data_6ATD # _model_server_result.job_id LlEft7_eZitJE6udawx-7A _model_server_result.datetime_utc '2024-12-21 17:10:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6atd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":602}' # _entry.id 6ATD # _exptl.entry_id 6ATD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.25 _cell.angle_gamma 90 _cell.entry_id 6ATD _cell.length_a 46.292 _cell.length_b 216.135 _cell.length_c 55.709 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ATD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G 1 1 B,D,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 369 A CYS 367 1_555 A SG CYS 461 A CYS 459 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 B SG CYS 369 B CYS 367 1_555 B SG CYS 461 B CYS 459 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.045 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 6ATD _atom_sites.fract_transf_matrix[1][1] 0.021602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002748 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018095 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 601 3 PO4 PO4 . D 2 PO4 B 1 601 2 PO4 PO4 . E 2 PO4 B 1 602 4 PO4 PO4 . F 2 PO4 B 1 603 6 PO4 PO4 . G 3 HOH A 1 701 86 HOH HOH . G 3 HOH A 2 702 2 HOH HOH . G 3 HOH A 3 703 246 HOH HOH . G 3 HOH A 4 704 189 HOH HOH . G 3 HOH A 5 705 1 HOH HOH . G 3 HOH A 6 706 7 HOH HOH . G 3 HOH A 7 707 112 HOH HOH . G 3 HOH A 8 708 216 HOH HOH . G 3 HOH A 9 709 139 HOH HOH . G 3 HOH A 10 710 143 HOH HOH . G 3 HOH A 11 711 33 HOH HOH . G 3 HOH A 12 712 207 HOH HOH . G 3 HOH A 13 713 190 HOH HOH . G 3 HOH A 14 714 166 HOH HOH . G 3 HOH A 15 715 53 HOH HOH . G 3 HOH A 16 716 41 HOH HOH . G 3 HOH A 17 717 187 HOH HOH . G 3 HOH A 18 718 137 HOH HOH . G 3 HOH A 19 719 62 HOH HOH . G 3 HOH A 20 720 60 HOH HOH . G 3 HOH A 21 721 56 HOH HOH . G 3 HOH A 22 722 61 HOH HOH . G 3 HOH A 23 723 43 HOH HOH . G 3 HOH A 24 724 106 HOH HOH . G 3 HOH A 25 725 188 HOH HOH . G 3 HOH A 26 726 42 HOH HOH . G 3 HOH A 27 727 82 HOH HOH . G 3 HOH A 28 728 64 HOH HOH . G 3 HOH A 29 729 13 HOH HOH . G 3 HOH A 30 730 180 HOH HOH . G 3 HOH A 31 731 109 HOH HOH . G 3 HOH A 32 732 122 HOH HOH . G 3 HOH A 33 733 17 HOH HOH . G 3 HOH A 34 734 15 HOH HOH . G 3 HOH A 35 735 240 HOH HOH . G 3 HOH A 36 736 83 HOH HOH . G 3 HOH A 37 737 91 HOH HOH . G 3 HOH A 38 738 21 HOH HOH . G 3 HOH A 39 739 105 HOH HOH . G 3 HOH A 40 740 138 HOH HOH . G 3 HOH A 41 741 194 HOH HOH . G 3 HOH A 42 742 129 HOH HOH . G 3 HOH A 43 743 148 HOH HOH . G 3 HOH A 44 744 28 HOH HOH . G 3 HOH A 45 745 244 HOH HOH . G 3 HOH A 46 746 152 HOH HOH . G 3 HOH A 47 747 98 HOH HOH . G 3 HOH A 48 748 165 HOH HOH . G 3 HOH A 49 749 32 HOH HOH . G 3 HOH A 50 750 59 HOH HOH . G 3 HOH A 51 751 191 HOH HOH . G 3 HOH A 52 752 57 HOH HOH . G 3 HOH A 53 753 101 HOH HOH . G 3 HOH A 54 754 35 HOH HOH . G 3 HOH A 55 755 176 HOH HOH . G 3 HOH A 56 756 230 HOH HOH . G 3 HOH A 57 757 136 HOH HOH . G 3 HOH A 58 758 173 HOH HOH . G 3 HOH A 59 759 36 HOH HOH . G 3 HOH A 60 760 142 HOH HOH . G 3 HOH A 61 761 108 HOH HOH . G 3 HOH A 62 762 65 HOH HOH . G 3 HOH A 63 763 212 HOH HOH . G 3 HOH A 64 764 130 HOH HOH . G 3 HOH A 65 765 185 HOH HOH . G 3 HOH A 66 766 131 HOH HOH . G 3 HOH A 67 767 97 HOH HOH . G 3 HOH A 68 768 211 HOH HOH . G 3 HOH A 69 769 175 HOH HOH . G 3 HOH A 70 770 241 HOH HOH . G 3 HOH A 71 771 121 HOH HOH . G 3 HOH A 72 772 67 HOH HOH . G 3 HOH A 73 773 132 HOH HOH . G 3 HOH A 74 774 227 HOH HOH . G 3 HOH A 75 775 40 HOH HOH . G 3 HOH A 76 776 182 HOH HOH . G 3 HOH A 77 777 184 HOH HOH . G 3 HOH A 78 778 169 HOH HOH . G 3 HOH A 79 779 96 HOH HOH . G 3 HOH A 80 780 103 HOH HOH . G 3 HOH A 81 781 171 HOH HOH . G 3 HOH A 82 782 93 HOH HOH . H 3 HOH B 1 701 236 HOH HOH . H 3 HOH B 2 702 239 HOH HOH . H 3 HOH B 3 703 4 HOH HOH . H 3 HOH B 4 704 100 HOH HOH . H 3 HOH B 5 705 8 HOH HOH . H 3 HOH B 6 706 245 HOH HOH . H 3 HOH B 7 707 68 HOH HOH . H 3 HOH B 8 708 85 HOH HOH . H 3 HOH B 9 709 209 HOH HOH . H 3 HOH B 10 710 11 HOH HOH . H 3 HOH B 11 711 27 HOH HOH . H 3 HOH B 12 712 22 HOH HOH . H 3 HOH B 13 713 9 HOH HOH . H 3 HOH B 14 714 150 HOH HOH . H 3 HOH B 15 715 231 HOH HOH . H 3 HOH B 16 716 200 HOH HOH . H 3 HOH B 17 717 242 HOH HOH . H 3 HOH B 18 718 14 HOH HOH . H 3 HOH B 19 719 102 HOH HOH . H 3 HOH B 20 720 154 HOH HOH . H 3 HOH B 21 721 70 HOH HOH . H 3 HOH B 22 722 84 HOH HOH . H 3 HOH B 23 723 38 HOH HOH . H 3 HOH B 24 724 19 HOH HOH . H 3 HOH B 25 725 119 HOH HOH . H 3 HOH B 26 726 46 HOH HOH . H 3 HOH B 27 727 16 HOH HOH . H 3 HOH B 28 728 181 HOH HOH . H 3 HOH B 29 729 5 HOH HOH . H 3 HOH B 30 730 201 HOH HOH . H 3 HOH B 31 731 179 HOH HOH . H 3 HOH B 32 732 74 HOH HOH . H 3 HOH B 33 733 163 HOH HOH . H 3 HOH B 34 734 198 HOH HOH . H 3 HOH B 35 735 34 HOH HOH . H 3 HOH B 36 736 208 HOH HOH . H 3 HOH B 37 737 178 HOH HOH . H 3 HOH B 38 738 75 HOH HOH . H 3 HOH B 39 739 79 HOH HOH . H 3 HOH B 40 740 3 HOH HOH . H 3 HOH B 41 741 135 HOH HOH . H 3 HOH B 42 742 30 HOH HOH . H 3 HOH B 43 743 77 HOH HOH . H 3 HOH B 44 744 99 HOH HOH . H 3 HOH B 45 745 73 HOH HOH . H 3 HOH B 46 746 26 HOH HOH . H 3 HOH B 47 747 155 HOH HOH . H 3 HOH B 48 748 63 HOH HOH . H 3 HOH B 49 749 10 HOH HOH . H 3 HOH B 50 750 81 HOH HOH . H 3 HOH B 51 751 18 HOH HOH . H 3 HOH B 52 752 104 HOH HOH . H 3 HOH B 53 753 44 HOH HOH . H 3 HOH B 54 754 243 HOH HOH . H 3 HOH B 55 755 199 HOH HOH . H 3 HOH B 56 756 228 HOH HOH . H 3 HOH B 57 757 117 HOH HOH . H 3 HOH B 58 758 48 HOH HOH . H 3 HOH B 59 759 146 HOH HOH . H 3 HOH B 60 760 87 HOH HOH . H 3 HOH B 61 761 12 HOH HOH . H 3 HOH B 62 762 215 HOH HOH . H 3 HOH B 63 763 54 HOH HOH . H 3 HOH B 64 764 29 HOH HOH . H 3 HOH B 65 765 92 HOH HOH . H 3 HOH B 66 766 157 HOH HOH . H 3 HOH B 67 767 219 HOH HOH . H 3 HOH B 68 768 45 HOH HOH . H 3 HOH B 69 769 159 HOH HOH . H 3 HOH B 70 770 202 HOH HOH . H 3 HOH B 71 771 66 HOH HOH . H 3 HOH B 72 772 203 HOH HOH . H 3 HOH B 73 773 141 HOH HOH . H 3 HOH B 74 774 204 HOH HOH . H 3 HOH B 75 775 234 HOH HOH . H 3 HOH B 76 776 47 HOH HOH . H 3 HOH B 77 777 195 HOH HOH . H 3 HOH B 78 778 223 HOH HOH . H 3 HOH B 79 779 233 HOH HOH . H 3 HOH B 80 780 222 HOH HOH . H 3 HOH B 81 781 232 HOH HOH . H 3 HOH B 82 782 206 HOH HOH . H 3 HOH B 83 783 39 HOH HOH . H 3 HOH B 84 784 118 HOH HOH . H 3 HOH B 85 785 167 HOH HOH . H 3 HOH B 86 786 23 HOH HOH . H 3 HOH B 87 787 78 HOH HOH . H 3 HOH B 88 788 110 HOH HOH . H 3 HOH B 89 789 95 HOH HOH . H 3 HOH B 90 790 125 HOH HOH . H 3 HOH B 91 791 50 HOH HOH . H 3 HOH B 92 792 229 HOH HOH . H 3 HOH B 93 793 160 HOH HOH . H 3 HOH B 94 794 127 HOH HOH . H 3 HOH B 95 795 183 HOH HOH . H 3 HOH B 96 796 177 HOH HOH . H 3 HOH B 97 797 214 HOH HOH . H 3 HOH B 98 798 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 24.639 17.013 -33.997 1 70.3 ? P PO4 602 B 1 HETATM 2 O O1 PO4 . . . E 2 24.353 17.503 -35.401 1 61 ? O1 PO4 602 B 1 HETATM 3 O O2 PO4 . . . E 2 25.983 17.532 -33.537 1 62.67 ? O2 PO4 602 B 1 HETATM 4 O O3 PO4 . . . E 2 24.632 15.5 -34.019 1 66.47 ? O3 PO4 602 B 1 HETATM 5 O O4 PO4 . . . E 2 23.587 17.512 -33.028 1 59.92 ? O4 PO4 602 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #