data_6AU2 # _model_server_result.job_id syv3QF020T2NVfJAzkWcxw _model_server_result.datetime_utc '2024-11-26 22:22:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6au2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":510}' # _entry.id 6AU2 # _exptl.entry_id 6AU2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AU2 _cell.length_a 55.202 _cell.length_b 63.273 _cell.length_c 69.859 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AU2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 140 A CYS 329 1_555 C S2 BME . A BME 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? covale ? covale2 A SG CYS 196 A CYS 385 1_555 D S2 BME . A BME 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 6AU2 _atom_sites.fract_transf_matrix[1][1] 0.018115 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CGJ A 1 501 1 CGJ XXX . C 3 BME A 1 502 1 BME BME . D 3 BME A 1 503 2 BME BME . E 4 SO4 A 1 504 2 SO4 SO4 . F 4 SO4 A 1 505 3 SO4 SO4 . G 4 SO4 A 1 506 4 SO4 SO4 . H 4 SO4 A 1 507 5 SO4 SO4 . I 4 SO4 A 1 508 6 SO4 SO4 . J 5 EDO A 1 509 1 EDO EDO . K 5 EDO A 1 510 3 EDO EDO . L 5 EDO A 1 511 5 EDO EDO . M 5 EDO A 1 512 6 EDO EDO . N 5 EDO A 1 513 7 EDO EDO . O 5 EDO A 1 514 9 EDO EDO . P 6 UNX A 1 515 1001 UNX UNX . Q 6 UNX A 1 516 1002 UNX UNX . R 6 UNX A 1 517 1003 UNX UNX . S 6 UNX A 1 518 1004 UNX UNX . T 6 UNX A 1 519 1005 UNX UNX . U 6 UNX A 1 520 1006 UNX UNX . V 6 UNX A 1 521 1007 UNX UNX . W 6 UNX A 1 522 1008 UNX UNX . X 6 UNX A 1 523 1009 UNX UNX . Y 6 UNX A 1 524 1010 UNX UNX . Z 6 UNX A 1 525 1011 UNX UNX . AA 6 UNX A 1 526 1012 UNX UNX . BA 6 UNX A 1 527 1013 UNX UNX . CA 7 HOH A 1 601 89 HOH HOH . CA 7 HOH A 2 602 147 HOH HOH . CA 7 HOH A 3 603 51 HOH HOH . CA 7 HOH A 4 604 37 HOH HOH . CA 7 HOH A 5 605 119 HOH HOH . CA 7 HOH A 6 606 82 HOH HOH . CA 7 HOH A 7 607 54 HOH HOH . CA 7 HOH A 8 608 129 HOH HOH . CA 7 HOH A 9 609 115 HOH HOH . CA 7 HOH A 10 610 2 HOH HOH . CA 7 HOH A 11 611 143 HOH HOH . CA 7 HOH A 12 612 150 HOH HOH . CA 7 HOH A 13 613 161 HOH HOH . CA 7 HOH A 14 614 92 HOH HOH . CA 7 HOH A 15 615 140 HOH HOH . CA 7 HOH A 16 616 125 HOH HOH . CA 7 HOH A 17 617 149 HOH HOH . CA 7 HOH A 18 618 38 HOH HOH . CA 7 HOH A 19 619 95 HOH HOH . CA 7 HOH A 20 620 41 HOH HOH . CA 7 HOH A 21 621 18 HOH HOH . CA 7 HOH A 22 622 144 HOH HOH . CA 7 HOH A 23 623 176 HOH HOH . CA 7 HOH A 24 624 33 HOH HOH . CA 7 HOH A 25 625 105 HOH HOH . CA 7 HOH A 26 626 167 HOH HOH . CA 7 HOH A 27 627 63 HOH HOH . CA 7 HOH A 28 628 67 HOH HOH . CA 7 HOH A 29 629 175 HOH HOH . CA 7 HOH A 30 630 68 HOH HOH . CA 7 HOH A 31 631 14 HOH HOH . CA 7 HOH A 32 632 5 HOH HOH . CA 7 HOH A 33 633 131 HOH HOH . CA 7 HOH A 34 634 57 HOH HOH . CA 7 HOH A 35 635 15 HOH HOH . CA 7 HOH A 36 636 43 HOH HOH . CA 7 HOH A 37 637 80 HOH HOH . CA 7 HOH A 38 638 173 HOH HOH . CA 7 HOH A 39 639 145 HOH HOH . CA 7 HOH A 40 640 126 HOH HOH . CA 7 HOH A 41 641 136 HOH HOH . CA 7 HOH A 42 642 3 HOH HOH . CA 7 HOH A 43 643 142 HOH HOH . CA 7 HOH A 44 644 70 HOH HOH . CA 7 HOH A 45 645 133 HOH HOH . CA 7 HOH A 46 646 29 HOH HOH . CA 7 HOH A 47 647 146 HOH HOH . CA 7 HOH A 48 648 13 HOH HOH . CA 7 HOH A 49 649 135 HOH HOH . CA 7 HOH A 50 650 94 HOH HOH . CA 7 HOH A 51 651 61 HOH HOH . CA 7 HOH A 52 652 113 HOH HOH . CA 7 HOH A 53 653 12 HOH HOH . CA 7 HOH A 54 654 85 HOH HOH . CA 7 HOH A 55 655 107 HOH HOH . CA 7 HOH A 56 656 153 HOH HOH . CA 7 HOH A 57 657 130 HOH HOH . CA 7 HOH A 58 658 8 HOH HOH . CA 7 HOH A 59 659 101 HOH HOH . CA 7 HOH A 60 660 36 HOH HOH . CA 7 HOH A 61 661 112 HOH HOH . CA 7 HOH A 62 662 172 HOH HOH . CA 7 HOH A 63 663 156 HOH HOH . CA 7 HOH A 64 664 99 HOH HOH . CA 7 HOH A 65 665 100 HOH HOH . CA 7 HOH A 66 666 98 HOH HOH . CA 7 HOH A 67 667 127 HOH HOH . CA 7 HOH A 68 668 121 HOH HOH . CA 7 HOH A 69 669 102 HOH HOH . CA 7 HOH A 70 670 93 HOH HOH . CA 7 HOH A 71 671 137 HOH HOH . CA 7 HOH A 72 672 50 HOH HOH . CA 7 HOH A 73 673 81 HOH HOH . CA 7 HOH A 74 674 28 HOH HOH . CA 7 HOH A 75 675 79 HOH HOH . CA 7 HOH A 76 676 55 HOH HOH . CA 7 HOH A 77 677 45 HOH HOH . CA 7 HOH A 78 678 21 HOH HOH . CA 7 HOH A 79 679 6 HOH HOH . CA 7 HOH A 80 680 97 HOH HOH . CA 7 HOH A 81 681 24 HOH HOH . CA 7 HOH A 82 682 17 HOH HOH . CA 7 HOH A 83 683 9 HOH HOH . CA 7 HOH A 84 684 151 HOH HOH . CA 7 HOH A 85 685 10 HOH HOH . CA 7 HOH A 86 686 78 HOH HOH . CA 7 HOH A 87 687 40 HOH HOH . CA 7 HOH A 88 688 7 HOH HOH . CA 7 HOH A 89 689 160 HOH HOH . CA 7 HOH A 90 690 32 HOH HOH . CA 7 HOH A 91 691 58 HOH HOH . CA 7 HOH A 92 692 69 HOH HOH . CA 7 HOH A 93 693 56 HOH HOH . CA 7 HOH A 94 694 23 HOH HOH . CA 7 HOH A 95 695 30 HOH HOH . CA 7 HOH A 96 696 155 HOH HOH . CA 7 HOH A 97 697 117 HOH HOH . CA 7 HOH A 98 698 39 HOH HOH . CA 7 HOH A 99 699 72 HOH HOH . CA 7 HOH A 100 700 26 HOH HOH . CA 7 HOH A 101 701 11 HOH HOH . CA 7 HOH A 102 702 34 HOH HOH . CA 7 HOH A 103 703 60 HOH HOH . CA 7 HOH A 104 704 134 HOH HOH . CA 7 HOH A 105 705 1 HOH HOH . CA 7 HOH A 106 706 59 HOH HOH . CA 7 HOH A 107 707 124 HOH HOH . CA 7 HOH A 108 708 86 HOH HOH . CA 7 HOH A 109 709 27 HOH HOH . CA 7 HOH A 110 710 180 HOH HOH . CA 7 HOH A 111 711 75 HOH HOH . CA 7 HOH A 112 712 46 HOH HOH . CA 7 HOH A 113 713 47 HOH HOH . CA 7 HOH A 114 714 35 HOH HOH . CA 7 HOH A 115 715 4 HOH HOH . CA 7 HOH A 116 716 19 HOH HOH . CA 7 HOH A 117 717 109 HOH HOH . CA 7 HOH A 118 718 123 HOH HOH . CA 7 HOH A 119 719 76 HOH HOH . CA 7 HOH A 120 720 31 HOH HOH . CA 7 HOH A 121 721 139 HOH HOH . CA 7 HOH A 122 722 148 HOH HOH . CA 7 HOH A 123 723 16 HOH HOH . CA 7 HOH A 124 724 74 HOH HOH . CA 7 HOH A 125 725 103 HOH HOH . CA 7 HOH A 126 726 128 HOH HOH . CA 7 HOH A 127 727 66 HOH HOH . CA 7 HOH A 128 728 65 HOH HOH . CA 7 HOH A 129 729 52 HOH HOH . CA 7 HOH A 130 730 163 HOH HOH . CA 7 HOH A 131 731 49 HOH HOH . CA 7 HOH A 132 732 84 HOH HOH . CA 7 HOH A 133 733 170 HOH HOH . CA 7 HOH A 134 734 132 HOH HOH . CA 7 HOH A 135 735 44 HOH HOH . CA 7 HOH A 136 736 20 HOH HOH . CA 7 HOH A 137 737 42 HOH HOH . CA 7 HOH A 138 738 73 HOH HOH . CA 7 HOH A 139 739 154 HOH HOH . CA 7 HOH A 140 740 91 HOH HOH . CA 7 HOH A 141 741 108 HOH HOH . CA 7 HOH A 142 742 71 HOH HOH . CA 7 HOH A 143 743 106 HOH HOH . CA 7 HOH A 144 744 96 HOH HOH . CA 7 HOH A 145 745 88 HOH HOH . CA 7 HOH A 146 746 114 HOH HOH . CA 7 HOH A 147 747 141 HOH HOH . CA 7 HOH A 148 748 48 HOH HOH . CA 7 HOH A 149 749 90 HOH HOH . CA 7 HOH A 150 750 165 HOH HOH . CA 7 HOH A 151 751 171 HOH HOH . CA 7 HOH A 152 752 87 HOH HOH . CA 7 HOH A 153 753 104 HOH HOH . CA 7 HOH A 154 754 64 HOH HOH . CA 7 HOH A 155 755 120 HOH HOH . CA 7 HOH A 156 756 53 HOH HOH . CA 7 HOH A 157 757 181 HOH HOH . CA 7 HOH A 158 758 110 HOH HOH . CA 7 HOH A 159 759 158 HOH HOH . CA 7 HOH A 160 760 178 HOH HOH . CA 7 HOH A 161 761 118 HOH HOH . CA 7 HOH A 162 762 77 HOH HOH . CA 7 HOH A 163 763 164 HOH HOH . CA 7 HOH A 164 764 22 HOH HOH . CA 7 HOH A 165 765 138 HOH HOH . CA 7 HOH A 166 766 174 HOH HOH . CA 7 HOH A 167 767 111 HOH HOH . CA 7 HOH A 168 768 62 HOH HOH . CA 7 HOH A 169 769 152 HOH HOH . CA 7 HOH A 170 770 122 HOH HOH . CA 7 HOH A 171 771 157 HOH HOH . CA 7 HOH A 172 772 177 HOH HOH . CA 7 HOH A 173 773 159 HOH HOH . CA 7 HOH A 174 774 179 HOH HOH . CA 7 HOH A 175 775 116 HOH HOH . CA 7 HOH A 176 776 162 HOH HOH . CA 7 HOH A 177 777 169 HOH HOH . CA 7 HOH A 178 778 166 HOH HOH . CA 7 HOH A 179 779 83 HOH HOH . CA 7 HOH A 180 780 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . K 5 33.276 59.854 -4.625 1 42.21 ? C1 EDO 510 A 1 HETATM 2 O O1 EDO . . . K 5 32.129 59.298 -3.966 1 45.38 ? O1 EDO 510 A 1 HETATM 3 C C2 EDO . . . K 5 33.224 61.376 -4.542 1 41.89 ? C2 EDO 510 A 1 HETATM 4 O O2 EDO . . . K 5 32.012 61.846 -5.147 1 43.34 ? O2 EDO 510 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #