data_6AU8 # _model_server_result.job_id z8nhfKFnt1ndKC-rzTwiqw _model_server_result.datetime_utc '2024-12-27 02:29:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6au8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1101}' # _entry.id 6AU8 # _exptl.entry_id 6AU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AU8 _cell.length_a 41.66 _cell.length_b 84.56 _cell.length_c 102.58 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6AU8 _atom_sites.fract_transf_matrix[1][1] 0.024004 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009748 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 401 1 GOL GOL . D 3 GOL C 1 1101 3 GOL GOL . E 4 HOH A 1 501 206 HOH HOH . E 4 HOH A 2 502 74 HOH HOH . E 4 HOH A 3 503 44 HOH HOH . E 4 HOH A 4 504 95 HOH HOH . E 4 HOH A 5 505 65 HOH HOH . E 4 HOH A 6 506 102 HOH HOH . E 4 HOH A 7 507 63 HOH HOH . E 4 HOH A 8 508 172 HOH HOH . E 4 HOH A 9 509 205 HOH HOH . E 4 HOH A 10 510 118 HOH HOH . E 4 HOH A 11 511 97 HOH HOH . E 4 HOH A 12 512 35 HOH HOH . E 4 HOH A 13 513 4 HOH HOH . E 4 HOH A 14 514 192 HOH HOH . E 4 HOH A 15 515 122 HOH HOH . E 4 HOH A 16 516 209 HOH HOH . E 4 HOH A 17 517 1 HOH HOH . E 4 HOH A 18 518 57 HOH HOH . E 4 HOH A 19 519 86 HOH HOH . E 4 HOH A 20 520 8 HOH HOH . E 4 HOH A 21 521 193 HOH HOH . E 4 HOH A 22 522 6 HOH HOH . E 4 HOH A 23 523 215 HOH HOH . E 4 HOH A 24 524 54 HOH HOH . E 4 HOH A 25 525 110 HOH HOH . E 4 HOH A 26 526 124 HOH HOH . E 4 HOH A 27 527 111 HOH HOH . E 4 HOH A 28 528 2 HOH HOH . E 4 HOH A 29 529 129 HOH HOH . E 4 HOH A 30 530 153 HOH HOH . E 4 HOH A 31 531 43 HOH HOH . E 4 HOH A 32 532 7 HOH HOH . E 4 HOH A 33 533 36 HOH HOH . E 4 HOH A 34 534 75 HOH HOH . E 4 HOH A 35 535 15 HOH HOH . E 4 HOH A 36 536 157 HOH HOH . E 4 HOH A 37 537 79 HOH HOH . E 4 HOH A 38 538 105 HOH HOH . E 4 HOH A 39 539 23 HOH HOH . E 4 HOH A 40 540 52 HOH HOH . E 4 HOH A 41 541 216 HOH HOH . E 4 HOH A 42 542 194 HOH HOH . E 4 HOH A 43 543 72 HOH HOH . E 4 HOH A 44 544 34 HOH HOH . E 4 HOH A 45 545 103 HOH HOH . E 4 HOH A 46 546 109 HOH HOH . E 4 HOH A 47 547 126 HOH HOH . E 4 HOH A 48 548 64 HOH HOH . E 4 HOH A 49 549 49 HOH HOH . E 4 HOH A 50 550 179 HOH HOH . E 4 HOH A 51 551 5 HOH HOH . E 4 HOH A 52 552 45 HOH HOH . E 4 HOH A 53 553 217 HOH HOH . E 4 HOH A 54 554 213 HOH HOH . E 4 HOH A 55 555 158 HOH HOH . E 4 HOH A 56 556 214 HOH HOH . E 4 HOH A 57 557 130 HOH HOH . E 4 HOH A 58 558 71 HOH HOH . E 4 HOH A 59 559 106 HOH HOH . E 4 HOH A 60 560 90 HOH HOH . E 4 HOH A 61 561 135 HOH HOH . E 4 HOH A 62 562 73 HOH HOH . E 4 HOH A 63 563 53 HOH HOH . E 4 HOH A 64 564 151 HOH HOH . E 4 HOH A 65 565 47 HOH HOH . E 4 HOH A 66 566 204 HOH HOH . E 4 HOH A 67 567 208 HOH HOH . E 4 HOH A 68 568 81 HOH HOH . E 4 HOH A 69 569 121 HOH HOH . E 4 HOH A 70 570 115 HOH HOH . E 4 HOH A 71 571 30 HOH HOH . E 4 HOH A 72 572 11 HOH HOH . E 4 HOH A 73 573 41 HOH HOH . E 4 HOH A 74 574 104 HOH HOH . E 4 HOH A 75 575 14 HOH HOH . E 4 HOH A 76 576 29 HOH HOH . E 4 HOH A 77 577 32 HOH HOH . E 4 HOH A 78 578 203 HOH HOH . E 4 HOH A 79 579 17 HOH HOH . E 4 HOH A 80 580 3 HOH HOH . E 4 HOH A 81 581 10 HOH HOH . E 4 HOH A 82 582 77 HOH HOH . E 4 HOH A 83 583 218 HOH HOH . E 4 HOH A 84 584 21 HOH HOH . E 4 HOH A 85 585 131 HOH HOH . E 4 HOH A 86 586 100 HOH HOH . E 4 HOH A 87 587 37 HOH HOH . E 4 HOH A 88 588 191 HOH HOH . E 4 HOH A 89 589 125 HOH HOH . E 4 HOH A 90 590 91 HOH HOH . E 4 HOH A 91 591 196 HOH HOH . E 4 HOH A 92 592 40 HOH HOH . E 4 HOH A 93 593 68 HOH HOH . E 4 HOH A 94 594 167 HOH HOH . E 4 HOH A 95 595 66 HOH HOH . E 4 HOH A 96 596 99 HOH HOH . E 4 HOH A 97 597 116 HOH HOH . E 4 HOH A 98 598 178 HOH HOH . E 4 HOH A 99 599 185 HOH HOH . E 4 HOH A 100 600 96 HOH HOH . E 4 HOH A 101 601 148 HOH HOH . E 4 HOH A 102 602 85 HOH HOH . E 4 HOH A 103 603 67 HOH HOH . E 4 HOH A 104 604 117 HOH HOH . E 4 HOH A 105 605 22 HOH HOH . E 4 HOH A 106 606 200 HOH HOH . E 4 HOH A 107 607 169 HOH HOH . E 4 HOH A 108 608 190 HOH HOH . E 4 HOH A 109 609 123 HOH HOH . E 4 HOH A 110 610 210 HOH HOH . E 4 HOH A 111 611 134 HOH HOH . E 4 HOH A 112 612 127 HOH HOH . E 4 HOH A 113 613 147 HOH HOH . E 4 HOH A 114 614 211 HOH HOH . E 4 HOH A 115 615 93 HOH HOH . E 4 HOH A 116 616 42 HOH HOH . E 4 HOH A 117 617 87 HOH HOH . E 4 HOH A 118 618 212 HOH HOH . E 4 HOH A 119 619 51 HOH HOH . E 4 HOH A 120 620 159 HOH HOH . E 4 HOH A 121 621 156 HOH HOH . E 4 HOH A 122 622 201 HOH HOH . E 4 HOH A 123 623 176 HOH HOH . E 4 HOH A 124 624 154 HOH HOH . E 4 HOH A 125 625 136 HOH HOH . E 4 HOH A 126 626 177 HOH HOH . E 4 HOH A 127 627 180 HOH HOH . F 4 HOH C 1 1201 62 HOH HOH . F 4 HOH C 2 1202 55 HOH HOH . F 4 HOH C 3 1203 60 HOH HOH . F 4 HOH C 4 1204 207 HOH HOH . F 4 HOH C 5 1205 82 HOH HOH . F 4 HOH C 6 1206 24 HOH HOH . F 4 HOH C 7 1207 182 HOH HOH . F 4 HOH C 8 1208 101 HOH HOH . F 4 HOH C 9 1209 132 HOH HOH . F 4 HOH C 10 1210 58 HOH HOH . F 4 HOH C 11 1211 26 HOH HOH . F 4 HOH C 12 1212 198 HOH HOH . F 4 HOH C 13 1213 27 HOH HOH . F 4 HOH C 14 1214 31 HOH HOH . F 4 HOH C 15 1215 119 HOH HOH . F 4 HOH C 16 1216 197 HOH HOH . F 4 HOH C 17 1217 16 HOH HOH . F 4 HOH C 18 1218 144 HOH HOH . F 4 HOH C 19 1219 12 HOH HOH . F 4 HOH C 20 1220 161 HOH HOH . F 4 HOH C 21 1221 13 HOH HOH . F 4 HOH C 22 1222 70 HOH HOH . F 4 HOH C 23 1223 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -2.716 -57.998 -46.668 1 49.69 ? C1 GOL 1101 C 1 HETATM 2 O O1 GOL . . . D 3 -2.433 -58.097 -48.049 1 47.95 ? O1 GOL 1101 C 1 HETATM 3 C C2 GOL . . . D 3 -4.217 -57.959 -46.341 1 41.09 ? C2 GOL 1101 C 1 HETATM 4 O O2 GOL . . . D 3 -4.477 -58.554 -45.078 1 43.29 ? O2 GOL 1101 C 1 HETATM 5 C C3 GOL . . . D 3 -4.726 -56.526 -46.327 1 36.74 ? C3 GOL 1101 C 1 HETATM 6 O O3 GOL . . . D 3 -6.02 -56.48 -46.896 1 45.08 ? O3 GOL 1101 C 1 HETATM 7 H H11 GOL . . . D 3 -2.265 -58.848 -46.155 1 59.63 ? H11 GOL 1101 C 1 HETATM 8 H H12 GOL . . . D 3 -2.246 -57.096 -46.276 1 59.63 ? H12 GOL 1101 C 1 HETATM 9 H HO1 GOL . . . D 3 -1.464 -58.051 -48.188 1 57.54 ? HO1 GOL 1101 C 1 HETATM 10 H H2 GOL . . . D 3 -4.752 -58.506 -47.118 1 49.3 ? H2 GOL 1101 C 1 HETATM 11 H HO2 GOL . . . D 3 -4.027 -58.04 -44.376 1 51.95 ? HO2 GOL 1101 C 1 HETATM 12 H H31 GOL . . . D 3 -4.761 -56.157 -45.302 1 44.09 ? H31 GOL 1101 C 1 HETATM 13 H H32 GOL . . . D 3 -4.05 -55.889 -46.896 1 44.09 ? H32 GOL 1101 C 1 HETATM 14 H HO3 GOL . . . D 3 -6.519 -57.284 -46.64 1 54.1 ? HO3 GOL 1101 C 1 # _model_server_stats.io_time_ms 98 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #