data_6ASQ # _model_server_result.job_id m7TuxNv9fYgDCWM8ybt8LQ _model_server_result.datetime_utc '2025-01-10 18:17:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6asq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":411}' # _entry.id 6ASQ # _exptl.entry_id 6ASQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ASQ _cell.length_a 65.431 _cell.length_b 84.717 _cell.length_c 95.759 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ASQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,Y 1 1 B,O,P,Q,R,S,T,U,V,W,X,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 L N N ? 4 M N N ? 4 V N N ? 4 W N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6ASQ _atom_sites.fract_transf_matrix[1][1] 0.015283 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010443 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PE8 A 1 401 1 PE8 PEG . D 2 PE8 A 1 402 2 PE8 PEG . E 2 PE8 A 1 403 3 PE8 PEG . F 2 PE8 A 1 404 4 PE8 PEG . G 2 PE8 A 1 405 10 PE8 PEG . H 2 PE8 A 1 406 14 PE8 PEG . I 3 PEG A 1 407 16 PEG PEG . J 3 PEG A 1 408 17 PEG PEG . K 2 PE8 A 1 409 18 PE8 PEG . L 4 GOL A 1 410 1 GOL GOL . M 4 GOL A 1 411 5 GOL GOL . N 5 VC4 A 1 412 2 VC4 VC4 . O 2 PE8 B 1 401 5 PE8 PEG . P 2 PE8 B 1 402 6 PE8 PEG . Q 2 PE8 B 1 403 11 PE8 PEG . R 2 PE8 B 1 404 12 PE8 PEG . S 2 PE8 B 1 405 13 PE8 PEG . T 2 PE8 B 1 406 15 PE8 PEG . U 3 PEG B 1 407 19 PEG PEG . V 4 GOL B 1 408 4 GOL GOL . W 4 GOL B 1 409 6 GOL GOL . X 5 VC4 B 1 410 3 VC4 VC4 . Y 6 HOH A 1 501 99 HOH HOH . Y 6 HOH A 2 502 67 HOH HOH . Y 6 HOH A 3 503 57 HOH HOH . Y 6 HOH A 4 504 21 HOH HOH . Y 6 HOH A 5 505 106 HOH HOH . Y 6 HOH A 6 506 113 HOH HOH . Y 6 HOH A 7 507 105 HOH HOH . Y 6 HOH A 8 508 125 HOH HOH . Y 6 HOH A 9 509 58 HOH HOH . Y 6 HOH A 10 510 15 HOH HOH . Y 6 HOH A 11 511 126 HOH HOH . Y 6 HOH A 12 512 135 HOH HOH . Y 6 HOH A 13 513 98 HOH HOH . Y 6 HOH A 14 514 132 HOH HOH . Y 6 HOH A 15 515 22 HOH HOH . Y 6 HOH A 16 516 49 HOH HOH . Y 6 HOH A 17 517 1 HOH HOH . Y 6 HOH A 18 518 59 HOH HOH . Y 6 HOH A 19 519 18 HOH HOH . Y 6 HOH A 20 520 19 HOH HOH . Y 6 HOH A 21 521 112 HOH HOH . Y 6 HOH A 22 522 143 HOH HOH . Y 6 HOH A 23 523 136 HOH HOH . Y 6 HOH A 24 524 70 HOH HOH . Y 6 HOH A 25 525 109 HOH HOH . Y 6 HOH A 26 526 137 HOH HOH . Y 6 HOH A 27 527 139 HOH HOH . Y 6 HOH A 28 528 62 HOH HOH . Y 6 HOH A 29 529 114 HOH HOH . Y 6 HOH A 30 530 115 HOH HOH . Y 6 HOH A 31 531 124 HOH HOH . Y 6 HOH A 32 532 24 HOH HOH . Y 6 HOH A 33 533 134 HOH HOH . Y 6 HOH A 34 534 83 HOH HOH . Y 6 HOH A 35 535 25 HOH HOH . Y 6 HOH A 36 536 133 HOH HOH . Y 6 HOH A 37 537 103 HOH HOH . Y 6 HOH A 38 538 61 HOH HOH . Y 6 HOH A 39 539 84 HOH HOH . Y 6 HOH A 40 540 138 HOH HOH . Z 6 HOH B 1 501 97 HOH HOH . Z 6 HOH B 2 502 77 HOH HOH . Z 6 HOH B 3 503 142 HOH HOH . Z 6 HOH B 4 504 122 HOH HOH . Z 6 HOH B 5 505 42 HOH HOH . Z 6 HOH B 6 506 46 HOH HOH . Z 6 HOH B 7 507 116 HOH HOH . Z 6 HOH B 8 508 140 HOH HOH . Z 6 HOH B 9 509 41 HOH HOH . Z 6 HOH B 10 510 95 HOH HOH . Z 6 HOH B 11 511 76 HOH HOH . Z 6 HOH B 12 512 30 HOH HOH . Z 6 HOH B 13 513 96 HOH HOH . Z 6 HOH B 14 514 36 HOH HOH . Z 6 HOH B 15 515 27 HOH HOH . Z 6 HOH B 16 516 78 HOH HOH . Z 6 HOH B 17 517 121 HOH HOH . Z 6 HOH B 18 518 43 HOH HOH . Z 6 HOH B 19 519 31 HOH HOH . Z 6 HOH B 20 520 34 HOH HOH . Z 6 HOH B 21 521 85 HOH HOH . Z 6 HOH B 22 522 51 HOH HOH . Z 6 HOH B 23 523 117 HOH HOH . Z 6 HOH B 24 524 87 HOH HOH . Z 6 HOH B 25 525 39 HOH HOH . Z 6 HOH B 26 526 40 HOH HOH . Z 6 HOH B 27 527 107 HOH HOH . Z 6 HOH B 28 528 141 HOH HOH . Z 6 HOH B 29 529 129 HOH HOH . Z 6 HOH B 30 530 123 HOH HOH . Z 6 HOH B 31 531 86 HOH HOH . Z 6 HOH B 32 532 120 HOH HOH . Z 6 HOH B 33 533 74 HOH HOH . Z 6 HOH B 34 534 6 HOH HOH . Z 6 HOH B 35 535 63 HOH HOH . Z 6 HOH B 36 536 32 HOH HOH . Z 6 HOH B 37 537 130 HOH HOH . Z 6 HOH B 38 538 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . M 4 -65.119 97.457 -50.655 1 75.07 ? C1 GOL 411 A 1 HETATM 2 O O1 GOL . . . M 4 -64.534 97.615 -51.908 1 75.11 ? O1 GOL 411 A 1 HETATM 3 C C2 GOL . . . M 4 -63.962 97.169 -49.699 1 73.07 ? C2 GOL 411 A 1 HETATM 4 O O2 GOL . . . M 4 -64.395 96.953 -48.394 1 74.04 ? O2 GOL 411 A 1 HETATM 5 C C3 GOL . . . M 4 -63.275 95.938 -50.299 1 72.43 ? C3 GOL 411 A 1 HETATM 6 O O3 GOL . . . M 4 -62.589 96.372 -51.425 1 75.7 ? O3 GOL 411 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #