data_6B3F # _model_server_result.job_id sGxGsMdUnJgtUy7YBKqIPQ _model_server_result.datetime_utc '2025-03-05 19:28:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 6B3F # _exptl.entry_id 6B3F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 621.712 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-fluoro-2-{2-[(2S,5S)-5-methyl-1-(phenylsulfonyl)piperazin-2-yl]ethyl}phenyl)-3,3-bis(4-fluorophenyl)propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B3F _cell.length_a 58.55 _cell.length_b 85.94 _cell.length_c 46.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H34 F3 N3 O3 S' _chem_comp.formula_weight 621.712 _chem_comp.id CKV _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-fluoro-2-{2-[(2S,5S)-5-methyl-1-(phenylsulfonyl)piperazin-2-yl]ethyl}phenyl)-3,3-bis(4-fluorophenyl)propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F37 C28 CKV sing 70 n n C28 C29 CKV doub 71 n y C28 C27 CKV sing 72 n y C29 C30 CKV sing 73 n y C27 C26 CKV doub 74 n y C30 C25 CKV doub 75 n y C26 C25 CKV sing 76 n y C25 C23 CKV sing 77 n n C34 C35 CKV doub 78 n y C34 C33 CKV sing 79 n y F36 C33 CKV sing 80 n n C35 C24 CKV sing 81 n y C33 C32 CKV doub 82 n y C24 C23 CKV sing 83 n n C24 C31 CKV doub 84 n y C32 C31 CKV sing 85 n y C23 C22 CKV sing 86 n n C8 C9 CKV doub 87 n y C8 C7 CKV sing 88 n y C9 C10 CKV sing 89 n y C7 C6 CKV doub 90 n y C22 C20 CKV sing 91 n n O S CKV doub 92 n n C10 C11 CKV doub 93 n y C6 C11 CKV sing 94 n y C6 S CKV sing 95 n n C20 N19 CKV sing 96 n n C20 O21 CKV doub 97 n n S O5 CKV doub 98 n n S N3 CKV sing 99 n n N19 C14 CKV sing 100 n n C2 C1 CKV sing 101 n n C2 N3 CKV sing 102 n n C2 C4 CKV sing 103 n n C1 N CKV sing 104 n n N3 C38 CKV sing 105 n n C12 C4 CKV sing 106 n n C12 C13 CKV sing 107 n n C14 C13 CKV doub 108 n y C14 C15 CKV sing 109 n y N C CKV sing 110 n n C13 C18 CKV sing 111 n y C38 C CKV sing 112 n n C C39 CKV sing 113 n n C15 C16 CKV doub 114 n y C18 F CKV sing 115 n n C18 C17 CKV doub 116 n y C16 C17 CKV sing 117 n y C2 H1 CKV sing 118 n n C7 H2 CKV sing 119 n n C9 H3 CKV sing 120 n n C10 H4 CKV sing 121 n n C11 H5 CKV sing 122 n n C12 H6 CKV sing 123 n n C12 H7 CKV sing 124 n n C15 H8 CKV sing 125 n n N19 H9 CKV sing 126 n n C22 H10 CKV sing 127 n n C22 H11 CKV sing 128 n n C8 H12 CKV sing 129 n n C16 H13 CKV sing 130 n n C26 H14 CKV sing 131 n n C30 H15 CKV sing 132 n n C31 H16 CKV sing 133 n n C35 H17 CKV sing 134 n n C17 H18 CKV sing 135 n n C27 H19 CKV sing 136 n n C29 H20 CKV sing 137 n n C32 H21 CKV sing 138 n n C34 H22 CKV sing 139 n n C38 H23 CKV sing 140 n n C38 H24 CKV sing 141 n n C1 H25 CKV sing 142 n n C1 H26 CKV sing 143 n n C H27 CKV sing 144 n n C39 H28 CKV sing 145 n n C39 H29 CKV sing 146 n n C39 H30 CKV sing 147 n n C4 H31 CKV sing 148 n n C4 H32 CKV sing 149 n n C23 H33 CKV sing 150 n n N H34 CKV sing 151 n n # _atom_sites.entry_id 6B3F _atom_sites.fract_transf_matrix[1][1] 0.017079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02151 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 101 1 CL CL . D 3 CKV B 1 101 1 CKV MRK . E 2 CL B 1 102 2 CL CL . F 2 CL B 1 103 3 CL CL . G 4 HOH A 1 201 149 HOH HOH . G 4 HOH A 2 202 29 HOH HOH . G 4 HOH A 3 203 67 HOH HOH . G 4 HOH A 4 204 52 HOH HOH . G 4 HOH A 5 205 81 HOH HOH . G 4 HOH A 6 206 96 HOH HOH . G 4 HOH A 7 207 117 HOH HOH . G 4 HOH A 8 208 140 HOH HOH . G 4 HOH A 9 209 132 HOH HOH . G 4 HOH A 10 210 100 HOH HOH . G 4 HOH A 11 211 131 HOH HOH . G 4 HOH A 12 212 27 HOH HOH . G 4 HOH A 13 213 156 HOH HOH . G 4 HOH A 14 214 88 HOH HOH . G 4 HOH A 15 215 39 HOH HOH . G 4 HOH A 16 216 46 HOH HOH . G 4 HOH A 17 217 95 HOH HOH . G 4 HOH A 18 218 83 HOH HOH . G 4 HOH A 19 219 145 HOH HOH . G 4 HOH A 20 220 11 HOH HOH . G 4 HOH A 21 221 65 HOH HOH . G 4 HOH A 22 222 73 HOH HOH . G 4 HOH A 23 223 2 HOH HOH . G 4 HOH A 24 224 12 HOH HOH . G 4 HOH A 25 225 10 HOH HOH . G 4 HOH A 26 226 37 HOH HOH . G 4 HOH A 27 227 59 HOH HOH . G 4 HOH A 28 228 4 HOH HOH . G 4 HOH A 29 229 135 HOH HOH . G 4 HOH A 30 230 138 HOH HOH . G 4 HOH A 31 231 8 HOH HOH . G 4 HOH A 32 232 68 HOH HOH . G 4 HOH A 33 233 113 HOH HOH . G 4 HOH A 34 234 50 HOH HOH . G 4 HOH A 35 235 101 HOH HOH . G 4 HOH A 36 236 76 HOH HOH . G 4 HOH A 37 237 129 HOH HOH . G 4 HOH A 38 238 79 HOH HOH . G 4 HOH A 39 239 128 HOH HOH . G 4 HOH A 40 240 54 HOH HOH . G 4 HOH A 41 241 127 HOH HOH . G 4 HOH A 42 242 109 HOH HOH . G 4 HOH A 43 243 123 HOH HOH . G 4 HOH A 44 244 5 HOH HOH . G 4 HOH A 45 245 58 HOH HOH . G 4 HOH A 46 246 40 HOH HOH . G 4 HOH A 47 247 121 HOH HOH . G 4 HOH A 48 248 51 HOH HOH . G 4 HOH A 49 249 142 HOH HOH . G 4 HOH A 50 250 84 HOH HOH . G 4 HOH A 51 251 24 HOH HOH . G 4 HOH A 52 252 31 HOH HOH . G 4 HOH A 53 253 134 HOH HOH . G 4 HOH A 54 254 72 HOH HOH . G 4 HOH A 55 255 97 HOH HOH . G 4 HOH A 56 256 17 HOH HOH . G 4 HOH A 57 257 85 HOH HOH . G 4 HOH A 58 258 16 HOH HOH . G 4 HOH A 59 259 116 HOH HOH . G 4 HOH A 60 260 107 HOH HOH . G 4 HOH A 61 261 155 HOH HOH . G 4 HOH A 62 262 108 HOH HOH . G 4 HOH A 63 263 98 HOH HOH . G 4 HOH A 64 264 45 HOH HOH . G 4 HOH A 65 265 159 HOH HOH . G 4 HOH A 66 266 118 HOH HOH . G 4 HOH A 67 267 104 HOH HOH . G 4 HOH A 68 268 78 HOH HOH . G 4 HOH A 69 269 42 HOH HOH . G 4 HOH A 70 270 144 HOH HOH . G 4 HOH A 71 271 114 HOH HOH . H 4 HOH B 1 201 64 HOH HOH . H 4 HOH B 2 202 105 HOH HOH . H 4 HOH B 3 203 75 HOH HOH . H 4 HOH B 4 204 9 HOH HOH . H 4 HOH B 5 205 80 HOH HOH . H 4 HOH B 6 206 49 HOH HOH . H 4 HOH B 7 207 66 HOH HOH . H 4 HOH B 8 208 89 HOH HOH . H 4 HOH B 9 209 133 HOH HOH . H 4 HOH B 10 210 122 HOH HOH . H 4 HOH B 11 211 103 HOH HOH . H 4 HOH B 12 212 102 HOH HOH . H 4 HOH B 13 213 15 HOH HOH . H 4 HOH B 14 214 111 HOH HOH . H 4 HOH B 15 215 60 HOH HOH . H 4 HOH B 16 216 139 HOH HOH . H 4 HOH B 17 217 157 HOH HOH . H 4 HOH B 18 218 34 HOH HOH . H 4 HOH B 19 219 1 HOH HOH . H 4 HOH B 20 220 55 HOH HOH . H 4 HOH B 21 221 124 HOH HOH . H 4 HOH B 22 222 20 HOH HOH . H 4 HOH B 23 223 63 HOH HOH . H 4 HOH B 24 224 77 HOH HOH . H 4 HOH B 25 225 7 HOH HOH . H 4 HOH B 26 226 62 HOH HOH . H 4 HOH B 27 227 151 HOH HOH . H 4 HOH B 28 228 28 HOH HOH . H 4 HOH B 29 229 82 HOH HOH . H 4 HOH B 30 230 3 HOH HOH . H 4 HOH B 31 231 26 HOH HOH . H 4 HOH B 32 232 106 HOH HOH . H 4 HOH B 33 233 22 HOH HOH . H 4 HOH B 34 234 71 HOH HOH . H 4 HOH B 35 235 126 HOH HOH . H 4 HOH B 36 236 93 HOH HOH . H 4 HOH B 37 237 23 HOH HOH . H 4 HOH B 38 238 53 HOH HOH . H 4 HOH B 39 239 94 HOH HOH . H 4 HOH B 40 240 56 HOH HOH . H 4 HOH B 41 241 30 HOH HOH . H 4 HOH B 42 242 115 HOH HOH . H 4 HOH B 43 243 141 HOH HOH . H 4 HOH B 44 244 6 HOH HOH . H 4 HOH B 45 245 91 HOH HOH . H 4 HOH B 46 246 18 HOH HOH . H 4 HOH B 47 247 38 HOH HOH . H 4 HOH B 48 248 136 HOH HOH . H 4 HOH B 49 249 148 HOH HOH . H 4 HOH B 50 250 143 HOH HOH . H 4 HOH B 51 251 48 HOH HOH . H 4 HOH B 52 252 36 HOH HOH . H 4 HOH B 53 253 74 HOH HOH . H 4 HOH B 54 254 120 HOH HOH . H 4 HOH B 55 255 21 HOH HOH . H 4 HOH B 56 256 92 HOH HOH . H 4 HOH B 57 257 61 HOH HOH . H 4 HOH B 58 258 137 HOH HOH . H 4 HOH B 59 259 152 HOH HOH . H 4 HOH B 60 260 35 HOH HOH . H 4 HOH B 61 261 32 HOH HOH . H 4 HOH B 62 262 87 HOH HOH . H 4 HOH B 63 263 57 HOH HOH . H 4 HOH B 64 264 19 HOH HOH . H 4 HOH B 65 265 110 HOH HOH . H 4 HOH B 66 266 13 HOH HOH . H 4 HOH B 67 267 146 HOH HOH . H 4 HOH B 68 268 112 HOH HOH . H 4 HOH B 69 269 33 HOH HOH . H 4 HOH B 70 270 90 HOH HOH . H 4 HOH B 71 271 44 HOH HOH . H 4 HOH B 72 272 14 HOH HOH . H 4 HOH B 73 273 154 HOH HOH . H 4 HOH B 74 274 153 HOH HOH . H 4 HOH B 75 275 70 HOH HOH . H 4 HOH B 76 276 47 HOH HOH . H 4 HOH B 77 277 119 HOH HOH . H 4 HOH B 78 278 150 HOH HOH . H 4 HOH B 79 279 99 HOH HOH . H 4 HOH B 80 280 130 HOH HOH . H 4 HOH B 81 281 25 HOH HOH . H 4 HOH B 82 282 41 HOH HOH . H 4 HOH B 83 283 69 HOH HOH . H 4 HOH B 84 284 86 HOH HOH . H 4 HOH B 85 285 147 HOH HOH . H 4 HOH B 86 286 43 HOH HOH . H 4 HOH B 87 287 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 CKV . . . D 3 -16.059 20.68 -5.214 1 20.74 ? C2 CKV 101 B 1 HETATM 2 C C7 CKV . . . D 3 -18.61 19.387 -7.58 1 29.43 ? C7 CKV 101 B 1 HETATM 3 C C9 CKV . . . D 3 -20.379 17.78 -7.668 1 32.24 ? C9 CKV 101 B 1 HETATM 4 C C10 CKV . . . D 3 -21.043 18.443 -6.65 1 32.13 ? C10 CKV 101 B 1 HETATM 5 C C11 CKV . . . D 3 -20.496 19.582 -6.088 1 30.3 ? C11 CKV 101 B 1 HETATM 6 C C12 CKV . . . D 3 -14.845 22.902 -4.664 1 16.46 ? C12 CKV 101 B 1 HETATM 7 C C13 CKV . . . D 3 -13.938 23.659 -3.714 1 14.86 ? C13 CKV 101 B 1 HETATM 8 C C15 CKV . . . D 3 -12.001 25.039 -3.212 1 19.02 ? C15 CKV 101 B 1 HETATM 9 C C18 CKV . . . D 3 -14.231 23.694 -2.36 1 18.61 ? C18 CKV 101 B 1 HETATM 10 N N19 CKV . . . D 3 -12.405 24.394 -5.497 1 15.18 ? N19 CKV 101 B 1 HETATM 11 C C20 CKV . . . D 3 -11.191 23.913 -5.92 1 14.74 ? C20 CKV 101 B 1 HETATM 12 C C22 CKV . . . D 3 -10.895 24.157 -7.382 1 15.68 ? C22 CKV 101 B 1 HETATM 13 C C8 CKV . . . D 3 -19.165 18.247 -8.133 1 31.72 ? C8 CKV 101 B 1 HETATM 14 C C16 CKV . . . D 3 -12.308 25.043 -1.859 1 19.25 ? C16 CKV 101 B 1 HETATM 15 C C26 CKV . . . D 3 -9.215 21.91 -9.759 1 21.15 ? C26 CKV 101 B 1 HETATM 16 C C30 CKV . . . D 3 -10.43 23.857 -10.43 1 23.68 ? C30 CKV 101 B 1 HETATM 17 C C31 CKV . . . D 3 -12.631 21.045 -8.064 1 15.92 ? C31 CKV 101 B 1 HETATM 18 C C35 CKV . . . D 3 -13.278 23.12 -9.066 1 17.74 ? C35 CKV 101 B 1 HETATM 19 C C17 CKV . . . D 3 -13.435 24.363 -1.454 1 17.7 ? C17 CKV 101 B 1 HETATM 20 C C27 CKV . . . D 3 -8.529 21.94 -10.964 1 24.63 ? C27 CKV 101 B 1 HETATM 21 C C29 CKV . . . D 3 -9.752 23.894 -11.636 1 24.67 ? C29 CKV 101 B 1 HETATM 22 C C32 CKV . . . D 3 -13.894 20.538 -8.309 1 17.14 ? C32 CKV 101 B 1 HETATM 23 C C34 CKV . . . D 3 -14.53 22.621 -9.332 1 19.38 ? C34 CKV 101 B 1 HETATM 24 C C25 CKV . . . D 3 -10.164 22.88 -9.486 1 21.84 ? C25 CKV 101 B 1 HETATM 25 C C24 CKV . . . D 3 -12.322 22.343 -8.43 1 16.56 ? C24 CKV 101 B 1 HETATM 26 C C14 CKV . . . D 3 -12.796 24.354 -4.121 1 17.02 ? C14 CKV 101 B 1 HETATM 27 C C28 CKV . . . D 3 -8.8 22.93 -11.887 1 27.26 ? C28 CKV 101 B 1 HETATM 28 C C33 CKV . . . D 3 -14.825 21.333 -8.946 1 20.69 ? C33 CKV 101 B 1 HETATM 29 C C6 CKV . . . D 3 -19.277 20.033 -6.558 1 28.41 ? C6 CKV 101 B 1 HETATM 30 C C38 CKV . . . D 3 -17.876 20.735 -3.413 1 23.93 ? C38 CKV 101 B 1 HETATM 31 C C1 CKV . . . D 3 -16.024 19.155 -5.082 1 22.88 ? C1 CKV 101 B 1 HETATM 32 C C CKV . . . D 3 -17.953 19.23 -3.408 1 23.75 ? C CKV 101 B 1 HETATM 33 C C39 CKV . . . D 3 -18.227 18.797 -1.989 1 24.67 ? C39 CKV 101 B 1 HETATM 34 C C4 CKV . . . D 3 -14.833 21.363 -4.573 1 18.23 ? C4 CKV 101 B 1 HETATM 35 C C23 CKV . . . D 3 -10.932 22.85 -8.177 1 17.04 ? C23 CKV 101 B 1 HETATM 36 N N3 CKV . . . D 3 -17.311 21.275 -4.681 1 21.61 ? N3 CKV 101 B 1 HETATM 37 N N CKV . . . D 3 -16.609 18.722 -3.777 1 22.99 ? N CKV 101 B 1 HETATM 38 O O21 CKV . . . D 3 -10.395 23.353 -5.188 1 14.35 ? O21 CKV 101 B 1 HETATM 39 O O CKV . . . D 3 -17.883 22.204 -6.924 1 25.81 ? O CKV 101 B 1 HETATM 40 O O5 CKV . . . D 3 -19.671 22.152 -5.134 1 29.1 ? O5 CKV 101 B 1 HETATM 41 F F37 CKV . . . D 3 -8.139 22.973 -13.062 1 30.73 ? F37 CKV 101 B 1 HETATM 42 F F36 CKV . . . D 3 -16.063 20.844 -9.195 1 27.34 ? F36 CKV 101 B 1 HETATM 43 F F CKV . . . D 3 -15.33 23.053 -1.933 1 21.06 ? F CKV 101 B 1 HETATM 44 S S CKV . . . D 3 -18.573 21.513 -5.844 1 26.52 ? S CKV 101 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #