data_6B25 # _model_server_result.job_id uuHYcSBHUGVWlzLc3fEMug _model_server_result.datetime_utc '2024-12-26 21:33:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6B25 # _exptl.entry_id 6B25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B25 _cell.length_a 28.958 _cell.length_b 36.727 _cell.length_c 113.001 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 6B25 _atom_sites.fract_transf_matrix[1][1] 0.034533 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 201 1 EPE EPE . C 3 HOH A 1 301 30 HOH HOH . C 3 HOH A 2 302 27 HOH HOH . C 3 HOH A 3 303 11 HOH HOH . C 3 HOH A 4 304 1 HOH HOH . C 3 HOH A 5 305 3 HOH HOH . C 3 HOH A 6 306 38 HOH HOH . C 3 HOH A 7 307 2 HOH HOH . C 3 HOH A 8 308 14 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 16 HOH HOH . C 3 HOH A 11 311 17 HOH HOH . C 3 HOH A 12 312 31 HOH HOH . C 3 HOH A 13 313 4 HOH HOH . C 3 HOH A 14 314 7 HOH HOH . C 3 HOH A 15 315 39 HOH HOH . C 3 HOH A 16 316 6 HOH HOH . C 3 HOH A 17 317 12 HOH HOH . C 3 HOH A 18 318 10 HOH HOH . C 3 HOH A 19 319 33 HOH HOH . C 3 HOH A 20 320 25 HOH HOH . C 3 HOH A 21 321 22 HOH HOH . C 3 HOH A 22 322 13 HOH HOH . C 3 HOH A 23 323 18 HOH HOH . C 3 HOH A 24 324 29 HOH HOH . C 3 HOH A 25 325 15 HOH HOH . C 3 HOH A 26 326 5 HOH HOH . C 3 HOH A 27 327 28 HOH HOH . C 3 HOH A 28 328 32 HOH HOH . C 3 HOH A 29 329 23 HOH HOH . C 3 HOH A 30 330 20 HOH HOH . C 3 HOH A 31 331 36 HOH HOH . C 3 HOH A 32 332 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . B 2 -3.298 27.048 33.901 1 43.6 ? N1 EPE 201 A 1 HETATM 2 C C2 EPE . . . B 2 -2.158 26.402 34.57 1 39.84 ? C2 EPE 201 A 1 HETATM 3 C C3 EPE . . . B 2 -1.216 27.423 35.236 1 40.1 ? C3 EPE 201 A 1 HETATM 4 N N4 EPE . . . B 2 -0.871 28.582 34.367 1 40.72 ? N4 EPE 201 A 1 HETATM 5 C C5 EPE . . . B 2 -2.104 29.124 33.764 1 39.2 ? C5 EPE 201 A 1 HETATM 6 C C6 EPE . . . B 2 -2.745 28.021 32.943 1 41.1 ? C6 EPE 201 A 1 HETATM 7 C C7 EPE . . . B 2 -0.123 29.664 35.078 1 38.63 ? C7 EPE 201 A 1 HETATM 8 C C8 EPE . . . B 2 0.777 30.481 34.136 1 39.36 ? C8 EPE 201 A 1 HETATM 9 O O8 EPE . . . B 2 0.749 31.912 34.384 1 41.27 ? O8 EPE 201 A 1 HETATM 10 C C9 EPE . . . B 2 -4.256 26.049 33.348 1 51.28 ? C9 EPE 201 A 1 HETATM 11 C C10 EPE . . . B 2 -5.434 26.692 32.581 1 60.15 ? C10 EPE 201 A 1 HETATM 12 S S EPE . . . B 2 -7.002 26.31 33.031 1 70.69 ? S EPE 201 A 1 HETATM 13 O O1S EPE . . . B 2 -7.501 25.035 32.428 1 66.65 ? O1S EPE 201 A 1 HETATM 14 O O2S EPE . . . B 2 -7.838 27.435 32.527 1 69.33 ? O2S EPE 201 A 1 HETATM 15 O O3S EPE . . . B 2 -7.093 26.273 34.513 1 73.07 ? O3S EPE 201 A 1 # _model_server_stats.io_time_ms 39 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #