data_6B22
#
_model_server_result.job_id            Qdz9Jn65gLlH9f1UUtoN1w 
_model_server_result.datetime_utc      '2024-11-15 10:01:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b22 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6B22 
#
_exptl.entry_id    6B22 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              249.244 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6B22 
_cell.length_a            102.539 
_cell.length_b            102.539 
_cell.length_c            84.312 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B22 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C7 H11 N3 O5 S' 
_chem_comp.formula_weight    249.244 
_chem_comp.id                C8Y 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'open form - WCK 4234' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
NAA CAF C8Y trip 70 n n 
CAF CAM C8Y sing 71 n n 
CAJ NAO C8Y sing 72 n n 
CAJ CAN C8Y sing 73 n n 
NAO CAM C8Y sing 74 n n 
NAO CAG C8Y sing 75 n n 
CAM CAH C8Y sing 76 n n 
CAG OAB C8Y doub 77 n n 
CAN CAI C8Y sing 78 n n 
CAN NAK C8Y sing 79 n n 
CAI CAH C8Y sing 80 n n 
NAK OAL C8Y sing 81 n n 
OAC SAP C8Y doub 82 n n 
OAL SAP C8Y sing 83 n n 
SAP OAE C8Y doub 84 n n 
SAP OAD C8Y sing 85 n n 
NAK H1 C8Y sing 86 n n 
CAN H2 C8Y sing 87 n n 
CAI H3 C8Y sing 88 n n 
CAI H4 C8Y sing 89 n n 
CAH H5 C8Y sing 90 n n 
CAH H6 C8Y sing 91 n n 
CAM H7 C8Y sing 92 n n 
CAG H8 C8Y sing 93 n n 
CAJ H9 C8Y sing 94 n n 
CAJ H10 C8Y sing 95 n n 
OAD H11 C8Y sing 96 n n 
#
_atom_sites.entry_id                     6B22 
_atom_sites.fract_transf_matrix[1][1]    0.009752 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009752 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011861 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 C8Y A 1 301 2 C8Y DRG . 
C 3 CL A 1 302 400 CL CL . 
D 3 CL A 1 303 401 CL CL . 
E 4 HOH A 1 401 198 HOH HOH . 
E 4 HOH A 2 402 68 HOH HOH . 
E 4 HOH A 3 403 259 HOH HOH . 
E 4 HOH A 4 404 258 HOH HOH . 
E 4 HOH A 5 405 157 HOH HOH . 
E 4 HOH A 6 406 35 HOH HOH . 
E 4 HOH A 7 407 54 HOH HOH . 
E 4 HOH A 8 408 107 HOH HOH . 
E 4 HOH A 9 409 104 HOH HOH . 
E 4 HOH A 10 410 45 HOH HOH . 
E 4 HOH A 11 411 128 HOH HOH . 
E 4 HOH A 12 412 134 HOH HOH . 
E 4 HOH A 13 413 135 HOH HOH . 
E 4 HOH A 14 414 114 HOH HOH . 
E 4 HOH A 15 415 197 HOH HOH . 
E 4 HOH A 16 416 74 HOH HOH . 
E 4 HOH A 17 417 20 HOH HOH . 
E 4 HOH A 18 418 26 HOH HOH . 
E 4 HOH A 19 419 214 HOH HOH . 
E 4 HOH A 20 420 29 HOH HOH . 
E 4 HOH A 21 421 7 HOH HOH . 
E 4 HOH A 22 422 83 HOH HOH . 
E 4 HOH A 23 423 256 HOH HOH . 
E 4 HOH A 24 424 93 HOH HOH . 
E 4 HOH A 25 425 28 HOH HOH . 
E 4 HOH A 26 426 117 HOH HOH . 
E 4 HOH A 27 427 8 HOH HOH . 
E 4 HOH A 28 428 47 HOH HOH . 
E 4 HOH A 29 429 186 HOH HOH . 
E 4 HOH A 30 430 112 HOH HOH . 
E 4 HOH A 31 431 33 HOH HOH . 
E 4 HOH A 32 432 160 HOH HOH . 
E 4 HOH A 33 433 185 HOH HOH . 
E 4 HOH A 34 434 96 HOH HOH . 
E 4 HOH A 35 435 60 HOH HOH . 
E 4 HOH A 36 436 85 HOH HOH . 
E 4 HOH A 37 437 50 HOH HOH . 
E 4 HOH A 38 438 129 HOH HOH . 
E 4 HOH A 39 439 220 HOH HOH . 
E 4 HOH A 40 440 90 HOH HOH . 
E 4 HOH A 41 441 77 HOH HOH . 
E 4 HOH A 42 442 219 HOH HOH . 
E 4 HOH A 43 443 70 HOH HOH . 
E 4 HOH A 44 444 94 HOH HOH . 
E 4 HOH A 45 445 73 HOH HOH . 
E 4 HOH A 46 446 80 HOH HOH . 
E 4 HOH A 47 447 109 HOH HOH . 
E 4 HOH A 48 448 17 HOH HOH . 
E 4 HOH A 49 449 56 HOH HOH . 
E 4 HOH A 50 450 11 HOH HOH . 
E 4 HOH A 51 451 79 HOH HOH . 
E 4 HOH A 52 452 12 HOH HOH . 
E 4 HOH A 53 453 44 HOH HOH . 
E 4 HOH A 54 454 21 HOH HOH . 
E 4 HOH A 55 455 231 HOH HOH . 
E 4 HOH A 56 456 150 HOH HOH . 
E 4 HOH A 57 457 148 HOH HOH . 
E 4 HOH A 58 458 87 HOH HOH . 
E 4 HOH A 59 459 52 HOH HOH . 
E 4 HOH A 60 460 30 HOH HOH . 
E 4 HOH A 61 461 5 HOH HOH . 
E 4 HOH A 62 462 229 HOH HOH . 
E 4 HOH A 63 463 233 HOH HOH . 
E 4 HOH A 64 464 177 HOH HOH . 
E 4 HOH A 65 465 55 HOH HOH . 
E 4 HOH A 66 466 179 HOH HOH . 
E 4 HOH A 67 467 213 HOH HOH . 
E 4 HOH A 68 468 9 HOH HOH . 
E 4 HOH A 69 469 49 HOH HOH . 
E 4 HOH A 70 470 38 HOH HOH . 
E 4 HOH A 71 471 51 HOH HOH . 
E 4 HOH A 72 472 4 HOH HOH . 
E 4 HOH A 73 473 146 HOH HOH . 
E 4 HOH A 74 474 224 HOH HOH . 
E 4 HOH A 75 475 61 HOH HOH . 
E 4 HOH A 76 476 66 HOH HOH . 
E 4 HOH A 77 477 162 HOH HOH . 
E 4 HOH A 78 478 63 HOH HOH . 
E 4 HOH A 79 479 22 HOH HOH . 
E 4 HOH A 80 480 10 HOH HOH . 
E 4 HOH A 81 481 48 HOH HOH . 
E 4 HOH A 82 482 126 HOH HOH . 
E 4 HOH A 83 483 195 HOH HOH . 
E 4 HOH A 84 484 76 HOH HOH . 
E 4 HOH A 85 485 64 HOH HOH . 
E 4 HOH A 86 486 155 HOH HOH . 
E 4 HOH A 87 487 206 HOH HOH . 
E 4 HOH A 88 488 161 HOH HOH . 
E 4 HOH A 89 489 123 HOH HOH . 
E 4 HOH A 90 490 153 HOH HOH . 
E 4 HOH A 91 491 102 HOH HOH . 
E 4 HOH A 92 492 130 HOH HOH . 
E 4 HOH A 93 493 120 HOH HOH . 
E 4 HOH A 94 494 238 HOH HOH . 
E 4 HOH A 95 495 25 HOH HOH . 
E 4 HOH A 96 496 143 HOH HOH . 
E 4 HOH A 97 497 59 HOH HOH . 
E 4 HOH A 98 498 232 HOH HOH . 
E 4 HOH A 99 499 207 HOH HOH . 
E 4 HOH A 100 500 19 HOH HOH . 
E 4 HOH A 101 501 105 HOH HOH . 
E 4 HOH A 102 502 15 HOH HOH . 
E 4 HOH A 103 503 100 HOH HOH . 
E 4 HOH A 104 504 98 HOH HOH . 
E 4 HOH A 105 505 103 HOH HOH . 
E 4 HOH A 106 506 78 HOH HOH . 
E 4 HOH A 107 507 81 HOH HOH . 
E 4 HOH A 108 508 125 HOH HOH . 
E 4 HOH A 109 509 34 HOH HOH . 
E 4 HOH A 110 510 31 HOH HOH . 
E 4 HOH A 111 511 86 HOH HOH . 
E 4 HOH A 112 512 212 HOH HOH . 
E 4 HOH A 113 513 57 HOH HOH . 
E 4 HOH A 114 514 36 HOH HOH . 
E 4 HOH A 115 515 246 HOH HOH . 
E 4 HOH A 116 516 144 HOH HOH . 
E 4 HOH A 117 517 18 HOH HOH . 
E 4 HOH A 118 518 24 HOH HOH . 
E 4 HOH A 119 519 16 HOH HOH . 
E 4 HOH A 120 520 205 HOH HOH . 
E 4 HOH A 121 521 67 HOH HOH . 
E 4 HOH A 122 522 3 HOH HOH . 
E 4 HOH A 123 523 218 HOH HOH . 
E 4 HOH A 124 524 97 HOH HOH . 
E 4 HOH A 125 525 235 HOH HOH . 
E 4 HOH A 126 526 202 HOH HOH . 
E 4 HOH A 127 527 108 HOH HOH . 
E 4 HOH A 128 528 122 HOH HOH . 
E 4 HOH A 129 529 184 HOH HOH . 
E 4 HOH A 130 530 65 HOH HOH . 
E 4 HOH A 131 531 119 HOH HOH . 
E 4 HOH A 132 532 176 HOH HOH . 
E 4 HOH A 133 533 221 HOH HOH . 
E 4 HOH A 134 534 110 HOH HOH . 
E 4 HOH A 135 535 216 HOH HOH . 
E 4 HOH A 136 536 181 HOH HOH . 
E 4 HOH A 137 537 132 HOH HOH . 
E 4 HOH A 138 538 37 HOH HOH . 
E 4 HOH A 139 539 225 HOH HOH . 
E 4 HOH A 140 540 106 HOH HOH . 
E 4 HOH A 141 541 245 HOH HOH . 
E 4 HOH A 142 542 39 HOH HOH . 
E 4 HOH A 143 543 230 HOH HOH . 
E 4 HOH A 144 544 183 HOH HOH . 
E 4 HOH A 145 545 149 HOH HOH . 
E 4 HOH A 146 546 154 HOH HOH . 
E 4 HOH A 147 547 236 HOH HOH . 
E 4 HOH A 148 548 200 HOH HOH . 
E 4 HOH A 149 549 215 HOH HOH . 
E 4 HOH A 150 550 194 HOH HOH . 
E 4 HOH A 151 551 124 HOH HOH . 
E 4 HOH A 152 552 14 HOH HOH . 
E 4 HOH A 153 553 91 HOH HOH . 
E 4 HOH A 154 554 228 HOH HOH . 
E 4 HOH A 155 555 145 HOH HOH . 
E 4 HOH A 156 556 32 HOH HOH . 
E 4 HOH A 157 557 133 HOH HOH . 
E 4 HOH A 158 558 27 HOH HOH . 
E 4 HOH A 159 559 72 HOH HOH . 
E 4 HOH A 160 560 199 HOH HOH . 
E 4 HOH A 161 561 136 HOH HOH . 
E 4 HOH A 162 562 180 HOH HOH . 
E 4 HOH A 163 563 182 HOH HOH . 
E 4 HOH A 164 564 46 HOH HOH . 
E 4 HOH A 165 565 240 HOH HOH . 
E 4 HOH A 166 566 137 HOH HOH . 
E 4 HOH A 167 567 23 HOH HOH . 
E 4 HOH A 168 568 141 HOH HOH . 
E 4 HOH A 169 569 92 HOH HOH . 
E 4 HOH A 170 570 187 HOH HOH . 
E 4 HOH A 171 571 151 HOH HOH . 
E 4 HOH A 172 572 13 HOH HOH . 
E 4 HOH A 173 573 140 HOH HOH . 
E 4 HOH A 174 574 138 HOH HOH . 
E 4 HOH A 175 575 88 HOH HOH . 
E 4 HOH A 176 576 152 HOH HOH . 
E 4 HOH A 177 577 40 HOH HOH . 
E 4 HOH A 178 578 2 HOH HOH . 
E 4 HOH A 179 579 6 HOH HOH . 
E 4 HOH A 180 580 62 HOH HOH . 
E 4 HOH A 181 581 42 HOH HOH . 
E 4 HOH A 182 582 71 HOH HOH . 
E 4 HOH A 183 583 127 HOH HOH . 
E 4 HOH A 184 584 118 HOH HOH . 
E 4 HOH A 185 585 196 HOH HOH . 
E 4 HOH A 186 586 203 HOH HOH . 
E 4 HOH A 187 587 204 HOH HOH . 
E 4 HOH A 188 588 217 HOH HOH . 
E 4 HOH A 189 589 174 HOH HOH . 
E 4 HOH A 190 590 111 HOH HOH . 
E 4 HOH A 191 591 101 HOH HOH . 
E 4 HOH A 192 592 116 HOH HOH . 
E 4 HOH A 193 593 115 HOH HOH . 
E 4 HOH A 194 594 188 HOH HOH . 
E 4 HOH A 195 595 208 HOH HOH . 
E 4 HOH A 196 596 192 HOH HOH . 
E 4 HOH A 197 597 95 HOH HOH . 
E 4 HOH A 198 598 253 HOH HOH . 
E 4 HOH A 199 599 121 HOH HOH . 
E 4 HOH A 200 600 139 HOH HOH . 
E 4 HOH A 201 601 142 HOH HOH . 
E 4 HOH A 202 602 257 HOH HOH . 
E 4 HOH A 203 603 167 HOH HOH . 
E 4 HOH A 204 604 169 HOH HOH . 
E 4 HOH A 205 605 131 HOH HOH . 
E 4 HOH A 206 606 69 HOH HOH . 
E 4 HOH A 207 607 113 HOH HOH . 
E 4 HOH A 208 608 75 HOH HOH . 
E 4 HOH A 209 609 171 HOH HOH . 
E 4 HOH A 210 610 147 HOH HOH . 
E 4 HOH A 211 611 43 HOH HOH . 
E 4 HOH A 212 612 166 HOH HOH . 
E 4 HOH A 213 613 172 HOH HOH . 
E 4 HOH A 214 614 99 HOH HOH . 
E 4 HOH A 215 615 159 HOH HOH . 
E 4 HOH A 216 616 173 HOH HOH . 
E 4 HOH A 217 617 84 HOH HOH . 
E 4 HOH A 218 618 158 HOH HOH . 
E 4 HOH A 219 619 41 HOH HOH . 
E 4 HOH A 220 620 53 HOH HOH . 
E 4 HOH A 221 621 165 HOH HOH . 
E 4 HOH A 222 622 58 HOH HOH . 
E 4 HOH A 223 623 82 HOH HOH . 
E 4 HOH A 224 624 156 HOH HOH . 
E 4 HOH A 225 625 178 HOH HOH . 
E 4 HOH A 226 626 191 HOH HOH . 
E 4 HOH A 227 627 255 HOH HOH . 
E 4 HOH A 228 628 168 HOH HOH . 
E 4 HOH A 229 629 89 HOH HOH . 
E 4 HOH A 230 630 241 HOH HOH . 
E 4 HOH A 231 631 170 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAE C8Y . . . B 2 2.939 -32.007 -11.25 1 47.1 ? OAE C8Y 301 A 1 
HETATM 2 S SAP C8Y . . . B 2 2.106 -31.982 -10.079 1 45.52 ? SAP C8Y 301 A 1 
HETATM 3 O OAC C8Y . . . B 2 2.741 -30.915 -9.321 1 52.57 ? OAC C8Y 301 A 1 
HETATM 4 O OAD C8Y . . . B 2 2.17 -33.221 -9.262 1 45.82 ? OAD C8Y 301 A 1 
HETATM 5 O OAL C8Y . . . B 2 0.66 -31.591 -10.463 1 48.58 ? OAL C8Y 301 A 1 
HETATM 6 N NAK C8Y . . . B 2 -0.428 -32.436 -10.247 1 44.95 ? NAK C8Y 301 A 1 
HETATM 7 C CAN C8Y . . . B 2 -1.537 -32.227 -11.196 1 39.23 ? CAN C8Y 301 A 1 
HETATM 8 C CAI C8Y . . . B 2 -1.498 -33.384 -12.231 1 39.73 ? CAI C8Y 301 A 1 
HETATM 9 C CAH C8Y . . . B 2 -0.438 -33.119 -13.335 1 36.94 ? CAH C8Y 301 A 1 
HETATM 10 C CAM C8Y . . . B 2 -0.693 -31.824 -14.099 1 35.92 ? CAM C8Y 301 A 1 
HETATM 11 C CAF C8Y . . . B 2 -1.901 -31.746 -14.684 1 38.88 ? CAF C8Y 301 A 1 
HETATM 12 N NAA C8Y . . . B 2 -2.807 -31.687 -15.102 1 44.98 ? NAA C8Y 301 A 1 
HETATM 13 N NAO C8Y . . . B 2 -0.723 -30.718 -13.129 1 37.82 ? NAO C8Y 301 A 1 
HETATM 14 C CAG C8Y . . . B 2 0.339 -29.885 -13.154 1 31.89 ? CAG C8Y 301 A 1 
HETATM 15 O OAB C8Y . . . B 2 1.494 -29.961 -13.604 1 25 ? OAB C8Y 301 A 1 
HETATM 16 C CAJ C8Y . . . B 2 -1.587 -30.859 -11.885 1 36.85 ? CAJ C8Y 301 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           16 
#