data_6B2E # _model_server_result.job_id bh1TC9YS2Eu1JSUikxIzOQ _model_server_result.datetime_utc '2024-10-19 03:54:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 6B2E # _exptl.entry_id 6B2E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 471.892 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5-{[6-chloro-5-(2'-hydroxy[1,1'-biphenyl]-4-yl)-1H-imidazo[4,5-b]pyridin-2-yl]oxy}-2-methylbenzoic acid" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B2E _cell.length_a 113.936 _cell.length_b 118.848 _cell.length_c 138.096 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B2E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 1 7 GLC GLC C1 O1 . O4 HO4 . sing 2 ? 4 2 1 GLC GLC C1 O1 . O4 HO4 . sing 3 ? 4 3 2 GLC GLC C1 O1 . O4 HO4 . sing 4 ? 4 4 3 GLC GLC C1 O1 . O4 HO4 . sing 5 ? 4 5 4 GLC GLC C1 O1 . O4 HO4 . sing 6 ? 4 6 5 GLC GLC C1 O1 . O4 HO4 . sing 7 ? 4 7 6 GLC GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D GLC 1 D 1 GLC E 1 BCD 4 n D GLC 2 D 2 GLC E 1 BCD 4 n D GLC 3 D 3 GLC E 1 BCD 4 n D GLC 4 D 4 GLC E 1 BCD 4 n D GLC 5 D 5 GLC E 1 BCD 4 n D GLC 6 D 6 GLC E 1 BCD 4 n D GLC 7 D 7 GLC E 1 BCD # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 184 A ARG 171 1_555 A N TPO 185 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C TPO 185 A TPO 172 1_555 A N SER 186 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 B C LYS 107 B LYS 107 1_555 B N SEP 108 B SEP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 B C SEP 108 B SEP 108 1_555 B N HIS 109 B HIS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 sing covale ? covale6 D C1 GLC . D GLC 1 1_555 D O4 GLC . D GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 sing covale ? covale7 D O4 GLC . D GLC 2 1_555 D C1 GLC . D GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 sing covale ? covale8 D O4 GLC . D GLC 3 1_555 D C1 GLC . D GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 sing covale ? covale9 D O4 GLC . D GLC 4 1_555 D C1 GLC . D GLC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 sing covale ? covale10 D O4 GLC . D GLC 5 1_555 D C1 GLC . D GLC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 sing covale ? covale11 D O4 GLC . D GLC 6 1_555 D C1 GLC . D GLC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 sing # _chem_comp.formula 'C26 H18 Cl N3 O4' _chem_comp.formula_weight 471.892 _chem_comp.id CG7 _chem_comp.mon_nstd_flag . _chem_comp.name "5-{[6-chloro-5-(2'-hydroxy[1,1'-biphenyl]-4-yl)-1H-imidazo[4,5-b]pyridin-2-yl]oxy}-2-methylbenzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAC CAV CG7 doub 109 n n CAA CAW CG7 sing 110 n n CAV CBD CG7 sing 111 n n CAV OAB CG7 sing 112 n n CAW CBD CG7 doub 113 n y CAW CAI CG7 sing 114 n y CBD CAP CG7 sing 115 n y CAI CAK CG7 doub 116 n y CAP CAZ CG7 doub 117 n y CAK CAZ CG7 sing 118 n y CAZ OAU CG7 sing 119 n n OAU CBC CG7 sing 120 n n CBC NAT CG7 doub 121 n y CBC NAR CG7 sing 122 n y NAT CBH CG7 sing 123 n y NAR CBG CG7 sing 124 n y CBH CBG CG7 doub 125 n y CBH NAS CG7 sing 126 n y CBG CAQ CG7 sing 127 n y NAS CBF CG7 doub 128 n y CAQ CAY CG7 doub 129 n y CBF CAY CG7 sing 130 n y CBF CBB CG7 sing 131 n n CAY CL1 CG7 sing 132 n n CAO CBB CG7 doub 133 n y CAO CAM CG7 sing 134 n y CBB CAN CG7 sing 135 n y CAM CBA CG7 doub 136 n y CAN CAL CG7 doub 137 n y CBA CAL CG7 sing 138 n y CBA CBE CG7 sing 139 n n OAD CAX CG7 sing 140 n n CBE CAX CG7 doub 141 n y CBE CAJ CG7 sing 142 n y CAX CAH CG7 sing 143 n y CAJ CAG CG7 doub 144 n y CAH CAF CG7 doub 145 n y CAG CAF CG7 sing 146 n y OAB H1 CG7 sing 147 n n CAP H2 CG7 sing 148 n n CAA H3 CG7 sing 149 n n CAA H4 CG7 sing 150 n n CAA H5 CG7 sing 151 n n CAI H6 CG7 sing 152 n n CAK H7 CG7 sing 153 n n NAR H8 CG7 sing 154 n n CAQ H10 CG7 sing 155 n n CAO H11 CG7 sing 156 n n CAM H12 CG7 sing 157 n n CAN H13 CG7 sing 158 n n CAL H14 CG7 sing 159 n n CAJ H15 CG7 sing 160 n n CAG H16 CG7 sing 161 n n CAF H17 CG7 sing 162 n n CAH H18 CG7 sing 163 n n OAD H19 CG7 sing 164 n n # _atom_sites.entry_id 6B2E _atom_sites.fract_transf_matrix[1][1] 0.008777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008414 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 STU A 1 601 600 STU STU . F 6 CG7 A 1 602 1 CG7 DRG . G 7 AMP C 1 400 400 AMP AMP . H 7 AMP C 1 401 401 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAB CG7 . . . F 6 -20.968 -48.573 4.202 1 137.91 ? OAB CG7 602 A 1 HETATM 2 C CAV CG7 . . . F 6 -22.005 -47.971 4.557 1 137.75 ? CAV CG7 602 A 1 HETATM 3 O OAC CG7 . . . F 6 -22.657 -48.376 5.544 1 137.79 ? OAC CG7 602 A 1 HETATM 4 C CBD CG7 . . . F 6 -22.444 -46.853 3.847 1 137.48 ? CBD CG7 602 A 1 HETATM 5 C CAP CG7 . . . F 6 -23.398 -47.053 2.843 1 137.25 ? CAP CG7 602 A 1 HETATM 6 C CAW CG7 . . . F 6 -21.975 -45.548 4.108 1 137.42 ? CAW CG7 602 A 1 HETATM 7 C CAA CG7 . . . F 6 -21.022 -45.271 5.093 1 137.46 ? CAA CG7 602 A 1 HETATM 8 C CAI CG7 . . . F 6 -22.466 -44.473 3.357 1 137.28 ? CAI CG7 602 A 1 HETATM 9 C CAK CG7 . . . F 6 -23.422 -44.681 2.36 1 137.15 ? CAK CG7 602 A 1 HETATM 10 C CAZ CG7 . . . F 6 -23.874 -45.978 2.086 1 137.11 ? CAZ CG7 602 A 1 HETATM 11 O OAU CG7 . . . F 6 -24.823 -46.207 1.129 1 136.98 ? OAU CG7 602 A 1 HETATM 12 C CBC CG7 . . . F 6 -24.419 -46.019 -0.163 1 136.81 ? CBC CG7 602 A 1 HETATM 13 N NAR CG7 . . . F 6 -25.105 -45.316 -1.053 1 136.65 ? NAR CG7 602 A 1 HETATM 14 N NAT CG7 . . . F 6 -23.359 -46.575 -0.743 1 136.78 ? NAT CG7 602 A 1 HETATM 15 C CBH CG7 . . . F 6 -23.354 -46.167 -2.012 1 136.7 ? CBH CG7 602 A 1 HETATM 16 N NAS CG7 . . . F 6 -22.498 -46.417 -3.029 1 136.71 ? NAS CG7 602 A 1 HETATM 17 C CBG CG7 . . . F 6 -24.437 -45.392 -2.2 1 136.62 ? CBG CG7 602 A 1 HETATM 18 C CAQ CG7 . . . F 6 -24.692 -44.864 -3.401 1 136.59 ? CAQ CG7 602 A 1 HETATM 19 C CAY CG7 . . . F 6 -23.819 -45.077 -4.466 1 136.72 ? CAY CG7 602 A 1 HETATM 20 CL CL1 CG7 . . . F 6 -24.198 -44.337 -5.997 1 136.87 ? CL1 CG7 602 A 1 HETATM 21 C CBF CG7 . . . F 6 -22.697 -45.901 -4.264 1 136.73 ? CBF CG7 602 A 1 HETATM 22 C CBB CG7 . . . F 6 -21.766 -46.164 -5.278 1 136.76 ? CBB CG7 602 A 1 HETATM 23 C CAO CG7 . . . F 6 -22.162 -46.753 -6.487 1 136.73 ? CAO CG7 602 A 1 HETATM 24 C CAM CG7 . . . F 6 -21.232 -46.992 -7.5 1 136.82 ? CAM CG7 602 A 1 HETATM 25 C CAN CG7 . . . F 6 -20.41 -45.86 -5.08 1 136.86 ? CAN CG7 602 A 1 HETATM 26 C CAL CG7 . . . F 6 -19.469 -46.136 -6.079 1 136.87 ? CAL CG7 602 A 1 HETATM 27 C CBA CG7 . . . F 6 -19.877 -46.691 -7.302 1 136.91 ? CBA CG7 602 A 1 HETATM 28 C CBE CG7 . . . F 6 -18.955 -46.954 -8.325 1 137.08 ? CBE CG7 602 A 1 HETATM 29 C CAJ CG7 . . . F 6 -18.789 -48.269 -8.784 1 137.1 ? CAJ CG7 602 A 1 HETATM 30 C CAG CG7 . . . F 6 -17.891 -48.556 -9.817 1 137.21 ? CAG CG7 602 A 1 HETATM 31 C CAF CG7 . . . F 6 -17.147 -47.536 -10.415 1 137.31 ? CAF CG7 602 A 1 HETATM 32 C CAH CG7 . . . F 6 -17.306 -46.219 -9.978 1 137.32 ? CAH CG7 602 A 1 HETATM 33 C CAX CG7 . . . F 6 -18.209 -45.934 -8.948 1 137.28 ? CAX CG7 602 A 1 HETATM 34 O OAD CG7 . . . F 6 -18.374 -44.657 -8.504 1 137.39 ? OAD CG7 602 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 34 #