data_6AY5
#
_model_server_result.job_id            hnPnwuZIsNKptWcLswbcEg 
_model_server_result.datetime_utc      '2024-11-23 12:23:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ay5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1205}' 
#
_entry.id    6AY5 
#
_exptl.entry_id    6AY5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6AY5 
_cell.length_a            34.435 
_cell.length_b            49.232 
_cell.length_c            80.965 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AY5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 192 n n 
C1 C2 GOL sing 193 n n 
C1 H11 GOL sing 194 n n 
C1 H12 GOL sing 195 n n 
O1 HO1 GOL sing 196 n n 
C2 O2 GOL sing 197 n n 
C2 C3 GOL sing 198 n n 
C2 H2 GOL sing 199 n n 
O2 HO2 GOL sing 200 n n 
C3 O3 GOL sing 201 n n 
C3 H31 GOL sing 202 n n 
C3 H32 GOL sing 203 n n 
O3 HO3 GOL sing 204 n n 
#
_atom_sites.entry_id                     6AY5 
_atom_sites.fract_transf_matrix[1][1]    0.02904 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020312 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012351 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 C3V A 1 1201 1 C3V DRG . 
C 3 SO4 A 1 1202 1 SO4 SO4 . 
D 3 SO4 A 1 1203 2 SO4 SO4 . 
E 4 DMS A 1 1204 3 DMS DMS . 
F 5 GOL A 1 1205 4 GOL GOL . 
G 6 HOH A 1 1301 69 HOH HOH . 
G 6 HOH A 2 1302 86 HOH HOH . 
G 6 HOH A 3 1303 132 HOH HOH . 
G 6 HOH A 4 1304 116 HOH HOH . 
G 6 HOH A 5 1305 113 HOH HOH . 
G 6 HOH A 6 1306 147 HOH HOH . 
G 6 HOH A 7 1307 67 HOH HOH . 
G 6 HOH A 8 1308 57 HOH HOH . 
G 6 HOH A 9 1309 100 HOH HOH . 
G 6 HOH A 10 1310 1 HOH HOH . 
G 6 HOH A 11 1311 51 HOH HOH . 
G 6 HOH A 12 1312 63 HOH HOH . 
G 6 HOH A 13 1313 81 HOH HOH . 
G 6 HOH A 14 1314 93 HOH HOH . 
G 6 HOH A 15 1315 83 HOH HOH . 
G 6 HOH A 16 1316 19 HOH HOH . 
G 6 HOH A 17 1317 13 HOH HOH . 
G 6 HOH A 18 1318 152 HOH HOH . 
G 6 HOH A 19 1319 3 HOH HOH . 
G 6 HOH A 20 1320 135 HOH HOH . 
G 6 HOH A 21 1321 20 HOH HOH . 
G 6 HOH A 22 1322 59 HOH HOH . 
G 6 HOH A 23 1323 30 HOH HOH . 
G 6 HOH A 24 1324 14 HOH HOH . 
G 6 HOH A 25 1325 109 HOH HOH . 
G 6 HOH A 26 1326 74 HOH HOH . 
G 6 HOH A 27 1327 22 HOH HOH . 
G 6 HOH A 28 1328 35 HOH HOH . 
G 6 HOH A 29 1329 127 HOH HOH . 
G 6 HOH A 30 1330 54 HOH HOH . 
G 6 HOH A 31 1331 7 HOH HOH . 
G 6 HOH A 32 1332 96 HOH HOH . 
G 6 HOH A 33 1333 6 HOH HOH . 
G 6 HOH A 34 1334 56 HOH HOH . 
G 6 HOH A 35 1335 24 HOH HOH . 
G 6 HOH A 36 1336 151 HOH HOH . 
G 6 HOH A 37 1337 73 HOH HOH . 
G 6 HOH A 38 1338 12 HOH HOH . 
G 6 HOH A 39 1339 9 HOH HOH . 
G 6 HOH A 40 1340 65 HOH HOH . 
G 6 HOH A 41 1341 41 HOH HOH . 
G 6 HOH A 42 1342 71 HOH HOH . 
G 6 HOH A 43 1343 42 HOH HOH . 
G 6 HOH A 44 1344 21 HOH HOH . 
G 6 HOH A 45 1345 143 HOH HOH . 
G 6 HOH A 46 1346 46 HOH HOH . 
G 6 HOH A 47 1347 121 HOH HOH . 
G 6 HOH A 48 1348 44 HOH HOH . 
G 6 HOH A 49 1349 156 HOH HOH . 
G 6 HOH A 50 1350 5 HOH HOH . 
G 6 HOH A 51 1351 101 HOH HOH . 
G 6 HOH A 52 1352 2 HOH HOH . 
G 6 HOH A 53 1353 48 HOH HOH . 
G 6 HOH A 54 1354 38 HOH HOH . 
G 6 HOH A 55 1355 33 HOH HOH . 
G 6 HOH A 56 1356 134 HOH HOH . 
G 6 HOH A 57 1357 50 HOH HOH . 
G 6 HOH A 58 1358 138 HOH HOH . 
G 6 HOH A 59 1359 39 HOH HOH . 
G 6 HOH A 60 1360 43 HOH HOH . 
G 6 HOH A 61 1361 87 HOH HOH . 
G 6 HOH A 62 1362 49 HOH HOH . 
G 6 HOH A 63 1363 10 HOH HOH . 
G 6 HOH A 64 1364 27 HOH HOH . 
G 6 HOH A 65 1365 79 HOH HOH . 
G 6 HOH A 66 1366 4 HOH HOH . 
G 6 HOH A 67 1367 146 HOH HOH . 
G 6 HOH A 68 1368 128 HOH HOH . 
G 6 HOH A 69 1369 111 HOH HOH . 
G 6 HOH A 70 1370 28 HOH HOH . 
G 6 HOH A 71 1371 120 HOH HOH . 
G 6 HOH A 72 1372 16 HOH HOH . 
G 6 HOH A 73 1373 18 HOH HOH . 
G 6 HOH A 74 1374 37 HOH HOH . 
G 6 HOH A 75 1375 15 HOH HOH . 
G 6 HOH A 76 1376 25 HOH HOH . 
G 6 HOH A 77 1377 52 HOH HOH . 
G 6 HOH A 78 1378 31 HOH HOH . 
G 6 HOH A 79 1379 62 HOH HOH . 
G 6 HOH A 80 1380 154 HOH HOH . 
G 6 HOH A 81 1381 17 HOH HOH . 
G 6 HOH A 82 1382 72 HOH HOH . 
G 6 HOH A 83 1383 23 HOH HOH . 
G 6 HOH A 84 1384 58 HOH HOH . 
G 6 HOH A 85 1385 148 HOH HOH . 
G 6 HOH A 86 1386 98 HOH HOH . 
G 6 HOH A 87 1387 123 HOH HOH . 
G 6 HOH A 88 1388 68 HOH HOH . 
G 6 HOH A 89 1389 32 HOH HOH . 
G 6 HOH A 90 1390 45 HOH HOH . 
G 6 HOH A 91 1391 11 HOH HOH . 
G 6 HOH A 92 1392 92 HOH HOH . 
G 6 HOH A 93 1393 150 HOH HOH . 
G 6 HOH A 94 1394 26 HOH HOH . 
G 6 HOH A 95 1395 144 HOH HOH . 
G 6 HOH A 96 1396 140 HOH HOH . 
G 6 HOH A 97 1397 55 HOH HOH . 
G 6 HOH A 98 1398 53 HOH HOH . 
G 6 HOH A 99 1399 88 HOH HOH . 
G 6 HOH A 100 1400 84 HOH HOH . 
G 6 HOH A 101 1401 8 HOH HOH . 
G 6 HOH A 102 1402 60 HOH HOH . 
G 6 HOH A 103 1403 102 HOH HOH . 
G 6 HOH A 104 1404 145 HOH HOH . 
G 6 HOH A 105 1405 114 HOH HOH . 
G 6 HOH A 106 1406 126 HOH HOH . 
G 6 HOH A 107 1407 70 HOH HOH . 
G 6 HOH A 108 1408 76 HOH HOH . 
G 6 HOH A 109 1409 136 HOH HOH . 
G 6 HOH A 110 1410 141 HOH HOH . 
G 6 HOH A 111 1411 108 HOH HOH . 
G 6 HOH A 112 1412 149 HOH HOH . 
G 6 HOH A 113 1413 115 HOH HOH . 
G 6 HOH A 114 1414 131 HOH HOH . 
G 6 HOH A 115 1415 61 HOH HOH . 
G 6 HOH A 116 1416 85 HOH HOH . 
G 6 HOH A 117 1417 106 HOH HOH . 
G 6 HOH A 118 1418 29 HOH HOH . 
G 6 HOH A 119 1419 110 HOH HOH . 
G 6 HOH A 120 1420 117 HOH HOH . 
G 6 HOH A 121 1421 105 HOH HOH . 
G 6 HOH A 122 1422 82 HOH HOH . 
G 6 HOH A 123 1423 155 HOH HOH . 
G 6 HOH A 124 1424 139 HOH HOH . 
G 6 HOH A 125 1425 97 HOH HOH . 
G 6 HOH A 126 1426 133 HOH HOH . 
G 6 HOH A 127 1427 47 HOH HOH . 
G 6 HOH A 128 1428 36 HOH HOH . 
G 6 HOH A 129 1429 89 HOH HOH . 
G 6 HOH A 130 1430 34 HOH HOH . 
G 6 HOH A 131 1431 107 HOH HOH . 
G 6 HOH A 132 1432 104 HOH HOH . 
G 6 HOH A 133 1433 153 HOH HOH . 
G 6 HOH A 134 1434 94 HOH HOH . 
G 6 HOH A 135 1435 77 HOH HOH . 
G 6 HOH A 136 1436 99 HOH HOH . 
G 6 HOH A 137 1437 90 HOH HOH . 
G 6 HOH A 138 1438 129 HOH HOH . 
G 6 HOH A 139 1439 124 HOH HOH . 
G 6 HOH A 140 1440 125 HOH HOH . 
G 6 HOH A 141 1441 40 HOH HOH . 
G 6 HOH A 142 1442 66 HOH HOH . 
G 6 HOH A 143 1443 122 HOH HOH . 
G 6 HOH A 144 1444 80 HOH HOH . 
G 6 HOH A 145 1445 78 HOH HOH . 
G 6 HOH A 146 1446 103 HOH HOH . 
G 6 HOH A 147 1447 119 HOH HOH . 
G 6 HOH A 148 1448 142 HOH HOH . 
G 6 HOH A 149 1449 64 HOH HOH . 
G 6 HOH A 150 1450 112 HOH HOH . 
G 6 HOH A 151 1451 130 HOH HOH . 
G 6 HOH A 152 1452 95 HOH HOH . 
G 6 HOH A 153 1453 75 HOH HOH . 
G 6 HOH A 154 1454 137 HOH HOH . 
G 6 HOH A 155 1455 91 HOH HOH . 
G 6 HOH A 156 1456 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 5 -2.865 3.408 -4.364 0.56 33.51 ? C1 GOL 1205 A 1 
HETATM 2 O O1 GOL . . . F 5 -3.417 3.654 -5.651 0.56 33.34 ? O1 GOL 1205 A 1 
HETATM 3 C C2 GOL . . . F 5 -3.777 2.42 -3.535 0.56 33.58 ? C2 GOL 1205 A 1 
HETATM 4 O O2 GOL . . . F 5 -4.233 2.976 -2.314 0.56 33.98 ? O2 GOL 1205 A 1 
HETATM 5 C C3 GOL . . . F 5 -2.851 1.222 -3.248 0.56 33.47 ? C3 GOL 1205 A 1 
HETATM 6 O O3 GOL . . . F 5 -3.431 0.539 -2.171 0.56 33.69 ? O3 GOL 1205 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#