data_6B2S
#
_model_server_result.job_id            Y8zgiUnkSIuQWicQuLXbjw 
_model_server_result.datetime_utc      '2024-11-24 22:47:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b2s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":402}' 
#
_entry.id    6B2S 
#
_exptl.entry_id    6B2S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6B2S 
_cell.length_a            81.517 
_cell.length_b            85.077 
_cell.length_c            103.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B2S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 H N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ALA 142 A ALA 142 1_555 A N CSO 143 A CSO 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale2 A C CSO 143 A CSO 143 1_555 A N LEU 144 A LEU 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale3 B C ALA 142 B ALA 142 1_555 B N CSO 143 B CSO 143 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.352 ? 
covale ? covale4 B C ALA 142 B ALA 142 1_555 B N CSO 143 B CSO 143 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.346 ? 
covale ? covale5 B C CSO 143 B CSO 143 1_555 B N LEU 144 B LEU 144 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.305 ? 
covale ? covale6 B C CSO 143 B CSO 143 1_555 B N LEU 144 B LEU 144 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.31 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 143 n n 
C1 C2 GOL sing 144 n n 
C1 H11 GOL sing 145 n n 
C1 H12 GOL sing 146 n n 
O1 HO1 GOL sing 147 n n 
C2 O2 GOL sing 148 n n 
C2 C3 GOL sing 149 n n 
C2 H2 GOL sing 150 n n 
O2 HO2 GOL sing 151 n n 
C3 O3 GOL sing 152 n n 
C3 H31 GOL sing 153 n n 
C3 H32 GOL sing 154 n n 
O3 HO3 GOL sing 155 n n 
#
_atom_sites.entry_id                     6B2S 
_atom_sites.fract_transf_matrix[1][1]    0.012267 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011754 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009682 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 401 2 GOL GOL . 
D 2 GOL A 1 402 3 GOL GOL . 
E 2 GOL A 1 403 4 GOL GOL . 
F 3 PO4 A 1 404 1 PO4 PO4 . 
G 3 PO4 A 1 405 4 PO4 PO4 . 
H 2 GOL B 1 401 1 GOL GOL . 
I 2 GOL B 1 402 5 GOL GOL . 
J 3 PO4 B 1 403 2 PO4 PO4 . 
K 3 PO4 B 1 404 3 PO4 PO4 . 
L 4 HOH A 1 501 139 HOH HOH . 
L 4 HOH A 2 502 90 HOH HOH . 
L 4 HOH A 3 503 125 HOH HOH . 
L 4 HOH A 4 504 14 HOH HOH . 
L 4 HOH A 5 505 67 HOH HOH . 
L 4 HOH A 6 506 99 HOH HOH . 
L 4 HOH A 7 507 126 HOH HOH . 
L 4 HOH A 8 508 140 HOH HOH . 
L 4 HOH A 9 509 83 HOH HOH . 
L 4 HOH A 10 510 1 HOH HOH . 
L 4 HOH A 11 511 33 HOH HOH . 
L 4 HOH A 12 512 105 HOH HOH . 
L 4 HOH A 13 513 94 HOH HOH . 
L 4 HOH A 14 514 23 HOH HOH . 
L 4 HOH A 15 515 71 HOH HOH . 
L 4 HOH A 16 516 55 HOH HOH . 
L 4 HOH A 17 517 141 HOH HOH . 
L 4 HOH A 18 518 57 HOH HOH . 
L 4 HOH A 19 519 82 HOH HOH . 
L 4 HOH A 20 520 132 HOH HOH . 
L 4 HOH A 21 521 72 HOH HOH . 
L 4 HOH A 22 522 37 HOH HOH . 
L 4 HOH A 23 523 38 HOH HOH . 
L 4 HOH A 24 524 9 HOH HOH . 
L 4 HOH A 25 525 107 HOH HOH . 
L 4 HOH A 26 526 2 HOH HOH . 
L 4 HOH A 27 527 19 HOH HOH . 
L 4 HOH A 28 528 32 HOH HOH . 
L 4 HOH A 29 529 56 HOH HOH . 
L 4 HOH A 30 530 53 HOH HOH . 
L 4 HOH A 31 531 25 HOH HOH . 
L 4 HOH A 32 532 46 HOH HOH . 
L 4 HOH A 33 533 64 HOH HOH . 
L 4 HOH A 34 534 39 HOH HOH . 
L 4 HOH A 35 535 26 HOH HOH . 
L 4 HOH A 36 536 137 HOH HOH . 
L 4 HOH A 37 537 62 HOH HOH . 
L 4 HOH A 38 538 52 HOH HOH . 
L 4 HOH A 39 539 7 HOH HOH . 
L 4 HOH A 40 540 51 HOH HOH . 
L 4 HOH A 41 541 29 HOH HOH . 
L 4 HOH A 42 542 58 HOH HOH . 
L 4 HOH A 43 543 34 HOH HOH . 
L 4 HOH A 44 544 117 HOH HOH . 
L 4 HOH A 45 545 97 HOH HOH . 
L 4 HOH A 46 546 110 HOH HOH . 
L 4 HOH A 47 547 124 HOH HOH . 
L 4 HOH A 48 548 80 HOH HOH . 
L 4 HOH A 49 549 112 HOH HOH . 
L 4 HOH A 50 550 77 HOH HOH . 
L 4 HOH A 51 551 45 HOH HOH . 
L 4 HOH A 52 552 128 HOH HOH . 
L 4 HOH A 53 553 111 HOH HOH . 
L 4 HOH A 54 554 131 HOH HOH . 
L 4 HOH A 55 555 11 HOH HOH . 
L 4 HOH A 56 556 35 HOH HOH . 
L 4 HOH A 57 557 95 HOH HOH . 
L 4 HOH A 58 558 68 HOH HOH . 
L 4 HOH A 59 559 119 HOH HOH . 
L 4 HOH A 60 560 133 HOH HOH . 
L 4 HOH A 61 561 106 HOH HOH . 
L 4 HOH A 62 562 50 HOH HOH . 
L 4 HOH A 63 563 92 HOH HOH . 
L 4 HOH A 64 564 15 HOH HOH . 
L 4 HOH A 65 565 96 HOH HOH . 
L 4 HOH A 66 566 114 HOH HOH . 
L 4 HOH A 67 567 129 HOH HOH . 
L 4 HOH A 68 568 76 HOH HOH . 
L 4 HOH A 69 569 138 HOH HOH . 
L 4 HOH A 70 570 116 HOH HOH . 
L 4 HOH A 71 571 44 HOH HOH . 
L 4 HOH A 72 572 122 HOH HOH . 
L 4 HOH A 73 573 3 HOH HOH . 
L 4 HOH A 74 574 93 HOH HOH . 
L 4 HOH A 75 575 136 HOH HOH . 
L 4 HOH A 76 576 66 HOH HOH . 
M 4 HOH B 1 501 98 HOH HOH . 
M 4 HOH B 2 502 75 HOH HOH . 
M 4 HOH B 3 503 78 HOH HOH . 
M 4 HOH B 4 504 27 HOH HOH . 
M 4 HOH B 5 505 100 HOH HOH . 
M 4 HOH B 6 506 86 HOH HOH . 
M 4 HOH B 7 507 123 HOH HOH . 
M 4 HOH B 8 508 4 HOH HOH . 
M 4 HOH B 9 509 102 HOH HOH . 
M 4 HOH B 10 510 10 HOH HOH . 
M 4 HOH B 11 511 18 HOH HOH . 
M 4 HOH B 12 512 135 HOH HOH . 
M 4 HOH B 13 513 6 HOH HOH . 
M 4 HOH B 14 514 20 HOH HOH . 
M 4 HOH B 15 515 42 HOH HOH . 
M 4 HOH B 16 516 28 HOH HOH . 
M 4 HOH B 17 517 69 HOH HOH . 
M 4 HOH B 18 518 79 HOH HOH . 
M 4 HOH B 19 519 22 HOH HOH . 
M 4 HOH B 20 520 13 HOH HOH . 
M 4 HOH B 21 521 74 HOH HOH . 
M 4 HOH B 22 522 109 HOH HOH . 
M 4 HOH B 23 523 101 HOH HOH . 
M 4 HOH B 24 524 12 HOH HOH . 
M 4 HOH B 25 525 30 HOH HOH . 
M 4 HOH B 26 526 54 HOH HOH . 
M 4 HOH B 27 527 40 HOH HOH . 
M 4 HOH B 28 528 60 HOH HOH . 
M 4 HOH B 29 529 16 HOH HOH . 
M 4 HOH B 30 530 59 HOH HOH . 
M 4 HOH B 31 531 43 HOH HOH . 
M 4 HOH B 32 532 118 HOH HOH . 
M 4 HOH B 33 533 85 HOH HOH . 
M 4 HOH B 34 534 142 HOH HOH . 
M 4 HOH B 35 535 120 HOH HOH . 
M 4 HOH B 36 536 36 HOH HOH . 
M 4 HOH B 37 537 104 HOH HOH . 
M 4 HOH B 38 538 70 HOH HOH . 
M 4 HOH B 39 539 63 HOH HOH . 
M 4 HOH B 40 540 31 HOH HOH . 
M 4 HOH B 41 541 121 HOH HOH . 
M 4 HOH B 42 542 130 HOH HOH . 
M 4 HOH B 43 543 17 HOH HOH . 
M 4 HOH B 44 544 48 HOH HOH . 
M 4 HOH B 45 545 127 HOH HOH . 
M 4 HOH B 46 546 47 HOH HOH . 
M 4 HOH B 47 547 73 HOH HOH . 
M 4 HOH B 48 548 108 HOH HOH . 
M 4 HOH B 49 549 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 2 -20.499 30.951 1.199 1 54.88 ? C1 GOL 402 B 1 
HETATM 2 O O1 GOL . . . I 2 -21.629 30.82 2.039 1 61.63 ? O1 GOL 402 B 1 
HETATM 3 C C2 GOL . . . I 2 -20.807 32.263 0.549 1 52.95 ? C2 GOL 402 B 1 
HETATM 4 O O2 GOL . . . I 2 -21.085 33.227 1.55 1 61.81 ? O2 GOL 402 B 1 
HETATM 5 C C3 GOL . . . I 2 -19.675 32.701 -0.363 1 52.62 ? C3 GOL 402 B 1 
HETATM 6 O O3 GOL . . . I 2 -20.371 33.138 -1.531 1 46.72 ? O3 GOL 402 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           333 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#