data_6ASD # _model_server_result.job_id dbmCR_tlY5Ki1E21EREMVw _model_server_result.datetime_utc '2024-10-19 14:41:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6asd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":104}' # _entry.id 6ASD # _exptl.entry_id 6ASD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight ? _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN ATOM OR ION' _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 121.82 _cell.angle_gamma 90 _cell.entry_id 6ASD _cell.length_a 73.502 _cell.length_b 31.951 _cell.length_c 65.414 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ASD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 6 C CYS 591 1_555 M ZN ZN . C ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc2 C SG CYS 9 C CYS 594 1_555 M ZN ZN . C ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc3 C SG CYS 12 C CYS 597 1_555 M ZN ZN . C ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc4 C SG CYS 18 C CYS 603 1_555 N ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc5 C SG CYS 21 C CYS 606 1_555 N ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc6 C SG CYS 24 C CYS 609 1_555 N ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 C SG CYS 34 C CYS 619 1_555 N ZN ZN . C ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc8 C SG CYS 39 C CYS 624 1_555 M ZN ZN . C ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 B N3 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 B O2 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 B N4 DC 12 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 11 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 10 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 4 A DA 4 1_555 B N3 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 4 A DA 4 1_555 B O4 DT 9 B DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DC 5 A DC 5 1_555 B N1 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N4 DC 5 A DC 5 1_555 B O6 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O2 DC 5 A DC 5 1_555 B N2 DG 8 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N3 DC 6 A DC 6 1_555 B N1 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N4 DC 6 A DC 6 1_555 B O6 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O2 DC 6 A DC 6 1_555 B N2 DG 7 B DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DG 7 A DG 7 1_555 B N3 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N2 DG 7 A DG 7 1_555 B O2 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O6 DG 7 A DG 7 1_555 B N4 DC 6 B DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 8 A DG 8 1_555 B N3 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 8 A DG 8 1_555 B O2 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 8 A DG 8 1_555 B N4 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 DT 9 A DT 9 1_555 B N1 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A O4 DT 9 A DT 9 1_555 B N6 DA 4 B DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N1 DG 10 A DG 10 1_555 B N3 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N2 DG 10 A DG 10 1_555 B O2 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A O6 DG 10 A DG 10 1_555 B N4 DC 3 B DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N1 DG 11 A DG 11 1_555 B N3 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N2 DG 11 A DG 11 1_555 B O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A O6 DG 11 A DG 11 1_555 B N4 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A N3 DC 12 A DC 12 1_555 B N1 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 A N4 DC 12 A DC 12 1_555 B O6 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 A O2 DC 12 A DC 12 1_555 B N2 DG 1 B DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula ? _chem_comp.formula_weight ? _chem_comp.id UNX _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN ATOM OR ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ASD _atom_sites.fract_transf_matrix[1][1] 0.013605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008442 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 UNX A 1 101 10 UNX UNX . E 3 UNX A 1 102 23 UNX UNX . F 3 UNX A 1 103 26 UNX UNX . G 3 UNX B 1 101 2 UNX UNX . H 3 UNX B 1 102 8 UNX UNX . I 3 UNX B 1 103 11 UNX UNX . J 3 UNX B 1 104 15 UNX UNX . K 3 UNX B 1 105 16 UNX UNX . L 3 UNX B 1 106 17 UNX UNX . M 4 ZN C 1 701 1 ZN ZN . N 4 ZN C 1 702 2 ZN ZN . O 3 UNX C 1 703 3 UNX UNX . P 3 UNX C 1 704 9 UNX UNX . Q 3 UNX C 1 705 12 UNX UNX . R 3 UNX C 1 706 18 UNX UNX . S 3 UNX C 1 707 20 UNX UNX . T 3 UNX C 1 708 22 UNX UNX . U 3 UNX C 1 709 24 UNX UNX . V 3 UNX C 1 710 25 UNX UNX . W 5 HOH A 1 201 21 HOH HOH . W 5 HOH A 2 202 24 HOH HOH . W 5 HOH A 3 203 44 HOH HOH . W 5 HOH A 4 204 27 HOH HOH . W 5 HOH A 5 205 63 HOH HOH . W 5 HOH A 6 206 8 HOH HOH . W 5 HOH A 7 207 96 HOH HOH . W 5 HOH A 8 208 84 HOH HOH . W 5 HOH A 9 209 10 HOH HOH . W 5 HOH A 10 210 111 HOH HOH . W 5 HOH A 11 211 55 HOH HOH . W 5 HOH A 12 212 85 HOH HOH . W 5 HOH A 13 213 95 HOH HOH . X 5 HOH B 1 201 69 HOH HOH . X 5 HOH B 2 202 54 HOH HOH . X 5 HOH B 3 203 65 HOH HOH . X 5 HOH B 4 204 28 HOH HOH . X 5 HOH B 5 205 12 HOH HOH . X 5 HOH B 6 206 23 HOH HOH . X 5 HOH B 7 207 90 HOH HOH . X 5 HOH B 8 208 3 HOH HOH . X 5 HOH B 9 209 82 HOH HOH . X 5 HOH B 10 210 104 HOH HOH . X 5 HOH B 11 211 64 HOH HOH . X 5 HOH B 12 212 11 HOH HOH . X 5 HOH B 13 213 83 HOH HOH . X 5 HOH B 14 214 39 HOH HOH . X 5 HOH B 15 215 50 HOH HOH . X 5 HOH B 16 216 81 HOH HOH . X 5 HOH B 17 217 98 HOH HOH . X 5 HOH B 18 218 105 HOH HOH . X 5 HOH B 19 219 97 HOH HOH . X 5 HOH B 20 220 68 HOH HOH . X 5 HOH B 21 221 43 HOH HOH . Y 5 HOH C 1 801 34 HOH HOH . Y 5 HOH C 2 802 72 HOH HOH . Y 5 HOH C 3 803 109 HOH HOH . Y 5 HOH C 4 804 13 HOH HOH . Y 5 HOH C 5 805 66 HOH HOH . Y 5 HOH C 6 806 94 HOH HOH . Y 5 HOH C 7 807 87 HOH HOH . Y 5 HOH C 8 808 112 HOH HOH . Y 5 HOH C 9 809 49 HOH HOH . Y 5 HOH C 10 810 88 HOH HOH . Y 5 HOH C 11 811 40 HOH HOH . Y 5 HOH C 12 812 99 HOH HOH . Y 5 HOH C 13 813 7 HOH HOH . Y 5 HOH C 14 814 9 HOH HOH . Y 5 HOH C 15 815 6 HOH HOH . Y 5 HOH C 16 816 31 HOH HOH . Y 5 HOH C 17 817 67 HOH HOH . Y 5 HOH C 18 818 5 HOH HOH . Y 5 HOH C 19 819 74 HOH HOH . Y 5 HOH C 20 820 73 HOH HOH . Y 5 HOH C 21 821 29 HOH HOH . Y 5 HOH C 22 822 86 HOH HOH . Y 5 HOH C 23 823 89 HOH HOH . Y 5 HOH C 24 824 19 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol X _atom_site.label_atom_id UNK _atom_site.label_comp_id UNX _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -72.393 _atom_site.Cartn_y 40.918 _atom_site.Cartn_z 8.59 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 24.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id UNK _atom_site.auth_comp_id UNX _atom_site.auth_seq_id 104 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #