data_6AY6 # _model_server_result.job_id rqevG9FOSDmHyeptRkHJjw _model_server_result.datetime_utc '2024-11-29 21:59:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ay6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6AY6 # _exptl.entry_id 6AY6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.31 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Voriconazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.8 _cell.angle_gamma 90 _cell.entry_id 6AY6 _cell.length_a 120.18 _cell.length_b 55.34 _cell.length_c 73.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AY6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 366 A ARG 391 1_555 A N CSO 367 A CSO 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CSO 367 A CSO 392 1_555 A N THR 368 A THR 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A SG CYS 405 A CYS 430 1_555 C FE HEM . A HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc2 B N8 VOR . A VOR 501 1_555 C FE HEM . A HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? # _chem_comp.formula 'C16 H14 F3 N5 O' _chem_comp.formula_weight 349.31 _chem_comp.id VOR _chem_comp.mon_nstd_flag . _chem_comp.name Voriconazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (2R,3S)-2-(2,4-difluorophenyl)-3-(5-fluoropyrimidin-4-yl)-1-(1H-1,2,4-triazol-1-yl)butan-2-ol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C16 VOR sing 472 n n F2 C18 VOR sing 473 n n F3 C22 VOR sing 474 n n O4 C10 VOR sing 475 n n N5 N7 VOR sing 476 n y N5 C12 VOR sing 477 n n N5 C21 VOR sing 478 n y N6 C15 VOR doub 479 n y N6 C24 VOR sing 480 n y N7 C25 VOR doub 481 n y N8 C21 VOR doub 482 n y N8 C25 VOR sing 483 n y N9 C23 VOR sing 484 n y N9 C24 VOR doub 485 n y C10 C11 VOR sing 486 n n C10 C12 VOR sing 487 n n C10 C13 VOR sing 488 n n C11 C14 VOR sing 489 n n C11 C15 VOR sing 490 n n C13 C16 VOR doub 491 n y C13 C17 VOR sing 492 n y C15 C18 VOR sing 493 n y C16 C19 VOR sing 494 n y C17 C20 VOR doub 495 n y C18 C23 VOR doub 496 n y C19 C22 VOR doub 497 n y C20 C22 VOR sing 498 n y O4 HO4 VOR sing 499 n n C11 H11 VOR sing 500 n n C12 H12 VOR sing 501 n n C12 H12A VOR sing 502 n n C14 H14 VOR sing 503 n n C14 H14A VOR sing 504 n n C14 H14B VOR sing 505 n n C17 H17 VOR sing 506 n n C19 H19 VOR sing 507 n n C20 H20 VOR sing 508 n n C21 H21 VOR sing 509 n n C23 H23 VOR sing 510 n n C24 H24 VOR sing 511 n n C25 H25 VOR sing 512 n n # _atom_sites.entry_id 6AY6 _atom_sites.fract_transf_matrix[1][1] 0.008321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001587 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VOR A 1 501 1 VOR VOR . C 3 HEM A 1 502 1 HEM HEM . D 4 HOH A 1 601 8 HOH HOH . D 4 HOH A 2 602 7 HOH HOH . D 4 HOH A 3 603 3 HOH HOH . D 4 HOH A 4 604 2 HOH HOH . D 4 HOH A 5 605 5 HOH HOH . D 4 HOH A 6 606 6 HOH HOH . D 4 HOH A 7 607 9 HOH HOH . D 4 HOH A 8 608 4 HOH HOH . D 4 HOH A 9 609 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F1 VOR . . . B 2 19.264 -6.868 16.903 1 76.73 ? F1 VOR 501 A 1 HETATM 2 F F2 VOR . . . B 2 15.747 -6.369 14.957 1 80.08 ? F2 VOR 501 A 1 HETATM 3 F F3 VOR . . . B 2 22.071 -9.023 20.033 1 76.28 ? F3 VOR 501 A 1 HETATM 4 O O4 VOR . . . B 2 16.22 -6.885 19.79 1 70.23 ? O4 VOR 501 A 1 HETATM 5 N N5 VOR . . . B 2 17.976 -4.483 19.437 1 66.58 ? N5 VOR 501 A 1 HETATM 6 N N6 VOR . . . B 2 14.163 -7.238 18.107 1 75.48 ? N6 VOR 501 A 1 HETATM 7 N N7 VOR . . . B 2 18.983 -3.614 19.028 1 72.09 ? N7 VOR 501 A 1 HETATM 8 N N8 VOR . . . B 2 18.553 -3.376 21.173 1 74.64 ? N8 VOR 501 A 1 HETATM 9 N N9 VOR . . . B 2 12.585 -6.277 16.645 1 65.08 ? N9 VOR 501 A 1 HETATM 10 C C10 VOR . . . B 2 17.121 -6.749 18.701 1 64.59 ? C10 VOR 501 A 1 HETATM 11 C C11 VOR . . . B 2 16.503 -7.528 17.538 1 69.25 ? C11 VOR 501 A 1 HETATM 12 C C12 VOR . . . B 2 17.35 -5.26 18.355 1 65.95 ? C12 VOR 501 A 1 HETATM 13 C C13 VOR . . . B 2 18.42 -7.381 19.072 1 61.11 ? C13 VOR 501 A 1 HETATM 14 C C14 VOR . . . B 2 16.336 -8.982 17.926 1 65.63 ? C14 VOR 501 A 1 HETATM 15 C C15 VOR . . . B 2 15.151 -7.047 17.223 1 69.39 ? C15 VOR 501 A 1 HETATM 16 C C16 VOR . . . B 2 19.491 -7.414 18.088 1 66.52 ? C16 VOR 501 A 1 HETATM 17 C C17 VOR . . . B 2 18.625 -7.931 20.312 1 60.29 ? C17 VOR 501 A 1 HETATM 18 C C18 VOR . . . B 2 14.799 -6.548 15.885 1 73.55 ? C18 VOR 501 A 1 HETATM 19 C C19 VOR . . . B 2 20.735 -7.897 18.44 1 66.49 ? C19 VOR 501 A 1 HETATM 20 C C20 VOR . . . B 2 19.849 -8.503 20.608 1 60.49 ? C20 VOR 501 A 1 HETATM 21 C C21 VOR . . . B 2 17.656 -4.267 20.696 1 72.05 ? C21 VOR 501 A 1 HETATM 22 C C22 VOR . . . B 2 20.895 -8.476 19.693 1 71.64 ? C22 VOR 501 A 1 HETATM 23 C C23 VOR . . . B 2 13.493 -6.143 15.663 1 76.47 ? C23 VOR 501 A 1 HETATM 24 C C24 VOR . . . B 2 12.913 -6.832 17.832 1 70.74 ? C24 VOR 501 A 1 HETATM 25 C C25 VOR . . . B 2 19.36 -2.968 20.149 1 89.78 ? C25 VOR 501 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 380 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #