data_6B2K # _model_server_result.job_id GUTAK38_Q1h-6fV59Qbvxw _model_server_result.datetime_utc '2024-11-23 17:28:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":308}' # _entry.id 6B2K # _exptl.entry_id 6B2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6B2K _cell.length_a 92.431 _cell.length_b 92.431 _cell.length_c 57.702 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 198 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 198 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 218 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 218 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id B _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.046 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6B2K _atom_sites.fract_transf_matrix[1][1] 0.010819 _atom_sites.fract_transf_matrix[1][2] 0.006246 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01733 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 301 301 IOD IOD . C 2 IOD A 1 302 302 IOD IOD . D 2 IOD A 1 303 303 IOD IOD . E 2 IOD A 1 304 304 IOD IOD . F 2 IOD A 1 305 305 IOD IOD . G 2 IOD A 1 306 306 IOD IOD . H 2 IOD A 1 307 307 IOD IOD . I 2 IOD A 1 308 308 IOD IOD . J 3 CL A 1 309 309 CL CL . K 3 CL A 1 310 310 CL CL . L 3 CL A 1 311 311 CL CL . M 3 CL A 1 312 312 CL CL . N 3 CL A 1 313 313 CL CL . O 3 CL A 1 314 314 CL CL . P 3 CL A 1 315 315 CL CL . Q 4 HOH A 1 401 536 HOH HOH . Q 4 HOH A 2 402 585 HOH HOH . Q 4 HOH A 3 403 621 HOH HOH . Q 4 HOH A 4 404 638 HOH HOH . Q 4 HOH A 5 405 557 HOH HOH . Q 4 HOH A 6 406 564 HOH HOH . Q 4 HOH A 7 407 622 HOH HOH . Q 4 HOH A 8 408 520 HOH HOH . Q 4 HOH A 9 409 502 HOH HOH . Q 4 HOH A 10 410 632 HOH HOH . Q 4 HOH A 11 411 525 HOH HOH . Q 4 HOH A 12 412 501 HOH HOH . Q 4 HOH A 13 413 550 HOH HOH . Q 4 HOH A 14 414 544 HOH HOH . Q 4 HOH A 15 415 576 HOH HOH . Q 4 HOH A 16 416 522 HOH HOH . Q 4 HOH A 17 417 640 HOH HOH . Q 4 HOH A 18 418 565 HOH HOH . Q 4 HOH A 19 419 517 HOH HOH . Q 4 HOH A 20 420 587 HOH HOH . Q 4 HOH A 21 421 618 HOH HOH . Q 4 HOH A 22 422 543 HOH HOH . Q 4 HOH A 23 423 634 HOH HOH . Q 4 HOH A 24 424 530 HOH HOH . Q 4 HOH A 25 425 590 HOH HOH . Q 4 HOH A 26 426 521 HOH HOH . Q 4 HOH A 27 427 524 HOH HOH . Q 4 HOH A 28 428 628 HOH HOH . Q 4 HOH A 29 429 504 HOH HOH . Q 4 HOH A 30 430 537 HOH HOH . Q 4 HOH A 31 431 574 HOH HOH . Q 4 HOH A 32 432 631 HOH HOH . Q 4 HOH A 33 433 620 HOH HOH . Q 4 HOH A 34 434 637 HOH HOH . Q 4 HOH A 35 435 515 HOH HOH . Q 4 HOH A 36 436 506 HOH HOH . Q 4 HOH A 37 437 573 HOH HOH . Q 4 HOH A 38 438 578 HOH HOH . Q 4 HOH A 39 439 555 HOH HOH . Q 4 HOH A 40 440 510 HOH HOH . Q 4 HOH A 41 441 572 HOH HOH . Q 4 HOH A 42 442 616 HOH HOH . Q 4 HOH A 43 443 606 HOH HOH . Q 4 HOH A 44 444 512 HOH HOH . Q 4 HOH A 45 445 629 HOH HOH . Q 4 HOH A 46 446 527 HOH HOH . Q 4 HOH A 47 447 513 HOH HOH . Q 4 HOH A 48 448 582 HOH HOH . Q 4 HOH A 49 449 523 HOH HOH . Q 4 HOH A 50 450 526 HOH HOH . Q 4 HOH A 51 451 625 HOH HOH . Q 4 HOH A 52 452 589 HOH HOH . Q 4 HOH A 53 453 580 HOH HOH . Q 4 HOH A 54 454 551 HOH HOH . Q 4 HOH A 55 455 516 HOH HOH . Q 4 HOH A 56 456 635 HOH HOH . Q 4 HOH A 57 457 630 HOH HOH . Q 4 HOH A 58 458 645 HOH HOH . Q 4 HOH A 59 459 540 HOH HOH . Q 4 HOH A 60 460 568 HOH HOH . Q 4 HOH A 61 461 607 HOH HOH . Q 4 HOH A 62 462 623 HOH HOH . Q 4 HOH A 63 463 511 HOH HOH . Q 4 HOH A 64 464 619 HOH HOH . Q 4 HOH A 65 465 519 HOH HOH . Q 4 HOH A 66 466 584 HOH HOH . Q 4 HOH A 67 467 529 HOH HOH . Q 4 HOH A 68 468 535 HOH HOH . Q 4 HOH A 69 469 571 HOH HOH . Q 4 HOH A 70 470 507 HOH HOH . Q 4 HOH A 71 471 542 HOH HOH . Q 4 HOH A 72 472 518 HOH HOH . Q 4 HOH A 73 473 503 HOH HOH . Q 4 HOH A 74 474 575 HOH HOH . Q 4 HOH A 75 475 539 HOH HOH . Q 4 HOH A 76 476 538 HOH HOH . Q 4 HOH A 77 477 514 HOH HOH . Q 4 HOH A 78 478 541 HOH HOH . Q 4 HOH A 79 479 596 HOH HOH . Q 4 HOH A 80 480 559 HOH HOH . Q 4 HOH A 81 481 508 HOH HOH . Q 4 HOH A 82 482 528 HOH HOH . Q 4 HOH A 83 483 642 HOH HOH . Q 4 HOH A 84 484 597 HOH HOH . Q 4 HOH A 85 485 556 HOH HOH . Q 4 HOH A 86 486 579 HOH HOH . Q 4 HOH A 87 487 532 HOH HOH . Q 4 HOH A 88 488 604 HOH HOH . Q 4 HOH A 89 489 643 HOH HOH . Q 4 HOH A 90 490 534 HOH HOH . Q 4 HOH A 91 491 561 HOH HOH . Q 4 HOH A 92 492 581 HOH HOH . Q 4 HOH A 93 493 569 HOH HOH . Q 4 HOH A 94 494 531 HOH HOH . Q 4 HOH A 95 495 609 HOH HOH . Q 4 HOH A 96 496 570 HOH HOH . Q 4 HOH A 97 497 613 HOH HOH . Q 4 HOH A 98 498 624 HOH HOH . Q 4 HOH A 99 499 644 HOH HOH . Q 4 HOH A 100 500 533 HOH HOH . Q 4 HOH A 101 501 598 HOH HOH . Q 4 HOH A 102 502 509 HOH HOH . Q 4 HOH A 103 503 554 HOH HOH . Q 4 HOH A 104 504 641 HOH HOH . Q 4 HOH A 105 505 626 HOH HOH . Q 4 HOH A 106 506 599 HOH HOH . Q 4 HOH A 107 507 636 HOH HOH . Q 4 HOH A 108 508 562 HOH HOH . Q 4 HOH A 109 509 549 HOH HOH . Q 4 HOH A 110 510 567 HOH HOH . Q 4 HOH A 111 511 586 HOH HOH . Q 4 HOH A 112 512 552 HOH HOH . Q 4 HOH A 113 513 600 HOH HOH . Q 4 HOH A 114 514 627 HOH HOH . Q 4 HOH A 115 515 505 HOH HOH . Q 4 HOH A 116 516 563 HOH HOH . Q 4 HOH A 117 517 605 HOH HOH . Q 4 HOH A 118 518 592 HOH HOH . Q 4 HOH A 119 519 611 HOH HOH . Q 4 HOH A 120 520 617 HOH HOH . Q 4 HOH A 121 521 547 HOH HOH . Q 4 HOH A 122 522 583 HOH HOH . Q 4 HOH A 123 523 612 HOH HOH . Q 4 HOH A 124 524 566 HOH HOH . Q 4 HOH A 125 525 633 HOH HOH . Q 4 HOH A 126 526 608 HOH HOH . Q 4 HOH A 127 527 591 HOH HOH . Q 4 HOH A 128 528 546 HOH HOH . Q 4 HOH A 129 529 548 HOH HOH . Q 4 HOH A 130 530 577 HOH HOH . Q 4 HOH A 131 531 558 HOH HOH . Q 4 HOH A 132 532 545 HOH HOH . Q 4 HOH A 133 533 593 HOH HOH . Q 4 HOH A 134 534 560 HOH HOH . Q 4 HOH A 135 535 614 HOH HOH . Q 4 HOH A 136 536 594 HOH HOH . Q 4 HOH A 137 537 610 HOH HOH . Q 4 HOH A 138 538 601 HOH HOH . Q 4 HOH A 139 539 595 HOH HOH . Q 4 HOH A 140 540 639 HOH HOH . Q 4 HOH A 141 541 588 HOH HOH . Q 4 HOH A 142 542 602 HOH HOH . Q 4 HOH A 143 543 553 HOH HOH . Q 4 HOH A 144 544 615 HOH HOH . Q 4 HOH A 145 545 603 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.776 _atom_site.Cartn_y -17.378 _atom_site.Cartn_z -32.667 _atom_site.occupancy 0.55 _atom_site.B_iso_or_equiv 103.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 308 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #