data_6AX9 # _model_server_result.job_id ycaBTRxrmERr8yzoM6ZMyw _model_server_result.datetime_utc '2024-11-26 20:30:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ax9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 6AX9 # _exptl.entry_id 6AX9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.32 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-benzyl-N,N-diethylethanaminium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.95 _cell.angle_gamma 90 _cell.entry_id 6AX9 _cell.length_a 52.851 _cell.length_b 47.18 _cell.length_c 75.49 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AX9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 120 A ASP 99 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc2 A OD2 ASP 120 A ASP 99 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc3 A OD1 ASN 261 A ASN 240 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc4 A OG SER 265 A SER 244 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc5 A OE2 GLU 269 A GLU 248 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc6 B MG MG . A MG 401 1_555 E O3 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc7 B MG MG . A MG 401 1_555 G O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc8 B MG MG . A MG 401 1_555 G O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc9 B MG MG . A MG 401 1_555 G O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc10 B MG MG . A MG 401 1_555 G O HOH . A HOH 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc11 C MG MG . A MG 402 1_555 E O3 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc12 C MG MG . A MG 402 1_555 E O6 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc13 C MG MG . A MG 402 1_555 G O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc14 C MG MG . A MG 402 1_555 G O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc15 C MG MG . A MG 402 1_555 G O HOH . A HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc16 D MG MG . A MG 403 1_555 E O POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc17 D MG MG . A MG 403 1_555 E O1 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc18 D MG MG . A MG 403 1_555 E O4 POP . A POP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc19 D MG MG . A MG 403 1_555 G O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? # _chem_comp.formula 'C13 H22 N 1' _chem_comp.formula_weight 192.32 _chem_comp.id BTM _chem_comp.mon_nstd_flag . _chem_comp.name N-benzyl-N,N-diethylethanaminium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 BTM sing 70 n n N C2 BTM sing 71 n n N C4 BTM sing 72 n n N C6 BTM sing 73 n n C1 C8 BTM sing 74 n n C2 C3 BTM sing 75 n n C4 C5 BTM sing 76 n n C6 C7 BTM sing 77 n n C8 C9 BTM doub 78 n y C8 C13 BTM sing 79 n y C9 C10 BTM sing 80 n y C10 C11 BTM doub 81 n y C11 C12 BTM sing 82 n y C12 C13 BTM doub 83 n y C1 H1 BTM sing 84 n n C1 H1A BTM sing 85 n n C2 H2 BTM sing 86 n n C2 H2A BTM sing 87 n n C3 H3 BTM sing 88 n n C3 H3A BTM sing 89 n n C3 H3B BTM sing 90 n n C4 H4 BTM sing 91 n n C4 H4A BTM sing 92 n n C5 H5 BTM sing 93 n n C5 H5A BTM sing 94 n n C5 H5B BTM sing 95 n n C6 H6 BTM sing 96 n n C6 H6A BTM sing 97 n n C7 H7 BTM sing 98 n n C7 H7A BTM sing 99 n n C7 H7B BTM sing 100 n n C9 H9 BTM sing 101 n n C10 H10 BTM sing 102 n n C11 H11 BTM sing 103 n n C12 H12 BTM sing 104 n n C13 H13 BTM sing 105 n n # _atom_sites.entry_id 6AX9 _atom_sites.fract_transf_matrix[1][1] 0.018921 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001972 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 1 MG MG . C 2 MG A 1 402 1 MG MG . D 2 MG A 1 403 1 MG MG . E 3 POP A 1 404 703 POP POP . F 4 BTM A 1 405 1 BTM LIG . G 5 HOH A 1 501 46 HOH HOH . G 5 HOH A 2 502 34 HOH HOH . G 5 HOH A 3 503 38 HOH HOH . G 5 HOH A 4 504 45 HOH HOH . G 5 HOH A 5 505 7 HOH HOH . G 5 HOH A 6 506 49 HOH HOH . G 5 HOH A 7 507 44 HOH HOH . G 5 HOH A 8 508 40 HOH HOH . G 5 HOH A 9 509 25 HOH HOH . G 5 HOH A 10 510 9 HOH HOH . G 5 HOH A 11 511 3 HOH HOH . G 5 HOH A 12 512 47 HOH HOH . G 5 HOH A 13 513 41 HOH HOH . G 5 HOH A 14 514 43 HOH HOH . G 5 HOH A 15 515 33 HOH HOH . G 5 HOH A 16 516 30 HOH HOH . G 5 HOH A 17 517 39 HOH HOH . G 5 HOH A 18 518 50 HOH HOH . G 5 HOH A 19 519 8 HOH HOH . G 5 HOH A 20 520 32 HOH HOH . G 5 HOH A 21 521 22 HOH HOH . G 5 HOH A 22 522 37 HOH HOH . G 5 HOH A 23 523 1 HOH HOH . G 5 HOH A 24 524 42 HOH HOH . G 5 HOH A 25 525 48 HOH HOH . G 5 HOH A 26 526 13 HOH HOH . G 5 HOH A 27 527 10 HOH HOH . G 5 HOH A 28 528 18 HOH HOH . G 5 HOH A 29 529 23 HOH HOH . G 5 HOH A 30 530 52 HOH HOH . G 5 HOH A 31 531 2 HOH HOH . G 5 HOH A 32 532 19 HOH HOH . G 5 HOH A 33 533 27 HOH HOH . G 5 HOH A 34 534 6 HOH HOH . G 5 HOH A 35 535 15 HOH HOH . G 5 HOH A 36 536 5 HOH HOH . G 5 HOH A 37 537 53 HOH HOH . G 5 HOH A 38 538 31 HOH HOH . G 5 HOH A 39 539 28 HOH HOH . G 5 HOH A 40 540 51 HOH HOH . G 5 HOH A 41 541 12 HOH HOH . G 5 HOH A 42 542 4 HOH HOH . G 5 HOH A 43 543 11 HOH HOH . G 5 HOH A 44 544 35 HOH HOH . G 5 HOH A 45 545 36 HOH HOH . G 5 HOH A 46 546 14 HOH HOH . G 5 HOH A 47 547 54 HOH HOH . G 5 HOH A 48 548 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N BTM . . . F 4 9.797 -1.02 -20.976 0.8 36.68 1 N BTM 405 A 1 HETATM 2 C C1 BTM . . . F 4 10.096 -2.137 -19.988 0.8 31.88 ? C1 BTM 405 A 1 HETATM 3 C C2 BTM . . . F 4 10.925 -0.116 -20.963 0.8 33.25 ? C2 BTM 405 A 1 HETATM 4 C C3 BTM . . . F 4 12.091 -0.698 -21.795 0.8 22.08 ? C3 BTM 405 A 1 HETATM 5 C C4 BTM . . . F 4 9.743 -1.497 -22.367 0.8 31.9 ? C4 BTM 405 A 1 HETATM 6 C C5 BTM . . . F 4 9.039 -0.47 -23.278 0.8 31.96 ? C5 BTM 405 A 1 HETATM 7 C C6 BTM . . . F 4 8.498 -0.399 -20.692 0.8 28.22 ? C6 BTM 405 A 1 HETATM 8 C C7 BTM . . . F 4 8.596 0.913 -19.963 0.8 38.62 ? C7 BTM 405 A 1 HETATM 9 C C8 BTM . . . F 4 9.583 -1.929 -18.506 0.8 34.12 ? C8 BTM 405 A 1 HETATM 10 C C9 BTM . . . F 4 8.35 -2.45 -18.072 0.8 35.14 ? C9 BTM 405 A 1 HETATM 11 C C10 BTM . . . F 4 7.915 -2.259 -16.76 0.8 31.31 ? C10 BTM 405 A 1 HETATM 12 C C11 BTM . . . F 4 8.732 -1.535 -15.848 0.8 36.82 ? C11 BTM 405 A 1 HETATM 13 C C12 BTM . . . F 4 9.96 -1.027 -16.258 0.8 30.71 ? C12 BTM 405 A 1 HETATM 14 C C13 BTM . . . F 4 10.389 -1.229 -17.577 0.8 33.28 ? C13 BTM 405 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #