data_6AZT
#
_model_server_result.job_id            hXC2xDwJql4co01S04VhBA 
_model_server_result.datetime_utc      '2024-11-22 10:08:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6azt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6AZT 
#
_exptl.entry_id    6AZT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6AZT 
_cell.length_a            77.03 
_cell.length_b            77.03 
_cell.length_c            108.171 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6AZT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 253 A CYS 253 1_555 A SG CYS 267 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
covale ? covale1 A C SER 176 A SER 176 1_555 A N SNN 177 A SNN 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? 
covale ? covale2 A C SNN 177 A SNN 177 1_555 A N HIS 178 A HIS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.527 ? 
covale ? covale3 A C5 SNN 177 A SNN 177 1_555 A N HIS 178 A HIS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.583 ? 
covale ? covale4 A SG CYS 220 A CYS 220 1_555 B C CE7 3 B CE7 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.889 ? 
covale ? covale5 B C ALA 2 B ALA 2 1_555 B N CE7 3 B CE7 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 148 n n 
C1 C2 GOL sing 149 n n 
C1 H11 GOL sing 150 n n 
C1 H12 GOL sing 151 n n 
O1 HO1 GOL sing 152 n n 
C2 O2 GOL sing 153 n n 
C2 C3 GOL sing 154 n n 
C2 H2 GOL sing 155 n n 
O2 HO2 GOL sing 156 n n 
C3 O3 GOL sing 157 n n 
C3 H31 GOL sing 158 n n 
C3 H32 GOL sing 159 n n 
O3 HO3 GOL sing 160 n n 
#
_atom_sites.entry_id                     6AZT 
_atom_sites.fract_transf_matrix[1][1]    0.012982 
_atom_sites.fract_transf_matrix[1][2]    0.007495 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01499 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 501 502 GOL GOL . 
D 3 GOL A 1 502 503 GOL GOL . 
E 3 GOL A 1 503 504 GOL GOL . 
F 4 HOH A 1 601 601 HOH HOH . 
F 4 HOH A 2 602 602 HOH HOH . 
F 4 HOH A 3 603 603 HOH HOH . 
F 4 HOH A 4 604 604 HOH HOH . 
F 4 HOH A 5 605 605 HOH HOH . 
F 4 HOH A 6 606 606 HOH HOH . 
F 4 HOH A 7 607 607 HOH HOH . 
F 4 HOH A 8 608 608 HOH HOH . 
F 4 HOH A 9 609 609 HOH HOH . 
F 4 HOH A 10 610 610 HOH HOH . 
F 4 HOH A 11 611 611 HOH HOH . 
F 4 HOH A 12 612 612 HOH HOH . 
F 4 HOH A 13 613 613 HOH HOH . 
F 4 HOH A 14 614 614 HOH HOH . 
F 4 HOH A 15 615 615 HOH HOH . 
F 4 HOH A 16 616 616 HOH HOH . 
F 4 HOH A 17 617 617 HOH HOH . 
F 4 HOH A 18 618 618 HOH HOH . 
F 4 HOH A 19 619 619 HOH HOH . 
F 4 HOH A 20 620 620 HOH HOH . 
F 4 HOH A 21 621 621 HOH HOH . 
F 4 HOH A 22 622 622 HOH HOH . 
F 4 HOH A 23 623 623 HOH HOH . 
F 4 HOH A 24 624 624 HOH HOH . 
F 4 HOH A 25 625 625 HOH HOH . 
F 4 HOH A 26 626 626 HOH HOH . 
F 4 HOH A 27 627 627 HOH HOH . 
F 4 HOH A 28 628 628 HOH HOH . 
F 4 HOH A 29 629 629 HOH HOH . 
F 4 HOH A 30 630 630 HOH HOH . 
F 4 HOH A 31 631 631 HOH HOH . 
F 4 HOH A 32 632 632 HOH HOH . 
F 4 HOH A 33 633 633 HOH HOH . 
F 4 HOH A 34 634 634 HOH HOH . 
F 4 HOH A 35 635 635 HOH HOH . 
F 4 HOH A 36 636 636 HOH HOH . 
F 4 HOH A 37 637 637 HOH HOH . 
F 4 HOH A 38 638 638 HOH HOH . 
F 4 HOH A 39 639 639 HOH HOH . 
F 4 HOH A 40 640 640 HOH HOH . 
F 4 HOH A 41 641 641 HOH HOH . 
F 4 HOH A 42 642 642 HOH HOH . 
F 4 HOH A 43 643 643 HOH HOH . 
F 4 HOH A 44 644 644 HOH HOH . 
F 4 HOH A 45 645 645 HOH HOH . 
F 4 HOH A 46 646 646 HOH HOH . 
F 4 HOH A 47 647 647 HOH HOH . 
F 4 HOH A 48 648 648 HOH HOH . 
F 4 HOH A 49 649 649 HOH HOH . 
F 4 HOH A 50 650 650 HOH HOH . 
F 4 HOH A 51 651 651 HOH HOH . 
F 4 HOH A 52 652 652 HOH HOH . 
F 4 HOH A 53 653 653 HOH HOH . 
F 4 HOH A 54 654 654 HOH HOH . 
F 4 HOH A 55 655 655 HOH HOH . 
F 4 HOH A 56 656 656 HOH HOH . 
F 4 HOH A 57 657 657 HOH HOH . 
F 4 HOH A 58 658 658 HOH HOH . 
F 4 HOH A 59 659 659 HOH HOH . 
F 4 HOH A 60 660 660 HOH HOH . 
F 4 HOH A 61 661 661 HOH HOH . 
F 4 HOH A 62 662 662 HOH HOH . 
F 4 HOH A 63 663 663 HOH HOH . 
F 4 HOH A 64 664 664 HOH HOH . 
F 4 HOH A 65 665 665 HOH HOH . 
F 4 HOH A 66 666 666 HOH HOH . 
F 4 HOH A 67 667 667 HOH HOH . 
F 4 HOH A 68 668 668 HOH HOH . 
F 4 HOH A 69 669 669 HOH HOH . 
F 4 HOH A 70 670 670 HOH HOH . 
F 4 HOH A 71 671 671 HOH HOH . 
F 4 HOH A 72 672 672 HOH HOH . 
F 4 HOH A 73 673 673 HOH HOH . 
F 4 HOH A 74 674 674 HOH HOH . 
F 4 HOH A 75 675 675 HOH HOH . 
F 4 HOH A 76 676 676 HOH HOH . 
F 4 HOH A 77 677 677 HOH HOH . 
F 4 HOH A 78 678 678 HOH HOH . 
F 4 HOH A 79 679 679 HOH HOH . 
F 4 HOH A 80 680 680 HOH HOH . 
F 4 HOH A 81 681 681 HOH HOH . 
F 4 HOH A 82 682 682 HOH HOH . 
F 4 HOH A 83 683 683 HOH HOH . 
F 4 HOH A 84 684 684 HOH HOH . 
F 4 HOH A 85 685 685 HOH HOH . 
F 4 HOH A 86 686 686 HOH HOH . 
F 4 HOH A 87 687 687 HOH HOH . 
F 4 HOH A 88 688 688 HOH HOH . 
F 4 HOH A 89 689 689 HOH HOH . 
F 4 HOH A 90 690 690 HOH HOH . 
F 4 HOH A 91 691 691 HOH HOH . 
F 4 HOH A 92 692 692 HOH HOH . 
F 4 HOH A 93 693 693 HOH HOH . 
F 4 HOH A 94 694 694 HOH HOH . 
F 4 HOH A 95 695 695 HOH HOH . 
F 4 HOH A 96 696 696 HOH HOH . 
F 4 HOH A 97 697 697 HOH HOH . 
F 4 HOH A 98 698 698 HOH HOH . 
F 4 HOH A 99 699 699 HOH HOH . 
F 4 HOH A 100 700 700 HOH HOH . 
F 4 HOH A 101 701 701 HOH HOH . 
F 4 HOH A 102 702 702 HOH HOH . 
F 4 HOH A 103 703 703 HOH HOH . 
F 4 HOH A 104 704 704 HOH HOH . 
F 4 HOH A 105 705 705 HOH HOH . 
F 4 HOH A 106 706 706 HOH HOH . 
F 4 HOH A 107 707 707 HOH HOH . 
F 4 HOH A 108 708 708 HOH HOH . 
F 4 HOH A 109 709 709 HOH HOH . 
F 4 HOH A 110 710 710 HOH HOH . 
F 4 HOH A 111 711 711 HOH HOH . 
F 4 HOH A 112 712 712 HOH HOH . 
F 4 HOH A 113 713 713 HOH HOH . 
F 4 HOH A 114 714 714 HOH HOH . 
F 4 HOH A 115 715 715 HOH HOH . 
F 4 HOH A 116 716 716 HOH HOH . 
F 4 HOH A 117 717 717 HOH HOH . 
F 4 HOH A 118 718 718 HOH HOH . 
F 4 HOH A 119 719 719 HOH HOH . 
F 4 HOH A 120 720 720 HOH HOH . 
F 4 HOH A 121 721 721 HOH HOH . 
F 4 HOH A 122 722 722 HOH HOH . 
F 4 HOH A 123 723 723 HOH HOH . 
F 4 HOH A 124 724 724 HOH HOH . 
F 4 HOH A 125 725 725 HOH HOH . 
F 4 HOH A 126 726 726 HOH HOH . 
F 4 HOH A 127 727 727 HOH HOH . 
F 4 HOH A 128 728 728 HOH HOH . 
F 4 HOH A 129 729 729 HOH HOH . 
F 4 HOH A 130 730 730 HOH HOH . 
F 4 HOH A 131 731 731 HOH HOH . 
F 4 HOH A 132 732 732 HOH HOH . 
F 4 HOH A 133 733 733 HOH HOH . 
F 4 HOH A 134 734 734 HOH HOH . 
F 4 HOH A 135 735 735 HOH HOH . 
F 4 HOH A 136 736 736 HOH HOH . 
F 4 HOH A 137 737 737 HOH HOH . 
F 4 HOH A 138 738 738 HOH HOH . 
F 4 HOH A 139 739 739 HOH HOH . 
F 4 HOH A 140 740 740 HOH HOH . 
F 4 HOH A 141 741 741 HOH HOH . 
F 4 HOH A 142 742 742 HOH HOH . 
F 4 HOH A 143 743 743 HOH HOH . 
F 4 HOH A 144 744 744 HOH HOH . 
F 4 HOH A 145 745 745 HOH HOH . 
F 4 HOH A 146 746 746 HOH HOH . 
F 4 HOH A 147 747 747 HOH HOH . 
F 4 HOH A 148 748 748 HOH HOH . 
F 4 HOH A 149 749 749 HOH HOH . 
F 4 HOH A 150 750 750 HOH HOH . 
F 4 HOH A 151 751 751 HOH HOH . 
F 4 HOH A 152 752 752 HOH HOH . 
F 4 HOH A 153 753 753 HOH HOH . 
F 4 HOH A 154 754 754 HOH HOH . 
F 4 HOH A 155 755 755 HOH HOH . 
F 4 HOH A 156 756 756 HOH HOH . 
F 4 HOH A 157 757 757 HOH HOH . 
F 4 HOH A 158 758 758 HOH HOH . 
F 4 HOH A 159 759 759 HOH HOH . 
F 4 HOH A 160 760 760 HOH HOH . 
F 4 HOH A 161 761 761 HOH HOH . 
F 4 HOH A 162 762 762 HOH HOH . 
F 4 HOH A 163 763 763 HOH HOH . 
F 4 HOH A 164 764 764 HOH HOH . 
F 4 HOH A 165 765 765 HOH HOH . 
F 4 HOH A 166 766 766 HOH HOH . 
F 4 HOH A 167 767 767 HOH HOH . 
F 4 HOH A 168 768 768 HOH HOH . 
F 4 HOH A 169 769 769 HOH HOH . 
F 4 HOH A 170 770 770 HOH HOH . 
F 4 HOH A 171 771 771 HOH HOH . 
F 4 HOH A 172 772 772 HOH HOH . 
F 4 HOH A 173 773 773 HOH HOH . 
F 4 HOH A 174 774 774 HOH HOH . 
F 4 HOH A 175 775 775 HOH HOH . 
F 4 HOH A 176 776 776 HOH HOH . 
F 4 HOH A 177 777 777 HOH HOH . 
F 4 HOH A 178 778 778 HOH HOH . 
F 4 HOH A 179 779 779 HOH HOH . 
F 4 HOH A 180 780 780 HOH HOH . 
F 4 HOH A 181 781 781 HOH HOH . 
F 4 HOH A 182 782 782 HOH HOH . 
F 4 HOH A 183 783 783 HOH HOH . 
F 4 HOH A 184 784 784 HOH HOH . 
F 4 HOH A 185 785 785 HOH HOH . 
F 4 HOH A 186 786 786 HOH HOH . 
F 4 HOH A 187 787 787 HOH HOH . 
F 4 HOH A 188 788 788 HOH HOH . 
F 4 HOH A 189 789 789 HOH HOH . 
F 4 HOH A 190 790 790 HOH HOH . 
F 4 HOH A 191 791 791 HOH HOH . 
F 4 HOH A 192 792 792 HOH HOH . 
F 4 HOH A 193 793 793 HOH HOH . 
F 4 HOH A 194 794 794 HOH HOH . 
F 4 HOH A 195 795 795 HOH HOH . 
F 4 HOH A 196 796 796 HOH HOH . 
F 4 HOH A 197 797 797 HOH HOH . 
F 4 HOH A 198 798 798 HOH HOH . 
F 4 HOH A 199 799 800 HOH HOH . 
F 4 HOH A 200 800 799 HOH HOH . 
F 4 HOH A 201 801 801 HOH HOH . 
F 4 HOH A 202 802 802 HOH HOH . 
F 4 HOH A 203 803 803 HOH HOH . 
F 4 HOH A 204 804 804 HOH HOH . 
F 4 HOH A 205 805 805 HOH HOH . 
F 4 HOH A 206 806 806 HOH HOH . 
F 4 HOH A 207 807 807 HOH HOH . 
F 4 HOH A 208 808 808 HOH HOH . 
F 4 HOH A 209 809 809 HOH HOH . 
F 4 HOH A 210 810 810 HOH HOH . 
F 4 HOH A 211 811 811 HOH HOH . 
F 4 HOH A 212 812 812 HOH HOH . 
F 4 HOH A 213 813 813 HOH HOH . 
F 4 HOH A 214 814 814 HOH HOH . 
F 4 HOH A 215 815 815 HOH HOH . 
F 4 HOH A 216 816 816 HOH HOH . 
F 4 HOH A 217 817 817 HOH HOH . 
F 4 HOH A 218 818 818 HOH HOH . 
F 4 HOH A 219 819 819 HOH HOH . 
F 4 HOH A 220 820 820 HOH HOH . 
F 4 HOH A 221 821 821 HOH HOH . 
F 4 HOH A 222 822 822 HOH HOH . 
F 4 HOH A 223 823 823 HOH HOH . 
F 4 HOH A 224 824 824 HOH HOH . 
F 4 HOH A 225 825 825 HOH HOH . 
F 4 HOH A 226 826 826 HOH HOH . 
F 4 HOH A 227 827 827 HOH HOH . 
F 4 HOH A 228 828 828 HOH HOH . 
F 4 HOH A 229 829 829 HOH HOH . 
F 4 HOH A 230 830 830 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 54.52 21.015 2.39 1 44.47 ? C1 GOL 502 A 1 
HETATM 2 O O1 GOL . . . D 3 53.756 20.022 3.084 1 34.2 ? O1 GOL 502 A 1 
HETATM 3 C C2 GOL . . . D 3 55.814 20.294 2.082 1 45.49 ? C2 GOL 502 A 1 
HETATM 4 O O2 GOL . . . D 3 55.537 19.033 1.423 1 40.83 ? O2 GOL 502 A 1 
HETATM 5 C C3 GOL . . . D 3 56.609 21.244 1.202 1 39.2 ? C3 GOL 502 A 1 
HETATM 6 O O3 GOL . . . D 3 57.139 20.481 0.138 1 45.42 ? O3 GOL 502 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          27 
_model_server_stats.element_count           6 
#