data_6B0Y # _model_server_result.job_id p5zhvk4Mq-NkmR_K3Ho_VQ _model_server_result.datetime_utc '2024-12-14 05:06:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":205}' # _entry.id 6B0Y # _exptl.entry_id 6B0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 77.45 _cell.angle_beta 81.71 _cell.angle_gamma 77.12 _cell.entry_id 6B0Y _cell.length_a 33.43 _cell.length_b 39.66 _cell.length_c 61.85 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,N 1 1 B,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 E C28 8ZG . A 8ZG 203 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.671 ? covale ? covale2 A SG CYS 13 A CYS 12 1_555 E C28 8ZG . A 8ZG 203 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.627 ? covale ? covale3 B SG CYS 13 B CYS 12 1_555 K C28 8ZG . B 8ZG 204 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.682 ? covale ? covale4 B SG CYS 13 B CYS 12 1_555 K C28 8ZG . B 8ZG 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.642 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc2 A OE1 GLU 64 A GLU 63 1_555 D CA CA . A CA 202 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc3 A OE2 GLU 64 A GLU 63 1_555 D CA CA . A CA 202 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 A O GLY 139 A GLY 138 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc5 C CA CA . A CA 201 1_555 G O1B GDP . A GDP 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc6 C CA CA . A CA 201 1_555 N O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc7 C CA CA . A CA 201 1_555 N O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc8 C CA CA . A CA 201 1_555 N O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc9 C CA CA . A CA 201 1_555 N O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc10 D CA CA . A CA 202 1_555 N O HOH . A HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc11 D CA CA . A CA 202 1_555 N O HOH . A HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc12 D CA CA . A CA 202 1_555 N O HOH . A HOH 432 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc13 D CA CA . A CA 202 1_555 N O HOH . A HOH 434 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc14 D CA CA . A CA 202 1_555 N O HOH . A HOH 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc15 B OG SER 18 B SER 17 1_555 I CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc16 B OE1 GLU 64 B GLU 63 1_555 J CA CA . B CA 203 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc17 B OE2 GLU 64 B GLU 63 1_555 J CA CA . B CA 203 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc18 B O GLY 139 B GLY 138 1_555 J CA CA . B CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc19 I CA CA . B CA 202 1_555 M O3B GDP . B GDP 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc20 I CA CA . B CA 202 1_555 O O HOH . B HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc21 I CA CA . B CA 202 1_555 O O HOH . B HOH 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc22 I CA CA . B CA 202 1_555 O O HOH . B HOH 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc23 I CA CA . B CA 202 1_555 O O HOH . B HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc24 J CA CA . B CA 203 1_555 O O HOH . B HOH 309 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.488 ? metalc ? metalc25 J CA CA . B CA 203 1_555 O O HOH . B HOH 309 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.167 ? metalc ? metalc26 J CA CA . B CA 203 1_555 O O HOH . B HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc27 J CA CA . B CA 203 1_555 O O HOH . B HOH 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc28 J CA CA . B CA 203 1_555 O O HOH . B HOH 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 6B0Y _atom_sites.fract_transf_matrix[1][1] 0.029913 _atom_sites.fract_transf_matrix[1][2] -0.00684 _atom_sites.fract_transf_matrix[1][3] -0.003103 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025865 _atom_sites.fract_transf_matrix[2][3] -0.005058 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 201 200 CA CA . D 2 CA A 1 202 205 CA CA . E 3 8ZG A 1 203 210 8ZG 917 . F 4 GOL A 1 204 215 GOL GOL . G 5 GDP A 1 205 220 GDP GDP . H 4 GOL B 1 201 217 GOL GOL . I 2 CA B 1 202 200 CA CA . J 2 CA B 1 203 205 CA CA . K 3 8ZG B 1 204 210 8ZG 917 . L 4 GOL B 1 205 215 GOL GOL . M 5 GDP B 1 206 220 GDP GDP . N 6 HOH A 1 301 52 HOH HOH . N 6 HOH A 2 302 271 HOH HOH . N 6 HOH A 3 303 97 HOH HOH . N 6 HOH A 4 304 99 HOH HOH . N 6 HOH A 5 305 19 HOH HOH . N 6 HOH A 6 306 293 HOH HOH . N 6 HOH A 7 307 94 HOH HOH . N 6 HOH A 8 308 66 HOH HOH . N 6 HOH A 9 309 81 HOH HOH . N 6 HOH A 10 310 100 HOH HOH . N 6 HOH A 11 311 122 HOH HOH . N 6 HOH A 12 312 127 HOH HOH . N 6 HOH A 13 313 136 HOH HOH . N 6 HOH A 14 314 21 HOH HOH . N 6 HOH A 15 315 76 HOH HOH . N 6 HOH A 16 316 137 HOH HOH . N 6 HOH A 17 317 270 HOH HOH . N 6 HOH A 18 318 115 HOH HOH . N 6 HOH A 19 319 307 HOH HOH . N 6 HOH A 20 320 114 HOH HOH . N 6 HOH A 21 321 35 HOH HOH . N 6 HOH A 22 322 32 HOH HOH . N 6 HOH A 23 323 4 HOH HOH . N 6 HOH A 24 324 106 HOH HOH . N 6 HOH A 25 325 84 HOH HOH . N 6 HOH A 26 326 8 HOH HOH . N 6 HOH A 27 327 88 HOH HOH . N 6 HOH A 28 328 5 HOH HOH . N 6 HOH A 29 329 93 HOH HOH . N 6 HOH A 30 330 113 HOH HOH . N 6 HOH A 31 331 3 HOH HOH . N 6 HOH A 32 332 96 HOH HOH . N 6 HOH A 33 333 103 HOH HOH . N 6 HOH A 34 334 48 HOH HOH . N 6 HOH A 35 335 72 HOH HOH . N 6 HOH A 36 336 58 HOH HOH . N 6 HOH A 37 337 37 HOH HOH . N 6 HOH A 38 338 71 HOH HOH . N 6 HOH A 39 339 1 HOH HOH . N 6 HOH A 40 340 12 HOH HOH . N 6 HOH A 41 341 25 HOH HOH . N 6 HOH A 42 342 138 HOH HOH . N 6 HOH A 43 343 17 HOH HOH . N 6 HOH A 44 344 90 HOH HOH . N 6 HOH A 45 345 135 HOH HOH . N 6 HOH A 46 346 7 HOH HOH . N 6 HOH A 47 347 6 HOH HOH . N 6 HOH A 48 348 2 HOH HOH . N 6 HOH A 49 349 108 HOH HOH . N 6 HOH A 50 350 77 HOH HOH . N 6 HOH A 51 351 38 HOH HOH . N 6 HOH A 52 352 131 HOH HOH . N 6 HOH A 53 353 59 HOH HOH . N 6 HOH A 54 354 18 HOH HOH . N 6 HOH A 55 355 60 HOH HOH . N 6 HOH A 56 356 130 HOH HOH . N 6 HOH A 57 357 73 HOH HOH . N 6 HOH A 58 358 124 HOH HOH . N 6 HOH A 59 359 13 HOH HOH . N 6 HOH A 60 360 109 HOH HOH . N 6 HOH A 61 361 34 HOH HOH . N 6 HOH A 62 362 20 HOH HOH . N 6 HOH A 63 363 89 HOH HOH . N 6 HOH A 64 364 44 HOH HOH . N 6 HOH A 65 365 326 HOH HOH . N 6 HOH A 66 366 15 HOH HOH . N 6 HOH A 67 367 27 HOH HOH . N 6 HOH A 68 368 69 HOH HOH . N 6 HOH A 69 369 45 HOH HOH . N 6 HOH A 70 370 80 HOH HOH . N 6 HOH A 71 371 67 HOH HOH . N 6 HOH A 72 372 279 HOH HOH . N 6 HOH A 73 373 55 HOH HOH . N 6 HOH A 74 374 85 HOH HOH . N 6 HOH A 75 375 87 HOH HOH . N 6 HOH A 76 376 123 HOH HOH . N 6 HOH A 77 377 16 HOH HOH . N 6 HOH A 78 378 68 HOH HOH . N 6 HOH A 79 379 107 HOH HOH . N 6 HOH A 80 380 63 HOH HOH . N 6 HOH A 81 381 61 HOH HOH . N 6 HOH A 82 382 292 HOH HOH . N 6 HOH A 83 383 43 HOH HOH . N 6 HOH A 84 384 23 HOH HOH . N 6 HOH A 85 385 104 HOH HOH . N 6 HOH A 86 386 139 HOH HOH . N 6 HOH A 87 387 302 HOH HOH . N 6 HOH A 88 388 83 HOH HOH . N 6 HOH A 89 389 102 HOH HOH . N 6 HOH A 90 390 112 HOH HOH . N 6 HOH A 91 391 41 HOH HOH . N 6 HOH A 92 392 280 HOH HOH . N 6 HOH A 93 393 316 HOH HOH . N 6 HOH A 94 394 276 HOH HOH . N 6 HOH A 95 395 129 HOH HOH . N 6 HOH A 96 396 39 HOH HOH . N 6 HOH A 97 397 119 HOH HOH . N 6 HOH A 98 398 324 HOH HOH . N 6 HOH A 99 399 315 HOH HOH . N 6 HOH A 100 400 47 HOH HOH . N 6 HOH A 101 401 29 HOH HOH . N 6 HOH A 102 402 70 HOH HOH . N 6 HOH A 103 403 50 HOH HOH . N 6 HOH A 104 404 10 HOH HOH . N 6 HOH A 105 405 36 HOH HOH . N 6 HOH A 106 406 273 HOH HOH . N 6 HOH A 107 407 75 HOH HOH . N 6 HOH A 108 408 51 HOH HOH . N 6 HOH A 109 409 9 HOH HOH . N 6 HOH A 110 410 57 HOH HOH . N 6 HOH A 111 411 86 HOH HOH . N 6 HOH A 112 412 49 HOH HOH . N 6 HOH A 113 413 297 HOH HOH . N 6 HOH A 114 414 92 HOH HOH . N 6 HOH A 115 415 46 HOH HOH . N 6 HOH A 116 416 14 HOH HOH . N 6 HOH A 117 417 65 HOH HOH . N 6 HOH A 118 418 42 HOH HOH . N 6 HOH A 119 419 33 HOH HOH . N 6 HOH A 120 420 31 HOH HOH . N 6 HOH A 121 421 28 HOH HOH . N 6 HOH A 122 422 121 HOH HOH . N 6 HOH A 123 423 54 HOH HOH . N 6 HOH A 124 424 30 HOH HOH . N 6 HOH A 125 425 301 HOH HOH . N 6 HOH A 126 426 24 HOH HOH . N 6 HOH A 127 427 78 HOH HOH . N 6 HOH A 128 428 56 HOH HOH . N 6 HOH A 129 429 299 HOH HOH . N 6 HOH A 130 430 118 HOH HOH . N 6 HOH A 131 431 128 HOH HOH . N 6 HOH A 132 432 132 HOH HOH . N 6 HOH A 133 433 281 HOH HOH . N 6 HOH A 134 434 304 HOH HOH . N 6 HOH A 135 435 300 HOH HOH . N 6 HOH A 136 436 126 HOH HOH . N 6 HOH A 137 437 140 HOH HOH . N 6 HOH A 138 438 22 HOH HOH . N 6 HOH A 139 439 105 HOH HOH . N 6 HOH A 140 440 40 HOH HOH . N 6 HOH A 141 441 290 HOH HOH . N 6 HOH A 142 442 11 HOH HOH . N 6 HOH A 143 443 133 HOH HOH . N 6 HOH A 144 444 125 HOH HOH . N 6 HOH A 145 445 26 HOH HOH . N 6 HOH A 146 446 325 HOH HOH . N 6 HOH A 147 447 232 HOH HOH . N 6 HOH A 148 448 74 HOH HOH . N 6 HOH A 149 449 91 HOH HOH . N 6 HOH A 150 450 117 HOH HOH . N 6 HOH A 151 451 95 HOH HOH . N 6 HOH A 152 452 110 HOH HOH . N 6 HOH A 153 453 268 HOH HOH . N 6 HOH A 154 454 221 HOH HOH . N 6 HOH A 155 455 79 HOH HOH . N 6 HOH A 156 456 116 HOH HOH . N 6 HOH A 157 457 120 HOH HOH . N 6 HOH A 158 458 317 HOH HOH . N 6 HOH A 159 459 311 HOH HOH . N 6 HOH A 160 460 134 HOH HOH . N 6 HOH A 161 461 303 HOH HOH . N 6 HOH A 162 462 101 HOH HOH . N 6 HOH A 163 463 288 HOH HOH . N 6 HOH A 164 464 64 HOH HOH . O 6 HOH B 1 301 309 HOH HOH . O 6 HOH B 2 302 198 HOH HOH . O 6 HOH B 3 303 237 HOH HOH . O 6 HOH B 4 304 262 HOH HOH . O 6 HOH B 5 305 323 HOH HOH . O 6 HOH B 6 306 263 HOH HOH . O 6 HOH B 7 307 234 HOH HOH . O 6 HOH B 8 308 154 HOH HOH . O 6 HOH B 9 309 211 HOH HOH . O 6 HOH B 10 310 223 HOH HOH . O 6 HOH B 11 311 196 HOH HOH . O 6 HOH B 12 312 327 HOH HOH . O 6 HOH B 13 313 259 HOH HOH . O 6 HOH B 14 314 229 HOH HOH . O 6 HOH B 15 315 214 HOH HOH . O 6 HOH B 16 316 328 HOH HOH . O 6 HOH B 17 317 231 HOH HOH . O 6 HOH B 18 318 224 HOH HOH . O 6 HOH B 19 319 160 HOH HOH . O 6 HOH B 20 320 147 HOH HOH . O 6 HOH B 21 321 260 HOH HOH . O 6 HOH B 22 322 226 HOH HOH . O 6 HOH B 23 323 289 HOH HOH . O 6 HOH B 24 324 240 HOH HOH . O 6 HOH B 25 325 278 HOH HOH . O 6 HOH B 26 326 155 HOH HOH . O 6 HOH B 27 327 182 HOH HOH . O 6 HOH B 28 328 266 HOH HOH . O 6 HOH B 29 329 286 HOH HOH . O 6 HOH B 30 330 143 HOH HOH . O 6 HOH B 31 331 209 HOH HOH . O 6 HOH B 32 332 243 HOH HOH . O 6 HOH B 33 333 184 HOH HOH . O 6 HOH B 34 334 172 HOH HOH . O 6 HOH B 35 335 179 HOH HOH . O 6 HOH B 36 336 165 HOH HOH . O 6 HOH B 37 337 256 HOH HOH . O 6 HOH B 38 338 208 HOH HOH . O 6 HOH B 39 339 151 HOH HOH . O 6 HOH B 40 340 174 HOH HOH . O 6 HOH B 41 341 169 HOH HOH . O 6 HOH B 42 342 180 HOH HOH . O 6 HOH B 43 343 53 HOH HOH . O 6 HOH B 44 344 250 HOH HOH . O 6 HOH B 45 345 248 HOH HOH . O 6 HOH B 46 346 152 HOH HOH . O 6 HOH B 47 347 149 HOH HOH . O 6 HOH B 48 348 145 HOH HOH . O 6 HOH B 49 349 153 HOH HOH . O 6 HOH B 50 350 298 HOH HOH . O 6 HOH B 51 351 162 HOH HOH . O 6 HOH B 52 352 168 HOH HOH . O 6 HOH B 53 353 329 HOH HOH . O 6 HOH B 54 354 157 HOH HOH . O 6 HOH B 55 355 242 HOH HOH . O 6 HOH B 56 356 146 HOH HOH . O 6 HOH B 57 357 220 HOH HOH . O 6 HOH B 58 358 142 HOH HOH . O 6 HOH B 59 359 233 HOH HOH . O 6 HOH B 60 360 283 HOH HOH . O 6 HOH B 61 361 255 HOH HOH . O 6 HOH B 62 362 261 HOH HOH . O 6 HOH B 63 363 111 HOH HOH . O 6 HOH B 64 364 159 HOH HOH . O 6 HOH B 65 365 295 HOH HOH . O 6 HOH B 66 366 141 HOH HOH . O 6 HOH B 67 367 171 HOH HOH . O 6 HOH B 68 368 216 HOH HOH . O 6 HOH B 69 369 314 HOH HOH . O 6 HOH B 70 370 181 HOH HOH . O 6 HOH B 71 371 203 HOH HOH . O 6 HOH B 72 372 191 HOH HOH . O 6 HOH B 73 373 201 HOH HOH . O 6 HOH B 74 374 164 HOH HOH . O 6 HOH B 75 375 239 HOH HOH . O 6 HOH B 76 376 206 HOH HOH . O 6 HOH B 77 377 183 HOH HOH . O 6 HOH B 78 378 194 HOH HOH . O 6 HOH B 79 379 245 HOH HOH . O 6 HOH B 80 380 189 HOH HOH . O 6 HOH B 81 381 144 HOH HOH . O 6 HOH B 82 382 285 HOH HOH . O 6 HOH B 83 383 265 HOH HOH . O 6 HOH B 84 384 170 HOH HOH . O 6 HOH B 85 385 236 HOH HOH . O 6 HOH B 86 386 210 HOH HOH . O 6 HOH B 87 387 188 HOH HOH . O 6 HOH B 88 388 161 HOH HOH . O 6 HOH B 89 389 218 HOH HOH . O 6 HOH B 90 390 150 HOH HOH . O 6 HOH B 91 391 82 HOH HOH . O 6 HOH B 92 392 62 HOH HOH . O 6 HOH B 93 393 200 HOH HOH . O 6 HOH B 94 394 235 HOH HOH . O 6 HOH B 95 395 249 HOH HOH . O 6 HOH B 96 396 190 HOH HOH . O 6 HOH B 97 397 228 HOH HOH . O 6 HOH B 98 398 230 HOH HOH . O 6 HOH B 99 399 202 HOH HOH . O 6 HOH B 100 400 98 HOH HOH . O 6 HOH B 101 401 277 HOH HOH . O 6 HOH B 102 402 163 HOH HOH . O 6 HOH B 103 403 158 HOH HOH . O 6 HOH B 104 404 321 HOH HOH . O 6 HOH B 105 405 177 HOH HOH . O 6 HOH B 106 406 238 HOH HOH . O 6 HOH B 107 407 175 HOH HOH . O 6 HOH B 108 408 166 HOH HOH . O 6 HOH B 109 409 187 HOH HOH . O 6 HOH B 110 410 274 HOH HOH . O 6 HOH B 111 411 176 HOH HOH . O 6 HOH B 112 412 197 HOH HOH . O 6 HOH B 113 413 241 HOH HOH . O 6 HOH B 114 414 275 HOH HOH . O 6 HOH B 115 415 185 HOH HOH . O 6 HOH B 116 416 178 HOH HOH . O 6 HOH B 117 417 225 HOH HOH . O 6 HOH B 118 418 207 HOH HOH . O 6 HOH B 119 419 291 HOH HOH . O 6 HOH B 120 420 212 HOH HOH . O 6 HOH B 121 421 227 HOH HOH . O 6 HOH B 122 422 215 HOH HOH . O 6 HOH B 123 423 167 HOH HOH . O 6 HOH B 124 424 244 HOH HOH . O 6 HOH B 125 425 219 HOH HOH . O 6 HOH B 126 426 264 HOH HOH . O 6 HOH B 127 427 213 HOH HOH . O 6 HOH B 128 428 192 HOH HOH . O 6 HOH B 129 429 267 HOH HOH . O 6 HOH B 130 430 294 HOH HOH . O 6 HOH B 131 431 313 HOH HOH . O 6 HOH B 132 432 204 HOH HOH . O 6 HOH B 133 433 252 HOH HOH . O 6 HOH B 134 434 156 HOH HOH . O 6 HOH B 135 435 246 HOH HOH . O 6 HOH B 136 436 310 HOH HOH . O 6 HOH B 137 437 308 HOH HOH . O 6 HOH B 138 438 222 HOH HOH . O 6 HOH B 139 439 186 HOH HOH . O 6 HOH B 140 440 217 HOH HOH . O 6 HOH B 141 441 148 HOH HOH . O 6 HOH B 142 442 258 HOH HOH . O 6 HOH B 143 443 254 HOH HOH . O 6 HOH B 144 444 312 HOH HOH . O 6 HOH B 145 445 320 HOH HOH . O 6 HOH B 146 446 269 HOH HOH . O 6 HOH B 147 447 257 HOH HOH . O 6 HOH B 148 448 306 HOH HOH . O 6 HOH B 149 449 296 HOH HOH . O 6 HOH B 150 450 322 HOH HOH . O 6 HOH B 151 451 247 HOH HOH . O 6 HOH B 152 452 282 HOH HOH . O 6 HOH B 153 453 205 HOH HOH . O 6 HOH B 154 454 253 HOH HOH . O 6 HOH B 155 455 173 HOH HOH . O 6 HOH B 156 456 318 HOH HOH . O 6 HOH B 157 457 193 HOH HOH . O 6 HOH B 158 458 305 HOH HOH . O 6 HOH B 159 459 272 HOH HOH . O 6 HOH B 160 460 284 HOH HOH . O 6 HOH B 161 461 319 HOH HOH . O 6 HOH B 162 462 195 HOH HOH . O 6 HOH B 163 463 251 HOH HOH . O 6 HOH B 164 464 287 HOH HOH . O 6 HOH B 165 465 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . G 5 -9.541 4.49 3.551 1 7.57 ? PB GDP 205 A 1 HETATM 2 O O1B GDP . . . G 5 -9.444 5.863 3.053 1 7.95 ? O1B GDP 205 A 1 HETATM 3 O O2B GDP . . . G 5 -8.314 3.921 4.288 1 8.33 -1 O2B GDP 205 A 1 HETATM 4 O O3B GDP . . . G 5 -10.786 4.226 4.387 1 7.52 ? O3B GDP 205 A 1 HETATM 5 O O3A GDP . . . G 5 -9.743 3.507 2.273 1 8.3 ? O3A GDP 205 A 1 HETATM 6 P PA GDP . . . G 5 -9.535 3.827 0.704 1 8.71 ? PA GDP 205 A 1 HETATM 7 O O1A GDP . . . G 5 -10.558 4.752 0.213 1 8.54 -1 O1A GDP 205 A 1 HETATM 8 O O2A GDP . . . G 5 -8.118 4.175 0.465 1 9.94 ? O2A GDP 205 A 1 HETATM 9 O O5' GDP . . . G 5 -9.895 2.417 0.059 1 9.31 ? O5' GDP 205 A 1 HETATM 10 C C5' GDP . . . G 5 -9.166 1.302 0.516 1 9.86 ? C5' GDP 205 A 1 HETATM 11 C C4' GDP . . . G 5 -9.238 0.235 -0.612 1 11.16 ? C4' GDP 205 A 1 HETATM 12 O O4' GDP . . . G 5 -10.591 -0.259 -0.82 1 10.82 ? O4' GDP 205 A 1 HETATM 13 C C3' GDP . . . G 5 -8.751 0.744 -1.976 1 11.8 ? C3' GDP 205 A 1 HETATM 14 O O3' GDP . . . G 5 -8.198 -0.393 -2.704 1 13.23 ? O3' GDP 205 A 1 HETATM 15 C C2' GDP . . . G 5 -10.03 1.099 -2.715 1 12.19 ? C2' GDP 205 A 1 HETATM 16 O O2' GDP . . . G 5 -10.068 1.045 -4.14 1 14.5 ? O2' GDP 205 A 1 HETATM 17 C C1' GDP . . . G 5 -10.981 0.003 -2.137 1 11.64 ? C1' GDP 205 A 1 HETATM 18 N N9 GDP . . . G 5 -12.409 0.399 -2.065 1 10.1 ? N9 GDP 205 A 1 HETATM 19 C C8 GDP . . . G 5 -12.975 1.532 -1.495 1 9.31 ? C8 GDP 205 A 1 HETATM 20 N N7 GDP . . . G 5 -14.282 1.628 -1.642 1 9.07 ? N7 GDP 205 A 1 HETATM 21 C C5 GDP . . . G 5 -14.643 0.485 -2.322 1 9.02 ? C5 GDP 205 A 1 HETATM 22 C C6 GDP . . . G 5 -15.909 -0.027 -2.751 1 8.94 ? C6 GDP 205 A 1 HETATM 23 O O6 GDP . . . G 5 -16.95 0.549 -2.555 1 8.79 ? O6 GDP 205 A 1 HETATM 24 N N1 GDP . . . G 5 -15.858 -1.219 -3.404 1 9.21 ? N1 GDP 205 A 1 HETATM 25 C C2 GDP . . . G 5 -14.722 -1.885 -3.543 1 9.7 ? C2 GDP 205 A 1 HETATM 26 N N2 GDP . . . G 5 -14.794 -3.096 -4.209 1 11.25 ? N2 GDP 205 A 1 HETATM 27 N N3 GDP . . . G 5 -13.496 -1.465 -3.206 1 9.33 ? N3 GDP 205 A 1 HETATM 28 C C4 GDP . . . G 5 -13.444 -0.25 -2.558 1 9.38 ? C4 GDP 205 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 28 #