data_6AUH # _model_server_result.job_id 8OGMQRn264x3em2uwRhEuQ _model_server_result.datetime_utc '2024-11-28 10:02:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6auh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AUH # _exptl.entry_id 6AUH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 960.469 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-biotin-C-Co4(mu3-O)4(OAc)(Py)3(H2O)3-beta-alanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AUH _cell.length_a 57.701 _cell.length_b 57.701 _cell.length_c 183.768 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H40 Co4 N6 O13 S' _chem_comp.formula_weight 960.469 _chem_comp.id OL5 _chem_comp.mon_nstd_flag . _chem_comp.name N-biotin-C-Co4(mu3-O)4(OAc)(Py)3(H2O)3-beta-alanine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O04 C13 OL5 doub 224 n n C13 N03 OL5 sing 225 n n C13 N02 OL5 sing 226 n n N03 C11 OL5 sing 227 n n C11 C10 OL5 sing 228 n n C11 C12 OL5 sing 229 n n C10 S01 OL5 sing 230 n n S01 C09 OL5 sing 231 n n N02 C12 OL5 sing 232 n n C12 C09 OL5 sing 233 n n C09 C08 OL5 sing 234 n n C08 C07 OL5 sing 235 n n C07 C06 OL5 sing 236 n n C06 C05 OL5 sing 237 n n C05 C01 OL5 sing 238 n n C01 O01 OL5 doub 239 n n C01 N01 OL5 sing 240 n n N01 C02 OL5 sing 241 n n C02 C37 OL5 sing 242 n n C37 C04 OL5 sing 243 n n C04 O14 OL5 sing 244 n n C04 O03 OL5 sing 245 n n O14 CO2 OL5 sing 246 n n O03 CO4 OL5 sing 247 n n CO4 O05 OL5 sing 248 n n CO4 O07 OL5 sing 249 n n CO4 N07 OL5 sing 250 n n CO4 O12 OL5 sing 251 n n CO4 O15 OL5 sing 252 n n O05 CO1 OL5 sing 253 n n O05 CO2 OL5 sing 254 n n O07 CO1 OL5 sing 255 n n O07 CO3 OL5 sing 256 n n N07 C44 OL5 doub 257 n y N07 C40 OL5 sing 258 n y C44 C43 OL5 sing 259 n y C43 C42 OL5 doub 260 n y C42 C41 OL5 sing 261 n y C41 C40 OL5 doub 262 n y CO1 O10 OL5 sing 263 n n CO1 O06 OL5 sing 264 n n CO1 O08 OL5 sing 265 n n O12 CO3 OL5 sing 266 n n O12 CO2 OL5 sing 267 n n CO3 N06 OL5 sing 268 n n CO3 O11 OL5 sing 269 n n CO3 O06 OL5 sing 270 n n N06 C34 OL5 doub 271 n y N06 C28 OL5 sing 272 n y C34 C35 OL5 sing 273 n y C35 C30 OL5 doub 274 n y C30 C29 OL5 sing 275 n y C29 C28 OL5 doub 276 n y O11 C16 OL5 sing 277 n n C16 C17 OL5 sing 278 n n C16 O10 OL5 sing 279 n n O06 CO2 OL5 sing 280 n n CO2 O09 OL5 sing 281 n n CO2 N05 OL5 sing 282 n n N05 C32 OL5 doub 283 n y N05 C24 OL5 sing 284 n y C32 C33 OL5 sing 285 n y C33 C26 OL5 doub 286 n y C26 C25 OL5 sing 287 n y C25 C24 OL5 doub 288 n y N03 H1 OL5 sing 289 n n C11 H2 OL5 sing 290 n n C10 H3 OL5 sing 291 n n C10 H4 OL5 sing 292 n n N02 H5 OL5 sing 293 n n C12 H6 OL5 sing 294 n n C09 H7 OL5 sing 295 n n C08 H8 OL5 sing 296 n n C08 H9 OL5 sing 297 n n C07 H10 OL5 sing 298 n n C07 H11 OL5 sing 299 n n C06 H12 OL5 sing 300 n n C06 H13 OL5 sing 301 n n C05 H14 OL5 sing 302 n n C05 H15 OL5 sing 303 n n N01 H16 OL5 sing 304 n n C02 H17 OL5 sing 305 n n C02 H18 OL5 sing 306 n n C37 H19 OL5 sing 307 n n C37 H20 OL5 sing 308 n n C04 H21 OL5 sing 309 n n C44 H22 OL5 sing 310 n n C43 H23 OL5 sing 311 n n C42 H24 OL5 sing 312 n n C41 H25 OL5 sing 313 n n C40 H26 OL5 sing 314 n n C34 H27 OL5 sing 315 n n C35 H28 OL5 sing 316 n n C30 H29 OL5 sing 317 n n C29 H30 OL5 sing 318 n n C28 H31 OL5 sing 319 n n C16 H32 OL5 sing 320 n n C17 H33 OL5 sing 321 n n C17 H34 OL5 sing 322 n n C17 H35 OL5 sing 323 n n C32 H39 OL5 sing 324 n n C33 H40 OL5 sing 325 n n C26 H41 OL5 sing 326 n n C25 H42 OL5 sing 327 n n C24 H43 OL5 sing 328 n n # _atom_sites.entry_id 6AUH _atom_sites.fract_transf_matrix[1][1] 0.017331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OL5 A 1 201 1 OL5 OL5 . C 3 HOH A 1 301 3 HOH HOH . C 3 HOH A 2 302 48 HOH HOH . C 3 HOH A 3 303 12 HOH HOH . C 3 HOH A 4 304 49 HOH HOH . C 3 HOH A 5 305 8 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 35 HOH HOH . C 3 HOH A 8 308 19 HOH HOH . C 3 HOH A 9 309 31 HOH HOH . C 3 HOH A 10 310 2 HOH HOH . C 3 HOH A 11 311 5 HOH HOH . C 3 HOH A 12 312 51 HOH HOH . C 3 HOH A 13 313 29 HOH HOH . C 3 HOH A 14 314 20 HOH HOH . C 3 HOH A 15 315 47 HOH HOH . C 3 HOH A 16 316 9 HOH HOH . C 3 HOH A 17 317 11 HOH HOH . C 3 HOH A 18 318 61 HOH HOH . C 3 HOH A 19 319 18 HOH HOH . C 3 HOH A 20 320 46 HOH HOH . C 3 HOH A 21 321 15 HOH HOH . C 3 HOH A 22 322 4 HOH HOH . C 3 HOH A 23 323 26 HOH HOH . C 3 HOH A 24 324 37 HOH HOH . C 3 HOH A 25 325 42 HOH HOH . C 3 HOH A 26 326 14 HOH HOH . C 3 HOH A 27 327 41 HOH HOH . C 3 HOH A 28 328 25 HOH HOH . C 3 HOH A 29 329 13 HOH HOH . C 3 HOH A 30 330 16 HOH HOH . C 3 HOH A 31 331 1 HOH HOH . C 3 HOH A 32 332 67 HOH HOH . C 3 HOH A 33 333 63 HOH HOH . C 3 HOH A 34 334 33 HOH HOH . C 3 HOH A 35 335 65 HOH HOH . C 3 HOH A 36 336 10 HOH HOH . C 3 HOH A 37 337 38 HOH HOH . C 3 HOH A 38 338 30 HOH HOH . C 3 HOH A 39 339 54 HOH HOH . C 3 HOH A 40 340 24 HOH HOH . C 3 HOH A 41 341 17 HOH HOH . C 3 HOH A 42 342 21 HOH HOH . C 3 HOH A 43 343 58 HOH HOH . C 3 HOH A 44 344 27 HOH HOH . C 3 HOH A 45 345 43 HOH HOH . C 3 HOH A 46 346 59 HOH HOH . C 3 HOH A 47 347 22 HOH HOH . C 3 HOH A 48 348 50 HOH HOH . C 3 HOH A 49 349 57 HOH HOH . C 3 HOH A 50 350 56 HOH HOH . C 3 HOH A 51 351 28 HOH HOH . C 3 HOH A 52 352 64 HOH HOH . C 3 HOH A 53 353 36 HOH HOH . C 3 HOH A 54 354 7 HOH HOH . C 3 HOH A 55 355 45 HOH HOH . C 3 HOH A 56 356 55 HOH HOH . C 3 HOH A 57 357 23 HOH HOH . C 3 HOH A 58 358 52 HOH HOH . C 3 HOH A 59 359 66 HOH HOH . C 3 HOH A 60 360 44 HOH HOH . C 3 HOH A 61 361 60 HOH HOH . C 3 HOH A 62 362 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O04 OL5 . . . B 2 -14.517 0.592 -8.217 0.8 12.11 ? O04 OL5 201 A 1 HETATM 2 C C13 OL5 . . . B 2 -13.283 0.521 -8.476 0.8 9.84 ? C13 OL5 201 A 1 HETATM 3 N N03 OL5 . . . B 2 -12.361 0.693 -7.513 0.8 10.55 ? N03 OL5 201 A 1 HETATM 4 C C11 OL5 . . . B 2 -11.043 0.623 -8.111 0.8 10.67 ? C11 OL5 201 A 1 HETATM 5 C C10 OL5 . . . B 2 -10.31 -0.628 -7.65 0.8 12.95 ? C10 OL5 201 A 1 HETATM 6 S S01 OL5 . . . B 2 -10.862 -2.043 -8.598 0.8 11.65 ? S01 OL5 201 A 1 HETATM 7 N N02 OL5 . . . B 2 -12.808 0.336 -9.704 0.8 10.17 ? N02 OL5 201 A 1 HETATM 8 C C12 OL5 . . . B 2 -11.323 0.364 -9.659 0.8 10.07 ? C12 OL5 201 A 1 HETATM 9 C C09 OL5 . . . B 2 -10.725 -1.007 -10.04 0.8 10.93 ? C09 OL5 201 A 1 HETATM 10 C C08 OL5 . . . B 2 -11.302 -1.659 -11.3 0.8 10.84 ? C08 OL5 201 A 1 HETATM 11 C C07 OL5 . . . B 2 -10.492 -2.816 -11.887 0.8 12.35 ? C07 OL5 201 A 1 HETATM 12 C C06 OL5 . . . B 2 -11.166 -3.44 -13.138 0.8 13.54 ? C06 OL5 201 A 1 HETATM 13 C C05 OL5 . . . B 2 -10.339 -4.568 -13.749 0.8 13.46 ? C05 OL5 201 A 1 HETATM 14 C C01 OL5 . . . B 2 -9.014 -4.023 -14.313 0.8 12.31 ? C01 OL5 201 A 1 HETATM 15 O O01 OL5 . . . B 2 -8.979 -2.929 -14.951 0.8 14.73 ? O01 OL5 201 A 1 HETATM 16 N N01 OL5 . . . B 2 -7.949 -4.733 -14.068 0.8 14.66 ? N01 OL5 201 A 1 HETATM 17 C C02 OL5 . . . B 2 -6.654 -4.26 -14.528 0.8 19.78 ? C02 OL5 201 A 1 HETATM 18 C C37 OL5 . . . B 2 -6.456 -4.936 -15.854 0.8 25.87 ? C37 OL5 201 A 1 HETATM 19 C C04 OL5 . . . B 2 -5.379 -4.279 -16.607 0.8 39.74 ? C04 OL5 201 A 1 HETATM 20 O O14 OL5 . . . B 2 -5.28 -4.659 -17.86 0.8 41.84 ? O14 OL5 201 A 1 HETATM 21 O O03 OL5 . . . B 2 -4.646 -3.339 -16.021 0.8 39.72 ? O03 OL5 201 A 1 HETATM 22 CO CO4 OL5 . . . B 2 -3.171 -2.318 -16.878 0.8 43.05 ? CO4 OL5 201 A 1 HETATM 23 O O05 OL5 . . . B 2 -2.537 -3.95 -17.39 0.8 41.09 ? O05 OL5 201 A 1 HETATM 24 O O07 OL5 . . . B 2 -1.721 -1.466 -17.795 0.8 42.31 ? O07 OL5 201 A 1 HETATM 25 N N07 OL5 . . . B 2 -1.857 -2.766 -15.106 0.8 43.44 ? N07 OL5 201 A 1 HETATM 26 C C44 OL5 . . . B 2 -2.126 -3.848 -14.331 0.8 44.84 ? C44 OL5 201 A 1 HETATM 27 C C43 OL5 . . . B 2 -1.296 -4.058 -13.209 0.8 48.34 ? C43 OL5 201 A 1 HETATM 28 C C42 OL5 . . . B 2 -0.284 -3.122 -12.934 0.8 43.28 ? C42 OL5 201 A 1 HETATM 29 C C41 OL5 . . . B 2 -0.141 -2.07 -13.709 0.8 50.88 ? C41 OL5 201 A 1 HETATM 30 C C40 OL5 . . . B 2 -0.909 -1.861 -14.753 0.8 50.03 ? C40 OL5 201 A 1 HETATM 31 CO CO1 OL5 . . . B 2 -1.251 -3.27 -18.513 0.8 47.74 ? CO1 OL5 201 A 1 HETATM 32 O O12 OL5 . . . B 2 -4.413 -1.803 -18.317 0.8 32.4 ? O12 OL5 201 A 1 HETATM 33 CO CO3 OL5 . . . B 2 -2.95 -1.237 -19.239 0.8 50.93 ? CO3 OL5 201 A 1 HETATM 34 N N06 OL5 . . . B 2 -4.343 -0.821 -20.785 0.8 49.18 ? N06 OL5 201 A 1 HETATM 35 C C34 OL5 . . . B 2 -4.063 -0.962 -22.104 0.8 53.35 ? C34 OL5 201 A 1 HETATM 36 C C35 OL5 . . . B 2 -4.975 -0.661 -23.004 0.8 50.25 ? C35 OL5 201 A 1 HETATM 37 C C30 OL5 . . . B 2 -6.143 -0.182 -22.671 0.8 50.16 ? C30 OL5 201 A 1 HETATM 38 C C29 OL5 . . . B 2 -6.496 0.036 -21.317 0.8 52.75 ? C29 OL5 201 A 1 HETATM 39 C C28 OL5 . . . B 2 -5.53 -0.284 -20.344 0.8 50.82 ? C28 OL5 201 A 1 HETATM 40 O O11 OL5 . . . B 2 -1.279 -0.814 -20.399 0.8 47.11 ? O11 OL5 201 A 1 HETATM 41 C C16 OL5 . . . B 2 -0.064 -1.6 -20.569 0.8 50.75 ? C16 OL5 201 A 1 HETATM 42 C C17 OL5 . . . B 2 1.109 -1.314 -21.516 0.8 48.03 ? C17 OL5 201 A 1 HETATM 43 O O10 OL5 . . . B 2 0.137 -2.73 -19.779 0.8 47.49 ? O10 OL5 201 A 1 HETATM 44 O O15 OL5 . . . B 2 -3.838 -0.622 -16.294 0.8 38.36 ? O15 OL5 201 A 1 HETATM 45 O O06 OL5 . . . B 2 -2.429 -2.753 -19.998 0.8 40.84 ? O06 OL5 201 A 1 HETATM 46 CO CO2 OL5 . . . B 2 -3.854 -3.757 -18.932 0.8 43.79 ? CO2 OL5 201 A 1 HETATM 47 O O09 OL5 . . . B 2 -3.365 -5.649 -19.539 0.8 43.23 ? O09 OL5 201 A 1 HETATM 48 O O08 OL5 . . . B 2 -0.868 -5.067 -19.307 0.8 41.99 ? O08 OL5 201 A 1 HETATM 49 N N05 OL5 . . . B 2 -5.175 -3.677 -20.381 0.8 46.06 ? N05 OL5 201 A 1 HETATM 50 C C32 OL5 . . . B 2 -6.436 -3.274 -20.029 0.8 44.53 ? C32 OL5 201 A 1 HETATM 51 C C33 OL5 . . . B 2 -7.451 -3.212 -21 0.8 45.66 ? C33 OL5 201 A 1 HETATM 52 C C26 OL5 . . . B 2 -7.144 -3.611 -22.306 0.8 53.21 ? C26 OL5 201 A 1 HETATM 53 C C25 OL5 . . . B 2 -5.837 -4.037 -22.624 0.8 52.58 ? C25 OL5 201 A 1 HETATM 54 C C24 OL5 . . . B 2 -4.836 -4.087 -21.632 0.8 52.97 ? C24 OL5 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 54 #