data_6B5T # _model_server_result.job_id 7KXoDFHQYHYa0Cqlm642lg _model_server_result.datetime_utc '2024-10-17 17:39:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6b5t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6B5T # _exptl.entry_id 6B5T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 18.038 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AMMONIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6B5T _cell.length_a 41.58 _cell.length_b 70.664 _cell.length_c 163.363 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6B5T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf2 B SG CYS 146 H CYS 140 1_555 B SG CYS 202 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 C SG CYS 22 L CYS 23 1_555 C SG CYS 90 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 C SG CYS 138 L CYS 135 1_555 C SG CYS 197 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? covale ? covale1 B C PCA 1 H PCA 1 1_555 B N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'H4 N 1' _chem_comp.formula_weight 18.038 _chem_comp.id NH4 _chem_comp.mon_nstd_flag . _chem_comp.name 'AMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6B5T _atom_sites.fract_transf_matrix[1][1] 0.02405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014151 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006121 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NH4 L 1 301 1 NH4 NH4 . E 5 HOH A 1 101 190 HOH HOH . E 5 HOH A 2 102 43 HOH HOH . E 5 HOH A 3 103 19 HOH HOH . E 5 HOH A 4 104 78 HOH HOH . E 5 HOH A 5 105 8 HOH HOH . E 5 HOH A 6 106 71 HOH HOH . E 5 HOH A 7 107 54 HOH HOH . E 5 HOH A 8 108 247 HOH HOH . E 5 HOH A 9 109 32 HOH HOH . E 5 HOH A 10 110 154 HOH HOH . E 5 HOH A 11 111 259 HOH HOH . E 5 HOH A 12 112 99 HOH HOH . E 5 HOH A 13 113 258 HOH HOH . E 5 HOH A 14 114 189 HOH HOH . E 5 HOH A 15 115 200 HOH HOH . F 5 HOH H 1 301 228 HOH HOH . F 5 HOH H 2 302 250 HOH HOH . F 5 HOH H 3 303 3 HOH HOH . F 5 HOH H 4 304 102 HOH HOH . F 5 HOH H 5 305 194 HOH HOH . F 5 HOH H 6 306 143 HOH HOH . F 5 HOH H 7 307 149 HOH HOH . F 5 HOH H 8 308 221 HOH HOH . F 5 HOH H 9 309 12 HOH HOH . F 5 HOH H 10 310 27 HOH HOH . F 5 HOH H 11 311 10 HOH HOH . F 5 HOH H 12 312 132 HOH HOH . F 5 HOH H 13 313 89 HOH HOH . F 5 HOH H 14 314 40 HOH HOH . F 5 HOH H 15 315 214 HOH HOH . F 5 HOH H 16 316 25 HOH HOH . F 5 HOH H 17 317 94 HOH HOH . F 5 HOH H 18 318 178 HOH HOH . F 5 HOH H 19 319 53 HOH HOH . F 5 HOH H 20 320 70 HOH HOH . F 5 HOH H 21 321 87 HOH HOH . F 5 HOH H 22 322 177 HOH HOH . F 5 HOH H 23 323 108 HOH HOH . F 5 HOH H 24 324 5 HOH HOH . F 5 HOH H 25 325 49 HOH HOH . F 5 HOH H 26 326 150 HOH HOH . F 5 HOH H 27 327 18 HOH HOH . F 5 HOH H 28 328 116 HOH HOH . F 5 HOH H 29 329 7 HOH HOH . F 5 HOH H 30 330 82 HOH HOH . F 5 HOH H 31 331 155 HOH HOH . F 5 HOH H 32 332 191 HOH HOH . F 5 HOH H 33 333 163 HOH HOH . F 5 HOH H 34 334 85 HOH HOH . F 5 HOH H 35 335 127 HOH HOH . F 5 HOH H 36 336 151 HOH HOH . F 5 HOH H 37 337 115 HOH HOH . F 5 HOH H 38 338 4 HOH HOH . F 5 HOH H 39 339 36 HOH HOH . F 5 HOH H 40 340 131 HOH HOH . F 5 HOH H 41 341 106 HOH HOH . F 5 HOH H 42 342 24 HOH HOH . F 5 HOH H 43 343 220 HOH HOH . F 5 HOH H 44 344 58 HOH HOH . F 5 HOH H 45 345 233 HOH HOH . F 5 HOH H 46 346 65 HOH HOH . F 5 HOH H 47 347 166 HOH HOH . F 5 HOH H 48 348 2 HOH HOH . F 5 HOH H 49 349 141 HOH HOH . F 5 HOH H 50 350 77 HOH HOH . F 5 HOH H 51 351 193 HOH HOH . F 5 HOH H 52 352 74 HOH HOH . F 5 HOH H 53 353 39 HOH HOH . F 5 HOH H 54 354 57 HOH HOH . F 5 HOH H 55 355 144 HOH HOH . F 5 HOH H 56 356 148 HOH HOH . F 5 HOH H 57 357 159 HOH HOH . F 5 HOH H 58 358 23 HOH HOH . F 5 HOH H 59 359 197 HOH HOH . F 5 HOH H 60 360 61 HOH HOH . F 5 HOH H 61 361 124 HOH HOH . F 5 HOH H 62 362 92 HOH HOH . F 5 HOH H 63 363 51 HOH HOH . F 5 HOH H 64 364 81 HOH HOH . F 5 HOH H 65 365 90 HOH HOH . F 5 HOH H 66 366 80 HOH HOH . F 5 HOH H 67 367 138 HOH HOH . F 5 HOH H 68 368 44 HOH HOH . F 5 HOH H 69 369 37 HOH HOH . F 5 HOH H 70 370 129 HOH HOH . F 5 HOH H 71 371 84 HOH HOH . F 5 HOH H 72 372 55 HOH HOH . F 5 HOH H 73 373 140 HOH HOH . F 5 HOH H 74 374 262 HOH HOH . F 5 HOH H 75 375 212 HOH HOH . F 5 HOH H 76 376 93 HOH HOH . F 5 HOH H 77 377 110 HOH HOH . F 5 HOH H 78 378 244 HOH HOH . F 5 HOH H 79 379 66 HOH HOH . F 5 HOH H 80 380 152 HOH HOH . F 5 HOH H 81 381 222 HOH HOH . F 5 HOH H 82 382 176 HOH HOH . F 5 HOH H 83 383 199 HOH HOH . F 5 HOH H 84 384 224 HOH HOH . F 5 HOH H 85 385 97 HOH HOH . F 5 HOH H 86 386 256 HOH HOH . F 5 HOH H 87 387 109 HOH HOH . F 5 HOH H 88 388 164 HOH HOH . F 5 HOH H 89 389 255 HOH HOH . F 5 HOH H 90 390 113 HOH HOH . F 5 HOH H 91 391 204 HOH HOH . F 5 HOH H 92 392 125 HOH HOH . F 5 HOH H 93 393 223 HOH HOH . F 5 HOH H 94 394 234 HOH HOH . F 5 HOH H 95 395 157 HOH HOH . F 5 HOH H 96 396 135 HOH HOH . F 5 HOH H 97 397 64 HOH HOH . F 5 HOH H 98 398 236 HOH HOH . F 5 HOH H 99 399 95 HOH HOH . F 5 HOH H 100 400 218 HOH HOH . F 5 HOH H 101 401 142 HOH HOH . F 5 HOH H 102 402 252 HOH HOH . F 5 HOH H 103 403 100 HOH HOH . F 5 HOH H 104 404 122 HOH HOH . F 5 HOH H 105 405 173 HOH HOH . F 5 HOH H 106 406 188 HOH HOH . F 5 HOH H 107 407 139 HOH HOH . F 5 HOH H 108 408 42 HOH HOH . F 5 HOH H 109 409 184 HOH HOH . F 5 HOH H 110 410 171 HOH HOH . F 5 HOH H 111 411 118 HOH HOH . F 5 HOH H 112 412 257 HOH HOH . F 5 HOH H 113 413 198 HOH HOH . F 5 HOH H 114 414 185 HOH HOH . F 5 HOH H 115 415 208 HOH HOH . F 5 HOH H 116 416 179 HOH HOH . F 5 HOH H 117 417 133 HOH HOH . F 5 HOH H 118 418 196 HOH HOH . F 5 HOH H 119 419 219 HOH HOH . F 5 HOH H 120 420 120 HOH HOH . F 5 HOH H 121 421 146 HOH HOH . F 5 HOH H 122 422 235 HOH HOH . F 5 HOH H 123 423 121 HOH HOH . F 5 HOH H 124 424 213 HOH HOH . F 5 HOH H 125 425 72 HOH HOH . F 5 HOH H 126 426 175 HOH HOH . F 5 HOH H 127 427 210 HOH HOH . F 5 HOH H 128 428 156 HOH HOH . F 5 HOH H 129 429 134 HOH HOH . F 5 HOH H 130 430 201 HOH HOH . F 5 HOH H 131 431 205 HOH HOH . F 5 HOH H 132 432 266 HOH HOH . F 5 HOH H 133 433 267 HOH HOH . G 5 HOH L 1 401 181 HOH HOH . G 5 HOH L 2 402 254 HOH HOH . G 5 HOH L 3 403 162 HOH HOH . G 5 HOH L 4 404 229 HOH HOH . G 5 HOH L 5 405 48 HOH HOH . G 5 HOH L 6 406 183 HOH HOH . G 5 HOH L 7 407 238 HOH HOH . G 5 HOH L 8 408 1 HOH HOH . G 5 HOH L 9 409 47 HOH HOH . G 5 HOH L 10 410 76 HOH HOH . G 5 HOH L 11 411 35 HOH HOH . G 5 HOH L 12 412 111 HOH HOH . G 5 HOH L 13 413 245 HOH HOH . G 5 HOH L 14 414 79 HOH HOH . G 5 HOH L 15 415 30 HOH HOH . G 5 HOH L 16 416 69 HOH HOH . G 5 HOH L 17 417 31 HOH HOH . G 5 HOH L 18 418 33 HOH HOH . G 5 HOH L 19 419 15 HOH HOH . G 5 HOH L 20 420 192 HOH HOH . G 5 HOH L 21 421 172 HOH HOH . G 5 HOH L 22 422 88 HOH HOH . G 5 HOH L 23 423 86 HOH HOH . G 5 HOH L 24 424 167 HOH HOH . G 5 HOH L 25 425 26 HOH HOH . G 5 HOH L 26 426 22 HOH HOH . G 5 HOH L 27 427 11 HOH HOH . G 5 HOH L 28 428 13 HOH HOH . G 5 HOH L 29 429 62 HOH HOH . G 5 HOH L 30 430 29 HOH HOH . G 5 HOH L 31 431 73 HOH HOH . G 5 HOH L 32 432 105 HOH HOH . G 5 HOH L 33 433 14 HOH HOH . G 5 HOH L 34 434 34 HOH HOH . G 5 HOH L 35 435 63 HOH HOH . G 5 HOH L 36 436 67 HOH HOH . G 5 HOH L 37 437 28 HOH HOH . G 5 HOH L 38 438 165 HOH HOH . G 5 HOH L 39 439 119 HOH HOH . G 5 HOH L 40 440 56 HOH HOH . G 5 HOH L 41 441 195 HOH HOH . G 5 HOH L 42 442 9 HOH HOH . G 5 HOH L 43 443 83 HOH HOH . G 5 HOH L 44 444 103 HOH HOH . G 5 HOH L 45 445 68 HOH HOH . G 5 HOH L 46 446 161 HOH HOH . G 5 HOH L 47 447 107 HOH HOH . G 5 HOH L 48 448 242 HOH HOH . G 5 HOH L 49 449 147 HOH HOH . G 5 HOH L 50 450 6 HOH HOH . G 5 HOH L 51 451 211 HOH HOH . G 5 HOH L 52 452 187 HOH HOH . G 5 HOH L 53 453 186 HOH HOH . G 5 HOH L 54 454 20 HOH HOH . G 5 HOH L 55 455 101 HOH HOH . G 5 HOH L 56 456 174 HOH HOH . G 5 HOH L 57 457 239 HOH HOH . G 5 HOH L 58 458 17 HOH HOH . G 5 HOH L 59 459 241 HOH HOH . G 5 HOH L 60 460 59 HOH HOH . G 5 HOH L 61 461 45 HOH HOH . G 5 HOH L 62 462 128 HOH HOH . G 5 HOH L 63 463 16 HOH HOH . G 5 HOH L 64 464 50 HOH HOH . G 5 HOH L 65 465 41 HOH HOH . G 5 HOH L 66 466 137 HOH HOH . G 5 HOH L 67 467 240 HOH HOH . G 5 HOH L 68 468 263 HOH HOH . G 5 HOH L 69 469 207 HOH HOH . G 5 HOH L 70 470 114 HOH HOH . G 5 HOH L 71 471 169 HOH HOH . G 5 HOH L 72 472 232 HOH HOH . G 5 HOH L 73 473 158 HOH HOH . G 5 HOH L 74 474 104 HOH HOH . G 5 HOH L 75 475 209 HOH HOH . G 5 HOH L 76 476 225 HOH HOH . G 5 HOH L 77 477 96 HOH HOH . G 5 HOH L 78 478 38 HOH HOH . G 5 HOH L 79 479 202 HOH HOH . G 5 HOH L 80 480 75 HOH HOH . G 5 HOH L 81 481 91 HOH HOH . G 5 HOH L 82 482 60 HOH HOH . G 5 HOH L 83 483 98 HOH HOH . G 5 HOH L 84 484 180 HOH HOH . G 5 HOH L 85 485 21 HOH HOH . G 5 HOH L 86 486 123 HOH HOH . G 5 HOH L 87 487 237 HOH HOH . G 5 HOH L 88 488 52 HOH HOH . G 5 HOH L 89 489 249 HOH HOH . G 5 HOH L 90 490 215 HOH HOH . G 5 HOH L 91 491 153 HOH HOH . G 5 HOH L 92 492 130 HOH HOH . G 5 HOH L 93 493 217 HOH HOH . G 5 HOH L 94 494 206 HOH HOH . G 5 HOH L 95 495 136 HOH HOH . G 5 HOH L 96 496 112 HOH HOH . G 5 HOH L 97 497 126 HOH HOH . G 5 HOH L 98 498 230 HOH HOH . G 5 HOH L 99 499 182 HOH HOH . G 5 HOH L 100 500 226 HOH HOH . G 5 HOH L 101 501 227 HOH HOH . G 5 HOH L 102 502 168 HOH HOH . G 5 HOH L 103 503 264 HOH HOH . G 5 HOH L 104 504 160 HOH HOH . G 5 HOH L 105 505 231 HOH HOH . G 5 HOH L 106 506 251 HOH HOH . G 5 HOH L 107 507 261 HOH HOH . G 5 HOH L 108 508 243 HOH HOH . G 5 HOH L 109 509 203 HOH HOH . G 5 HOH L 110 510 145 HOH HOH . G 5 HOH L 111 511 248 HOH HOH . G 5 HOH L 112 512 117 HOH HOH . G 5 HOH L 113 513 216 HOH HOH . G 5 HOH L 114 514 170 HOH HOH . G 5 HOH L 115 515 46 HOH HOH . G 5 HOH L 116 516 253 HOH HOH . G 5 HOH L 117 517 260 HOH HOH . G 5 HOH L 118 518 246 HOH HOH . G 5 HOH L 119 519 265 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NH4 . . . D 4 9.68 -8.814 -13.814 1 18.59 ? N NH4 301 L 1 HETATM 2 H HN1 NH4 . . . D 4 9.164 -9.624 -14.011 1 22.31 ? HN1 NH4 301 L 1 HETATM 3 H HN2 NH4 . . . D 4 10.193 -8.552 -14.607 1 22.31 ? HN2 NH4 301 L 1 HETATM 4 H HN3 NH4 . . . D 4 9.069 -8.089 -13.566 1 22.31 ? HN3 NH4 301 L 1 HETATM 5 H HN4 NH4 . . . D 4 10.295 -8.992 -13.072 1 22.31 ? HN4 NH4 301 L 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #