 4 HOH A 181 581 388 HOH HOH . 
F 4 HOH A 182 582 313 HOH HOH . 
F 4 HOH A 183 583 466 HOH HOH . 
F 4 HOH A 184 584 462 HOH HOH . 
F 4 HOH A 185 585 419 HOH HOH . 
F 4 HOH A 186 586 473 HOH HOH . 
F 4 HOH A 187 587 398 HOH HOH . 
F 4 HOH A 188 588 376 HOH HOH . 
F 4 HOH A 189 589 438 HOH HOH . 
F 4 HOH A 190 590 446 HOH HOH . 
F 4 HOH A 191 591 464 HOH HOH . 
F 4 HOH A 192 592 463 HOH HOH . 
F 4 HOH A 193 593 500 HOH HOH . 
F 4 HOH A 194 594 420 HOH HOH . 
F 4 HOH A 195 595 435 HOH HOH . 
F 4 HOH A 196 596 433 HOH HOH . 
F 4 HOH A 197 597 469 HOH HOH . 
F 4 HOH A 198 598 449 HOH HOH . 
F 4 HOH A 199 599 434 HOH HOH . 
F 4 HOH A 200 600 496 HOH HOH . 
F 4 HOH A 201 601 515 HOH HOH . 
F 4 HOH A 202 602 510 HOH HOH . 
F 4 HOH A 203 603 445 HOH HOH . 
F 4 HOH A 204 604 410 HOH HOH . 
F 4 HOH A 205 605 339 HOH HOH . 
F 4 HOH A 206 606 405 HOH HOH . 
F 4 HOH A 207 607 512 HOH HOH . 
F 4 HOH A 208 608 343 HOH HOH . 
F 4 HOH A 209 609 482 HOH HOH . 
F 4 HOH A 210 610 475 HOH HOH . 
F 4 HOH A 211 611 484 HOH HOH . 
F 4 HOH A 212 612 503 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . D 3 11.767 27.206 -12.924 1 29.89 ? C1 MPD 303 A 1 
HETATM 2 C C2 MPD . . . D 3 11.156 27.901 -14.146 1 30.87 ? C2 MPD 303 A 1 
HETATM 3 O O2 MPD . . . D 3 11.185 29.321 -13.914 1 25.9 ? O2 MPD 303 A 1 
HETATM 4 C CM MPD . . . D 3 9.681 27.551 -14.281 1 31.09 ? CM MPD 303 A 1 
HETATM 5 C C3 MPD . . . D 3 11.881 27.467 -15.474 1 32.28 ? C3 MPD 303 A 1 
HETATM 6 C C4 MPD . . . D 3 13.222 28.163 -15.873 1 36.18 ? C4 MPD 303 A 1 
HETATM 7 O O4 MPD . . . D 3 14.212 28.09 -14.839 1 40.65 ? O4 MPD 303 A 1 
HETATM 8 C C5 MPD . . . D 3 13.77 27.546 -17.142 1 33.78 ? C5 MPD 303 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#