data_6B3T
#
_model_server_result.job_id            crteBGBzcxpta3i2ncuQXg 
_model_server_result.datetime_utc      '2025-01-10 08:12:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b3t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    6B3T 
#
_exptl.entry_id    6B3T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              345.438 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            8-fluoro-5-methyl-3-{[2-(piperidin-1-yl)ethyl]sulfanyl}-5H-[1,2,4]triazino[5,6-b]indole 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6B3T 
_cell.length_a            175.547 
_cell.length_b            175.547 
_cell.length_c            120.722 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B3T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O1A COA . A COA 501 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? 
metalc ? metalc2 B O2A COA . A COA 501 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc3 B O3A COA . A COA 501 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc4 B O5A COA . A COA 501 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
#
_chem_comp.formula           'C17 H20 F N5 S' 
_chem_comp.formula_weight    345.438 
_chem_comp.id                CJ7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              8-fluoro-5-methyl-3-{[2-(piperidin-1-yl)ethyl]sulfanyl}-5H-[1,2,4]triazino[5,6-b]indole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F C4 CJ7 sing 70 n n 
C4 C5 CJ7 doub 71 n y 
C4 C3 CJ7 sing 72 n y 
C5 C6 CJ7 sing 73 n y 
N4 N3 CJ7 doub 74 n y 
N4 C7 CJ7 sing 75 n y 
C3 C2 CJ7 doub 76 n y 
C6 C7 CJ7 sing 77 n y 
C6 C1 CJ7 doub 78 n y 
N3 C9 CJ7 sing 79 n y 
C7 C8 CJ7 doub 80 n y 
C2 C1 CJ7 sing 81 n y 
C1 N CJ7 sing 82 n y 
C9 N1 CJ7 doub 83 n y 
C9 S CJ7 sing 84 n n 
C8 N CJ7 sing 85 n y 
C8 N1 CJ7 sing 86 n y 
N C CJ7 sing 87 n n 
S C10 CJ7 sing 88 n n 
C11 C10 CJ7 sing 89 n n 
C11 N2 CJ7 sing 90 n n 
N2 C12 CJ7 sing 91 n n 
N2 C16 CJ7 sing 92 n n 
C12 C13 CJ7 sing 93 n n 
C16 C15 CJ7 sing 94 n n 
C13 C14 CJ7 sing 95 n n 
C15 C14 CJ7 sing 96 n n 
C5 H1 CJ7 sing 97 n n 
C3 H2 CJ7 sing 98 n n 
C2 H3 CJ7 sing 99 n n 
C H5 CJ7 sing 100 n n 
C H6 CJ7 sing 101 n n 
C H7 CJ7 sing 102 n n 
C10 H8 CJ7 sing 103 n n 
C10 H9 CJ7 sing 104 n n 
C11 H10 CJ7 sing 105 n n 
C11 H11 CJ7 sing 106 n n 
C12 H12 CJ7 sing 107 n n 
C12 H13 CJ7 sing 108 n n 
C13 H14 CJ7 sing 109 n n 
C13 H15 CJ7 sing 110 n n 
C14 H16 CJ7 sing 111 n n 
C14 H17 CJ7 sing 112 n n 
C15 H18 CJ7 sing 113 n n 
C15 H19 CJ7 sing 114 n n 
C16 H20 CJ7 sing 115 n n 
C16 H21 CJ7 sing 116 n n 
#
_atom_sites.entry_id                     6B3T 
_atom_sites.fract_transf_matrix[1][1]    0.005696 
_atom_sites.fract_transf_matrix[1][2]    0.003289 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006578 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008283 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 COA A 1 501 500 COA COA . 
C 3 CJ7 A 1 502 505 CJ7 AS1 . 
D 4 NA A 1 503 1 NA NA . 
E 5 SO4 A 1 504 1 SO4 SO4 . 
F 6 HOH A 1 601 11 HOH HOH . 
F 6 HOH A 2 602 297 HOH HOH . 
F 6 HOH A 3 603 67 HOH HOH . 
F 6 HOH A 4 604 17 HOH HOH . 
F 6 HOH A 5 605 221 HOH HOH . 
F 6 HOH A 6 606 308 HOH HOH . 
F 6 HOH A 7 607 48 HOH HOH . 
F 6 HOH A 8 608 301 HOH HOH . 
F 6 HOH A 9 609 250 HOH HOH . 
F 6 HOH A 10 610 247 HOH HOH . 
F 6 HOH A 11 611 299 HOH HOH . 
F 6 HOH A 12 612 223 HOH HOH . 
F 6 HOH A 13 613 293 HOH HOH . 
F 6 HOH A 14 614 27 HOH HOH . 
F 6 HOH A 15 615 83 HOH HOH . 
F 6 HOH A 16 616 22 HOH HOH . 
F 6 HOH A 17 617 54 HOH HOH . 
F 6 HOH A 18 618 81 HOH HOH . 
F 6 HOH A 19 619 89 HOH HOH . 
F 6 HOH A 20 620 204 HOH HOH . 
F 6 HOH A 21 621 168 HOH HOH . 
F 6 HOH A 22 622 240 HOH HOH . 
F 6 HOH A 23 623 33 HOH HOH . 
F 6 HOH A 24 624 201 HOH HOH . 
F 6 HOH A 25 625 164 HOH HOH . 
F 6 HOH A 26 626 209 HOH HOH . 
F 6 HOH A 27 627 166 HOH HOH . 
F 6 HOH A 28 628 103 HOH HOH . 
F 6 HOH A 29 629 42 HOH HOH . 
F 6 HOH A 30 630 207 HOH HOH . 
F 6 HOH A 31 631 295 HOH HOH . 
F 6 HOH A 32 632 214 HOH HOH . 
F 6 HOH A 33 633 3 HOH HOH . 
F 6 HOH A 34 634 303 HOH HOH . 
F 6 HOH A 35 635 283 HOH HOH . 
F 6 HOH A 36 636 7 HOH HOH . 
F 6 HOH A 37 637 26 HOH HOH . 
F 6 HOH A 38 638 16 HOH HOH . 
F 6 HOH A 39 639 21 HOH HOH . 
F 6 HOH A 40 640 8 HOH HOH . 
F 6 HOH A 41 641 52 HOH HOH . 
F 6 HOH A 42 642 10 HOH HOH . 
F 6 HOH A 43 643 37 HOH HOH . 
F 6 HOH A 44 644 248 HOH HOH . 
F 6 HOH A 45 645 246 HOH HOH . 
F 6 HOH A 46 646 265 HOH HOH . 
F 6 HOH A 47 647 4 HOH HOH . 
F 6 HOH A 48 648 185 HOH HOH . 
F 6 HOH A 49 649 72 HOH HOH . 
F 6 HOH A 50 650 31 HOH HOH . 
F 6 HOH A 51 651 310 HOH HOH . 
F 6 HOH A 52 652 23 HOH HOH . 
F 6 HOH A 53 653 19 HOH HOH . 
F 6 HOH A 54 654 229 HOH HOH . 
F 6 HOH A 55 655 2 HOH HOH . 
F 6 HOH A 56 656 296 HOH HOH . 
F 6 HOH A 57 657 28 HOH HOH . 
F 6 HOH A 58 658 151 HOH HOH . 
F 6 HOH A 59 659 169 HOH HOH . 
F 6 HOH A 60 660 253 HOH HOH . 
F 6 HOH A 61 661 85 HOH HOH . 
F 6 HOH A 62 662 9 HOH HOH . 
F 6 HOH A 63 663 159 HOH HOH . 
F 6 HOH A 64 664 56 HOH HOH . 
F 6 HOH A 65 665 263 HOH HOH . 
F 6 HOH A 66 666 29 HOH HOH . 
F 6 HOH A 67 667 55 HOH HOH . 
F 6 HOH A 68 668 15 HOH HOH . 
F 6 HOH A 69 669 284 HOH HOH . 
F 6 HOH A 70 670 300 HOH HOH . 
F 6 HOH A 71 671 41 HOH HOH . 
F 6 HOH A 72 672 46 HOH HOH . 
F 6 HOH A 73 673 210 HOH HOH . 
F 6 HOH A 74 674 309 HOH HOH . 
F 6 HOH A 75 675 194 HOH HOH . 
F 6 HOH A 76 676 39 HOH HOH . 
F 6 HOH A 77 677 32 HOH HOH . 
F 6 HOH A 78 678 224 HOH HOH . 
F 6 HOH A 79 679 51 HOH HOH . 
F 6 HOH A 80 680 243 HOH HOH . 
F 6 HOH A 81 681 87 HOH HOH . 
F 6 HOH A 82 682 25 HOH HOH . 
F 6 HOH A 83 683 14 HOH HOH . 
F 6 HOH A 84 684 143 HOH HOH . 
F 6 HOH A 85 685 1 HOH HOH . 
F 6 HOH A 86 686 257 HOH HOH . 
F 6 HOH A 87 687 126 HOH HOH . 
F 6 HOH A 88 688 125 HOH HOH . 
F 6 HOH A 89 689 127 HOH HOH . 
F 6 HOH A 90 690 312 HOH HOH . 
F 6 HOH A 91 691 47 HOH HOH . 
F 6 HOH A 92 692 88 HOH HOH . 
F 6 HOH A 93 693 119 HOH HOH . 
F 6 HOH A 94 694 241 HOH HOH . 
F 6 HOH A 95 695 95 HOH HOH . 
F 6 HOH A 96 696 307 HOH HOH . 
F 6 HOH A 97 697 268 HOH HOH . 
F 6 HOH A 98 698 142 HOH HOH . 
F 6 HOH A 99 699 262 HOH HOH . 
F 6 HOH A 100 700 249 HOH HOH . 
F 6 HOH A 101 701 193 HOH HOH . 
F 6 HOH A 102 702 219 HOH HOH . 
F 6 HOH A 103 703 117 HOH HOH . 
F 6 HOH A 104 704 269 HOH HOH . 
F 6 HOH A 105 705 150 HOH HOH . 
F 6 HOH A 106 706 5 HOH HOH . 
F 6 HOH A 107 707 183 HOH HOH . 
F 6 HOH A 108 708 128 HOH HOH . 
F 6 HOH A 109 709 173 HOH HOH . 
F 6 HOH A 110 710 114 HOH HOH . 
F 6 HOH A 111 711 220 HOH HOH . 
F 6 HOH A 112 712 123 HOH HOH . 
F 6 HOH A 113 713 60 HOH HOH . 
F 6 HOH A 114 714 58 HOH HOH . 
F 6 HOH A 115 715 122 HOH HOH . 
F 6 HOH A 116 716 228 HOH HOH . 
F 6 HOH A 117 717 66 HOH HOH . 
F 6 HOH A 118 718 311 HOH HOH . 
F 6 HOH A 119 719 35 HOH HOH . 
F 6 HOH A 120 720 217 HOH HOH . 
F 6 HOH A 121 721 161 HOH HOH . 
F 6 HOH A 122 722 175 HOH HOH . 
F 6 HOH A 123 723 238 HOH HOH . 
F 6 HOH A 124 724 190 HOH HOH . 
F 6 HOH A 125 725 80 HOH HOH . 
F 6 HOH A 126 726 153 HOH HOH . 
F 6 HOH A 127 727 38 HOH HOH . 
F 6 HOH A 128 728 196 HOH HOH . 
F 6 HOH A 129 729 149 HOH HOH . 
F 6 HOH A 130 730 298 HOH HOH . 
F 6 HOH A 131 731 167 HOH HOH . 
F 6 HOH A 132 732 144 HOH HOH . 
F 6 HOH A 133 733 49 HOH HOH . 
F 6 HOH A 134 734 162 HOH HOH . 
F 6 HOH A 135 735 191 HOH HOH . 
F 6 HOH A 136 736 294 HOH HOH . 
F 6 HOH A 137 737 232 HOH HOH . 
F 6 HOH A 138 738 305 HOH HOH . 
F 6 HOH A 139 739 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C5 CJ7 . . . C 3 20.698 -13.996 31.918 1 39.03 ? C5 CJ7 502 A 1 
HETATM 2 C C4 CJ7 . . . C 3 21.921 -14.659 31.805 1 38.83 ? C4 CJ7 502 A 1 
HETATM 3 N N4 CJ7 . . . C 3 18.18 -12.211 32.733 1 40.7 ? N4 CJ7 502 A 1 
HETATM 4 C C3 CJ7 . . . C 3 22.922 -14.436 32.756 1 38.7 ? C3 CJ7 502 A 1 
HETATM 5 C C2 CJ7 . . . C 3 22.72 -13.558 33.828 1 38.96 ? C2 CJ7 502 A 1 
HETATM 6 C C1 CJ7 . . . C 3 21.498 -12.893 33.952 1 39.39 ? C1 CJ7 502 A 1 
HETATM 7 N N2 CJ7 . . . C 3 18.435 -7.692 38.017 1 49.36 ? N2 CJ7 502 A 1 
HETATM 8 C C CJ7 . . . C 3 21.655 -11.443 36.027 1 39.85 ? C CJ7 502 A 1 
HETATM 9 N N3 CJ7 . . . C 3 17.247 -11.335 33.316 1 41.62 ? N3 CJ7 502 A 1 
HETATM 10 N N1 CJ7 . . . C 3 18.779 -10.801 35.038 1 41.05 ? N1 CJ7 502 A 1 
HETATM 11 F F CJ7 . . . C 3 22.146 -15.509 30.788 1 38.74 ? F CJ7 502 A 1 
HETATM 12 C C6 CJ7 . . . C 3 20.528 -13.136 32.998 1 39.53 ? C6 CJ7 502 A 1 
HETATM 13 C C7 CJ7 . . . C 3 19.378 -12.324 33.349 1 40.23 ? C7 CJ7 502 A 1 
HETATM 14 C C8 CJ7 . . . C 3 19.699 -11.636 34.497 1 40.17 ? C8 CJ7 502 A 1 
HETATM 15 N N CJ7 . . . C 3 20.966 -11.993 34.833 1 39.79 ? N CJ7 502 A 1 
HETATM 16 C C9 CJ7 . . . C 3 17.563 -10.653 34.451 1 42.19 ? C9 CJ7 502 A 1 
HETATM 17 S S CJ7 . . . C 3 16.433 -9.602 35.143 1 43.99 ? S CJ7 502 A 1 
HETATM 18 C C10 CJ7 . . . C 3 16.994 -9.11 36.737 1 46.27 ? C10 CJ7 502 A 1 
HETATM 19 C C11 CJ7 . . . C 3 17.981 -7.955 36.637 1 47.58 ? C11 CJ7 502 A 1 
HETATM 20 C C12 CJ7 . . . C 3 19.877 -7.944 38.193 1 49.95 ? C12 CJ7 502 A 1 
HETATM 21 C C13 CJ7 . . . C 3 20.159 -8.011 39.689 1 50.13 ? C13 CJ7 502 A 1 
HETATM 22 C C14 CJ7 . . . C 3 19.721 -6.73 40.397 1 50.23 ? C14 CJ7 502 A 1 
HETATM 23 C C15 CJ7 . . . C 3 18.321 -6.26 39.999 1 50.24 ? C15 CJ7 502 A 1 
HETATM 24 C C16 CJ7 . . . C 3 18.08 -6.342 38.492 1 50.01 ? C16 CJ7 502 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           24 
#