data_6AUE # _model_server_result.job_id 61G6i9hA3Fozj6_qvDu-Bw _model_server_result.datetime_utc '2024-11-28 13:08:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aue # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AUE # _exptl.entry_id 6AUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1039.569 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AUE _cell.length_a 57.945 _cell.length_b 57.945 _cell.length_c 184.565 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C35 H45 Co4 N7 O13 S' _chem_comp.formula_weight 1039.569 _chem_comp.id OL3 _chem_comp.mon_nstd_flag . _chem_comp.name N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O04 C13 OL3 doub 224 n n C13 N03 OL3 sing 225 n n C13 N02 OL3 sing 226 n n N03 C11 OL3 sing 227 n n C11 C10 OL3 sing 228 n n C11 C12 OL3 sing 229 n n C10 S01 OL3 sing 230 n n S01 C09 OL3 sing 231 n n N02 C12 OL3 sing 232 n n C12 C09 OL3 sing 233 n n C09 C08 OL3 sing 234 n n C08 C07 OL3 sing 235 n n C07 C06 OL3 sing 236 n n C06 C05 OL3 sing 237 n n C05 C01 OL3 sing 238 n n C01 O01 OL3 doub 239 n n C01 N01 OL3 sing 240 n n N01 C02 OL3 sing 241 n n C02 C37 OL3 sing 242 n n C37 C04 OL3 sing 243 n n C04 O14 OL3 sing 244 n n C04 O03 OL3 sing 245 n n O14 CO2 OL3 sing 246 n n O03 CO4 OL3 sing 247 n n CO4 O05 OL3 sing 248 n n CO4 O07 OL3 sing 249 n n CO4 N07 OL3 sing 250 n n CO4 O12 OL3 sing 251 n n CO4 O15 OL3 sing 252 n n O05 CO1 OL3 sing 253 n n O05 CO2 OL3 sing 254 n n O07 CO1 OL3 sing 255 n n O07 CO3 OL3 sing 256 n n N07 C44 OL3 doub 257 n y N07 C40 OL3 sing 258 n y C44 C43 OL3 sing 259 n y C43 C42 OL3 doub 260 n y C42 C41 OL3 sing 261 n y C41 C40 OL3 doub 262 n y CO1 O10 OL3 sing 263 n n CO1 O06 OL3 sing 264 n n CO1 O08 OL3 sing 265 n n N04 C22 OL3 doub 266 n y N04 C18 OL3 sing 267 n y C22 C21 OL3 sing 268 n y C21 C20 OL3 doub 269 n y C20 C19 OL3 sing 270 n y C19 C18 OL3 doub 271 n y O12 CO3 OL3 sing 272 n n O12 CO2 OL3 sing 273 n n CO3 O11 OL3 sing 274 n n CO3 O06 OL3 sing 275 n n N06 C34 OL3 doub 276 n y N06 C28 OL3 sing 277 n y C34 C35 OL3 sing 278 n y C35 C30 OL3 doub 279 n y C30 C29 OL3 sing 280 n y C29 C28 OL3 doub 281 n y O11 C16 OL3 sing 282 n n C16 C17 OL3 sing 283 n n C16 O10 OL3 sing 284 n n O06 CO2 OL3 sing 285 n n CO2 O09 OL3 sing 286 n n CO2 N05 OL3 sing 287 n n N05 C32 OL3 doub 288 n y N05 C24 OL3 sing 289 n y C32 C33 OL3 sing 290 n y C33 C26 OL3 doub 291 n y C26 C25 OL3 sing 292 n y C25 C24 OL3 doub 293 n y CO1 N04 OL3 sing 294 n n CO3 N06 OL3 sing 295 n n N03 H1 OL3 sing 296 n n C11 H2 OL3 sing 297 n n C10 H3 OL3 sing 298 n n C10 H4 OL3 sing 299 n n N02 H5 OL3 sing 300 n n C12 H6 OL3 sing 301 n n C09 H7 OL3 sing 302 n n C08 H8 OL3 sing 303 n n C08 H9 OL3 sing 304 n n C07 H10 OL3 sing 305 n n C07 H11 OL3 sing 306 n n C06 H12 OL3 sing 307 n n C06 H13 OL3 sing 308 n n C05 H14 OL3 sing 309 n n C05 H15 OL3 sing 310 n n N01 H16 OL3 sing 311 n n C02 H17 OL3 sing 312 n n C02 H18 OL3 sing 313 n n C37 H19 OL3 sing 314 n n C37 H20 OL3 sing 315 n n C04 H21 OL3 sing 316 n n C44 H22 OL3 sing 317 n n C43 H23 OL3 sing 318 n n C42 H24 OL3 sing 319 n n C41 H25 OL3 sing 320 n n C40 H26 OL3 sing 321 n n C22 H27 OL3 sing 322 n n C21 H28 OL3 sing 323 n n C20 H29 OL3 sing 324 n n C19 H30 OL3 sing 325 n n C18 H31 OL3 sing 326 n n C34 H32 OL3 sing 327 n n C35 H33 OL3 sing 328 n n C30 H34 OL3 sing 329 n n C29 H35 OL3 sing 330 n n C28 H36 OL3 sing 331 n n C16 H37 OL3 sing 332 n n C17 H38 OL3 sing 333 n n C17 H39 OL3 sing 334 n n C17 H40 OL3 sing 335 n n C32 H44 OL3 sing 336 n n C33 H45 OL3 sing 337 n n C26 H46 OL3 sing 338 n n C25 H47 OL3 sing 339 n n C24 H48 OL3 sing 340 n n # _atom_sites.entry_id 6AUE _atom_sites.fract_transf_matrix[1][1] 0.017258 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OL3 A 1 201 1 OL3 OL3 . C 3 HOH A 1 301 74 HOH HOH . C 3 HOH A 2 302 4 HOH HOH . C 3 HOH A 3 303 40 HOH HOH . C 3 HOH A 4 304 7 HOH HOH . C 3 HOH A 5 305 38 HOH HOH . C 3 HOH A 6 306 18 HOH HOH . C 3 HOH A 7 307 45 HOH HOH . C 3 HOH A 8 308 9 HOH HOH . C 3 HOH A 9 309 60 HOH HOH . C 3 HOH A 10 310 1 HOH HOH . C 3 HOH A 11 311 39 HOH HOH . C 3 HOH A 12 312 20 HOH HOH . C 3 HOH A 13 313 25 HOH HOH . C 3 HOH A 14 314 5 HOH HOH . C 3 HOH A 15 315 8 HOH HOH . C 3 HOH A 16 316 32 HOH HOH . C 3 HOH A 17 317 10 HOH HOH . C 3 HOH A 18 318 67 HOH HOH . C 3 HOH A 19 319 61 HOH HOH . C 3 HOH A 20 320 11 HOH HOH . C 3 HOH A 21 321 29 HOH HOH . C 3 HOH A 22 322 31 HOH HOH . C 3 HOH A 23 323 17 HOH HOH . C 3 HOH A 24 324 21 HOH HOH . C 3 HOH A 25 325 3 HOH HOH . C 3 HOH A 26 326 46 HOH HOH . C 3 HOH A 27 327 69 HOH HOH . C 3 HOH A 28 328 36 HOH HOH . C 3 HOH A 29 329 63 HOH HOH . C 3 HOH A 30 330 27 HOH HOH . C 3 HOH A 31 331 50 HOH HOH . C 3 HOH A 32 332 47 HOH HOH . C 3 HOH A 33 333 15 HOH HOH . C 3 HOH A 34 334 66 HOH HOH . C 3 HOH A 35 335 56 HOH HOH . C 3 HOH A 36 336 30 HOH HOH . C 3 HOH A 37 337 6 HOH HOH . C 3 HOH A 38 338 24 HOH HOH . C 3 HOH A 39 339 2 HOH HOH . C 3 HOH A 40 340 34 HOH HOH . C 3 HOH A 41 341 33 HOH HOH . C 3 HOH A 42 342 23 HOH HOH . C 3 HOH A 43 343 49 HOH HOH . C 3 HOH A 44 344 22 HOH HOH . C 3 HOH A 45 345 58 HOH HOH . C 3 HOH A 46 346 13 HOH HOH . C 3 HOH A 47 347 65 HOH HOH . C 3 HOH A 48 348 43 HOH HOH . C 3 HOH A 49 349 41 HOH HOH . C 3 HOH A 50 350 28 HOH HOH . C 3 HOH A 51 351 19 HOH HOH . C 3 HOH A 52 352 70 HOH HOH . C 3 HOH A 53 353 12 HOH HOH . C 3 HOH A 54 354 75 HOH HOH . C 3 HOH A 55 355 26 HOH HOH . C 3 HOH A 56 356 68 HOH HOH . C 3 HOH A 57 357 16 HOH HOH . C 3 HOH A 58 358 59 HOH HOH . C 3 HOH A 59 359 35 HOH HOH . C 3 HOH A 60 360 42 HOH HOH . C 3 HOH A 61 361 14 HOH HOH . C 3 HOH A 62 362 73 HOH HOH . C 3 HOH A 63 363 55 HOH HOH . C 3 HOH A 64 364 52 HOH HOH . C 3 HOH A 65 365 54 HOH HOH . C 3 HOH A 66 366 51 HOH HOH . C 3 HOH A 67 367 57 HOH HOH . C 3 HOH A 68 368 44 HOH HOH . C 3 HOH A 69 369 71 HOH HOH . C 3 HOH A 70 370 64 HOH HOH . C 3 HOH A 71 371 72 HOH HOH . C 3 HOH A 72 372 62 HOH HOH . C 3 HOH A 73 373 37 HOH HOH . C 3 HOH A 74 374 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O04 OL3 . . . B 2 -14.595 0.594 -8.208 1 14.07 ? O04 OL3 201 A 1 HETATM 2 C C13 OL3 . . . B 2 -13.362 0.495 -8.46 1 13.3 ? C13 OL3 201 A 1 HETATM 3 N N03 OL3 . . . B 2 -12.384 0.669 -7.567 1 14.28 ? N03 OL3 201 A 1 HETATM 4 C C11 OL3 . . . B 2 -11.065 0.55 -8.144 1 12.63 ? C11 OL3 201 A 1 HETATM 5 C C10 OL3 . . . B 2 -10.337 -0.707 -7.625 1 13.67 ? C10 OL3 201 A 1 HETATM 6 S S01 OL3 . . . B 2 -10.892 -2.102 -8.596 1 13.97 ? S01 OL3 201 A 1 HETATM 7 N N02 OL3 . . . B 2 -12.837 0.316 -9.69 1 12.62 ? N02 OL3 201 A 1 HETATM 8 C C12 OL3 . . . B 2 -11.369 0.273 -9.685 1 12.8 ? C12 OL3 201 A 1 HETATM 9 C C09 OL3 . . . B 2 -10.824 -1.116 -10.084 1 13.54 ? C09 OL3 201 A 1 HETATM 10 C C08 OL3 . . . B 2 -11.404 -1.685 -11.426 1 14.34 ? C08 OL3 201 A 1 HETATM 11 C C07 OL3 . . . B 2 -10.559 -2.81 -11.905 1 13.21 ? C07 OL3 201 A 1 HETATM 12 C C06 OL3 . . . B 2 -11.227 -3.449 -13.158 1 14.83 ? C06 OL3 201 A 1 HETATM 13 C C05 OL3 . . . B 2 -10.389 -4.613 -13.767 1 16.25 ? C05 OL3 201 A 1 HETATM 14 C C01 OL3 . . . B 2 -9.071 -4.037 -14.322 1 15.75 ? C01 OL3 201 A 1 HETATM 15 O O01 OL3 . . . B 2 -9.068 -2.975 -15.002 1 17.08 ? O01 OL3 201 A 1 HETATM 16 N N01 OL3 . . . B 2 -7.999 -4.787 -14.114 1 16.3 ? N01 OL3 201 A 1 HETATM 17 C C02 OL3 . . . B 2 -6.739 -4.306 -14.561 1 21.87 ? C02 OL3 201 A 1 HETATM 18 C C37 OL3 . . . B 2 -6.533 -5.009 -15.858 1 34.17 ? C37 OL3 201 A 1 HETATM 19 C C04 OL3 . . . B 2 -5.454 -4.329 -16.568 1 44.02 ? C04 OL3 201 A 1 HETATM 20 O O14 OL3 . . . B 2 -5.399 -4.7 -17.839 1 45.04 ? O14 OL3 201 A 1 HETATM 21 O O03 OL3 . . . B 2 -4.736 -3.384 -15.926 1 50.28 ? O03 OL3 201 A 1 HETATM 22 CO CO4 OL3 . . . B 2 -3.222 -2.363 -16.819 1 50.38 ? CO4 OL3 201 A 1 HETATM 23 O O05 OL3 . . . B 2 -2.493 -4.035 -17.521 1 44.84 ? O05 OL3 201 A 1 HETATM 24 O O07 OL3 . . . B 2 -1.812 -1.541 -17.74 1 48.67 ? O07 OL3 201 A 1 HETATM 25 N N07 OL3 . . . B 2 -1.99 -2.743 -14.887 1 49.67 ? N07 OL3 201 A 1 HETATM 26 C C44 OL3 . . . B 2 -2.627 -3.599 -14.038 1 45.93 ? C44 OL3 201 A 1 HETATM 27 C C43 OL3 . . . B 2 -1.946 -3.879 -12.833 1 51.02 ? C43 OL3 201 A 1 HETATM 28 C C42 OL3 . . . B 2 -0.703 -3.284 -12.542 1 44.46 ? C42 OL3 201 A 1 HETATM 29 C C41 OL3 . . . B 2 -0.18 -2.426 -13.356 1 43.74 ? C41 OL3 201 A 1 HETATM 30 C C40 OL3 . . . B 2 -0.805 -2.145 -14.501 1 59.31 ? C40 OL3 201 A 1 HETATM 31 CO CO1 OL3 . . . B 2 -1.21 -3.273 -18.661 1 57.82 ? CO1 OL3 201 A 1 HETATM 32 N N04 OL3 . . . B 2 0.556 -3.9 -16.82 1 59.44 ? N04 OL3 201 A 1 HETATM 33 C C22 OL3 . . . B 2 1.763 -3.279 -16.787 1 70.96 ? C22 OL3 201 A 1 HETATM 34 C C21 OL3 . . . B 2 2.663 -3.692 -15.79 1 74.1 ? C21 OL3 201 A 1 HETATM 35 C C20 OL3 . . . B 2 2.26 -4.713 -14.907 1 67.66 ? C20 OL3 201 A 1 HETATM 36 C C19 OL3 . . . B 2 1.083 -5.271 -14.989 1 63.49 ? C19 OL3 201 A 1 HETATM 37 C C18 OL3 . . . B 2 0.265 -4.911 -15.937 1 71.43 ? C18 OL3 201 A 1 HETATM 38 O O12 OL3 . . . B 2 -4.305 -1.898 -18.393 1 41.71 ? O12 OL3 201 A 1 HETATM 39 CO CO3 OL3 . . . B 2 -2.9 -1.19 -19.452 1 61.39 ? CO3 OL3 201 A 1 HETATM 40 N N06 OL3 . . . B 2 -3.867 -0.269 -21.728 1 65.39 ? N06 OL3 201 A 1 HETATM 41 C C34 OL3 . . . B 2 -3.903 -0.982 -22.89 1 81.23 ? C34 OL3 201 A 1 HETATM 42 C C35 OL3 . . . B 2 -4.405 -0.452 -23.971 1 87.98 ? C35 OL3 201 A 1 HETATM 43 C C30 OL3 . . . B 2 -4.871 0.771 -23.995 1 96.82 ? C30 OL3 201 A 1 HETATM 44 C C29 OL3 . . . B 2 -4.864 1.577 -22.843 1 94.34 ? C29 OL3 201 A 1 HETATM 45 C C28 OL3 . . . B 2 -4.335 1.013 -21.674 1 84.83 ? C28 OL3 201 A 1 HETATM 46 O O11 OL3 . . . B 2 -1.381 -0.672 -20.749 1 53.7 ? O11 OL3 201 A 1 HETATM 47 C C16 OL3 . . . B 2 -0.178 -1.469 -20.973 1 69.48 ? C16 OL3 201 A 1 HETATM 48 C C17 OL3 . . . B 2 0.87 -1.146 -22.061 1 64.89 ? C17 OL3 201 A 1 HETATM 49 O O10 OL3 . . . B 2 0.09 -2.573 -20.126 1 57.13 ? O10 OL3 201 A 1 HETATM 50 O O15 OL3 . . . B 2 -4.047 -0.576 -16.022 1 50.1 ? O15 OL3 201 A 1 HETATM 51 O O06 OL3 . . . B 2 -2.493 -2.893 -20.122 1 48.48 ? O06 OL3 201 A 1 HETATM 52 CO CO2 OL3 . . . B 2 -3.936 -3.81 -19.034 1 50.12 ? CO2 OL3 201 A 1 HETATM 53 O O09 OL3 . . . B 2 -3.521 -5.876 -19.602 1 44.51 ? O09 OL3 201 A 1 HETATM 54 O O08 OL3 . . . B 2 -0.693 -5.03 -19.64 1 44.68 ? O08 OL3 201 A 1 HETATM 55 N N05 OL3 . . . B 2 -5.764 -3.13 -20.3 1 58.08 ? N05 OL3 201 A 1 HETATM 56 C C32 OL3 . . . B 2 -5.91 -1.805 -20.623 1 64.01 ? C32 OL3 201 A 1 HETATM 57 C C33 OL3 . . . B 2 -6.985 -1.289 -21.376 1 72 ? C33 OL3 201 A 1 HETATM 58 C C26 OL3 . . . B 2 -7.985 -2.183 -21.791 1 71.26 ? C26 OL3 201 A 1 HETATM 59 C C25 OL3 . . . B 2 -7.851 -3.542 -21.45 1 63.23 ? C25 OL3 201 A 1 HETATM 60 C C24 OL3 . . . B 2 -6.739 -3.989 -20.695 1 63.93 ? C24 OL3 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 60 #