data_6B5Y
#
_model_server_result.job_id            ghD2v8_pG0bo7egqk0pP2A 
_model_server_result.datetime_utc      '2024-11-05 14:35:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6b5y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":400}' 
#
_entry.id    6B5Y 
#
_exptl.entry_id    6B5Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              554.58 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Ceftriaxone 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.68 
_cell.angle_gamma         90 
_cell.entry_id            6B5Y 
_cell.length_a            78.53 
_cell.length_b            96.03 
_cell.length_c            112.58 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6B5Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,K 1 1 
B,G,L 2 1 
C,H,I,M 3 1 
D,J,N 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C18 H18 N8 O7 S3' 
_chem_comp.formula_weight    554.58 
_chem_comp.id                9F2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Ceftriaxone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N7 C17 9F2 sing 1 n n 
C17 N8 9F2 doub 2 n y 
C17 S3 9F2 sing 3 n y 
N8 C15 9F2 sing 4 n y 
S3 C16 9F2 sing 5 n y 
C15 C16 9F2 doub 6 n y 
C15 C13 9F2 sing 7 n n 
N5 C11 9F2 sing 8 n n 
N5 C12 9F2 sing 9 n n 
O3 C10 9F2 doub 10 n n 
C14 O5 9F2 sing 11 n n 
C13 N6 9F2 doub 12 e n 
C13 C12 9F2 sing 13 n n 
C11 C10 9F2 sing 14 n n 
C11 C1 9F2 sing 15 n n 
N6 O5 9F2 sing 16 n n 
C12 O4 9F2 doub 17 n n 
C10 N4 9F2 sing 18 n n 
O6 C18 9F2 doub 19 n n 
C1 N4 9F2 sing 20 n n 
C1 S1 9F2 sing 21 n n 
N4 C9 9F2 sing 22 n n 
C18 C9 9F2 sing 23 n n 
C18 O7 9F2 sing 24 n n 
C9 C3 9F2 doub 25 n n 
S1 C2 9F2 sing 26 n n 
C3 C2 9F2 sing 27 n n 
C3 C4 9F2 sing 28 n n 
C4 S2 9F2 sing 29 n n 
S2 C5 9F2 sing 30 n n 
C5 N1 9F2 doub 31 n n 
C5 N3 9F2 sing 32 n n 
N1 C6 9F2 sing 33 n n 
C8 N3 9F2 sing 34 n n 
N3 N2 9F2 sing 35 n n 
C6 O1 9F2 doub 36 n n 
C6 C7 9F2 sing 37 n n 
N2 C7 9F2 sing 38 n n 
C7 O2 9F2 doub 39 n n 
C1 H1 9F2 sing 40 n n 
C2 H2 9F2 sing 41 n n 
C2 H3 9F2 sing 42 n n 
C4 H5 9F2 sing 43 n n 
C4 H6 9F2 sing 44 n n 
N2 H7 9F2 sing 45 n n 
C8 H8 9F2 sing 46 n n 
C8 H9 9F2 sing 47 n n 
C8 H10 9F2 sing 48 n n 
C11 H12 9F2 sing 49 n n 
N5 H13 9F2 sing 50 n n 
C14 H14 9F2 sing 51 n n 
C14 H15 9F2 sing 52 n n 
C14 H16 9F2 sing 53 n n 
C16 H18 9F2 sing 54 n n 
N7 H21 9F2 sing 55 n n 
N7 H22 9F2 sing 56 n n 
O7 H26 9F2 sing 57 n n 
#
_atom_sites.entry_id                     6B5Y 
_atom_sites.fract_transf_matrix[1][1]    0.012734 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004554 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010413 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009434 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PO4 A 1 301 6 PO4 PO4 . 
F 3 9F2 A 1 302 1 9F2 CEF . 
G 3 9F2 B 1 400 400 9F2 CEF . 
H 2 PO4 C 1 301 5 PO4 PO4 . 
I 3 9F2 C 1 302 3 9F2 CEF . 
J 3 9F2 D 1 400 400 9F2 CEF . 
K 4 HOH A 1 401 112 HOH HOH . 
K 4 HOH A 2 402 76 HOH HOH . 
K 4 HOH A 3 403 128 HOH HOH . 
K 4 HOH A 4 404 85 HOH HOH . 
K 4 HOH A 5 405 91 HOH HOH . 
K 4 HOH A 6 406 101 HOH HOH . 
K 4 HOH A 7 407 140 HOH HOH . 
K 4 HOH A 8 408 4 HOH HOH . 
K 4 HOH A 9 409 5 HOH HOH . 
K 4 HOH A 10 410 38 HOH HOH . 
K 4 HOH A 11 411 15 HOH HOH . 
K 4 HOH A 12 412 8 HOH HOH . 
K 4 HOH A 13 413 117 HOH HOH . 
K 4 HOH A 14 414 71 HOH HOH . 
K 4 HOH A 15 415 48 HOH HOH . 
K 4 HOH A 16 416 6 HOH HOH . 
K 4 HOH A 17 417 115 HOH HOH . 
K 4 HOH A 18 418 51 HOH HOH . 
K 4 HOH A 19 419 135 HOH HOH . 
K 4 HOH A 20 420 19 HOH HOH . 
K 4 HOH A 21 421 28 HOH HOH . 
K 4 HOH A 22 422 21 HOH HOH . 
K 4 HOH A 23 423 52 HOH HOH . 
K 4 HOH A 24 424 30 HOH HOH . 
K 4 HOH A 25 425 110 HOH HOH . 
K 4 HOH A 26 426 27 HOH HOH . 
K 4 HOH A 27 427 42 HOH HOH . 
K 4 HOH A 28 428 119 HOH HOH . 
K 4 HOH A 29 429 127 HOH HOH . 
K 4 HOH A 30 430 64 HOH HOH . 
K 4 HOH A 31 431 12 HOH HOH . 
K 4 HOH A 32 432 22 HOH HOH . 
L 4 HOH B 1 501 53 HOH HOH . 
L 4 HOH B 2 502 33 HOH HOH . 
L 4 HOH B 3 503 17 HOH HOH . 
L 4 HOH B 4 504 25 HOH HOH . 
L 4 HOH B 5 505 118 HOH HOH . 
L 4 HOH B 6 506 142 HOH HOH . 
L 4 HOH B 7 507 10 HOH HOH . 
L 4 HOH B 8 508 37 HOH HOH . 
L 4 HOH B 9 509 35 HOH HOH . 
L 4 HOH B 10 510 40 HOH HOH . 
L 4 HOH B 11 511 116 HOH HOH . 
L 4 HOH B 12 512 7 HOH HOH . 
L 4 HOH B 13 513 41 HOH HOH . 
L 4 HOH B 14 514 32 HOH HOH . 
L 4 HOH B 15 515 133 HOH HOH . 
L 4 HOH B 16 516 86 HOH HOH . 
L 4 HOH B 17 517 73 HOH HOH . 
L 4 HOH B 18 518 55 HOH HOH . 
L 4 HOH B 19 519 95 HOH HOH . 
L 4 HOH B 20 520 34 HOH HOH . 
L 4 HOH B 21 521 98 HOH HOH . 
L 4 HOH B 22 522 26 HOH HOH . 
L 4 HOH B 23 523 134 HOH HOH . 
L 4 HOH B 24 524 59 HOH HOH . 
L 4 HOH B 25 525 43 HOH HOH . 
L 4 HOH B 26 526 141 HOH HOH . 
L 4 HOH B 27 527 54 HOH HOH . 
L 4 HOH B 28 528 20 HOH HOH . 
L 4 HOH B 29 529 24 HOH HOH . 
L 4 HOH B 30 530 114 HOH HOH . 
L 4 HOH B 31 531 102 HOH HOH . 
M 4 HOH C 1 401 88 HOH HOH . 
M 4 HOH C 2 402 50 HOH HOH . 
M 4 HOH C 3 403 56 HOH HOH . 
M 4 HOH C 4 404 74 HOH HOH . 
M 4 HOH C 5 405 66 HOH HOH . 
M 4 HOH C 6 406 136 HOH HOH . 
M 4 HOH C 7 407 11 HOH HOH . 
M 4 HOH C 8 408 45 HOH HOH . 
M 4 HOH C 9 409 14 HOH HOH . 
M 4 HOH C 10 410 82 HOH HOH . 
M 4 HOH C 11 411 68 HOH HOH . 
M 4 HOH C 12 412 124 HOH HOH . 
M 4 HOH C 13 413 31 HOH HOH . 
M 4 HOH C 14 414 49 HOH HOH . 
M 4 HOH C 15 415 65 HOH HOH . 
M 4 HOH C 16 416 78 HOH HOH . 
M 4 HOH C 17 417 29 HOH HOH . 
M 4 HOH C 18 418 138 HOH HOH . 
M 4 HOH C 19 419 23 HOH HOH . 
M 4 HOH C 20 420 47 HOH HOH . 
M 4 HOH C 21 421 57 HOH HOH . 
M 4 HOH C 22 422 61 HOH HOH . 
M 4 HOH C 23 423 67 HOH HOH . 
M 4 HOH C 24 424 84 HOH HOH . 
M 4 HOH C 25 425 97 HOH HOH . 
M 4 HOH C 26 426 107 HOH HOH . 
M 4 HOH C 27 427 58 HOH HOH . 
M 4 HOH C 28 428 46 HOH HOH . 
M 4 HOH C 29 429 81 HOH HOH . 
M 4 HOH C 30 430 106 HOH HOH . 
M 4 HOH C 31 431 100 HOH HOH . 
M 4 HOH C 32 432 104 HOH HOH . 
M 4 HOH C 33 433 123 HOH HOH . 
M 4 HOH C 34 434 92 HOH HOH . 
M 4 HOH C 35 435 111 HOH HOH . 
M 4 HOH C 36 436 60 HOH HOH . 
M 4 HOH C 37 437 39 HOH HOH . 
M 4 HOH C 38 438 63 HOH HOH . 
M 4 HOH C 39 439 105 HOH HOH . 
M 4 HOH C 40 440 62 HOH HOH . 
M 4 HOH C 41 441 122 HOH HOH . 
M 4 HOH C 42 442 108 HOH HOH . 
M 4 HOH C 43 443 109 HOH HOH . 
M 4 HOH C 44 444 99 HOH HOH . 
M 4 HOH C 45 445 143 HOH HOH . 
M 4 HOH C 46 446 139 HOH HOH . 
M 4 HOH C 47 447 132 HOH HOH . 
M 4 HOH C 48 448 130 HOH HOH . 
M 4 HOH C 49 449 113 HOH HOH . 
N 4 HOH D 1 501 80 HOH HOH . 
N 4 HOH D 2 502 93 HOH HOH . 
N 4 HOH D 3 503 36 HOH HOH . 
N 4 HOH D 4 504 126 HOH HOH . 
N 4 HOH D 5 505 1 HOH HOH . 
N 4 HOH D 6 506 129 HOH HOH . 
N 4 HOH D 7 507 72 HOH HOH . 
N 4 HOH D 8 508 3 HOH HOH . 
N 4 HOH D 9 509 13 HOH HOH . 
N 4 HOH D 10 510 121 HOH HOH . 
N 4 HOH D 11 511 69 HOH HOH . 
N 4 HOH D 12 512 83 HOH HOH . 
N 4 HOH D 13 513 2 HOH HOH . 
N 4 HOH D 14 514 44 HOH HOH . 
N 4 HOH D 15 515 9 HOH HOH . 
N 4 HOH D 16 516 90 HOH HOH . 
N 4 HOH D 17 517 137 HOH HOH . 
N 4 HOH D 18 518 125 HOH HOH . 
N 4 HOH D 19 519 77 HOH HOH . 
N 4 HOH D 20 520 16 HOH HOH . 
N 4 HOH D 21 521 18 HOH HOH . 
N 4 HOH D 22 522 103 HOH HOH . 
N 4 HOH D 23 523 131 HOH HOH . 
N 4 HOH D 24 524 87 HOH HOH . 
N 4 HOH D 25 525 96 HOH HOH . 
N 4 HOH D 26 526 89 HOH HOH . 
N 4 HOH D 27 527 94 HOH HOH . 
N 4 HOH D 28 528 120 HOH HOH . 
N 4 HOH D 29 529 75 HOH HOH . 
N 4 HOH D 30 530 70 HOH HOH . 
N 4 HOH D 31 531 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9F2 . A . J 3 18.146 -38.021 16.452 0.92 56.56 ? C1 9F2 400 D 1 
HETATM 2 S S1 9F2 . A . J 3 19.441 -37.57 17.553 0.92 68.99 ? S1 9F2 400 D 1 
HETATM 3 C C2 9F2 . A . J 3 19.014 -35.88 17.853 0.92 71.94 ? C2 9F2 400 D 1 
HETATM 4 C C3 9F2 . A . J 3 18.925 -35.142 16.523 0.92 67.74 ? C3 9F2 400 D 1 
HETATM 5 C C4 9F2 . A . J 3 19.636 -33.799 16.418 0.92 66.09 ? C4 9F2 400 D 1 
HETATM 6 S S2 9F2 . A . J 3 19.298 -32.763 17.81 0.92 93.46 ? S2 9F2 400 D 1 
HETATM 7 C C5 9F2 . A . J 3 20.714 -32.153 18.559 0.92 99.64 ? C5 9F2 400 D 1 
HETATM 8 N N1 9F2 . A . J 3 21.404 -32.906 19.464 0.92 100.59 ? N1 9F2 400 D 1 
HETATM 9 C C6 9F2 . A . J 3 22.529 -32.431 20.074 0.92 92.57 ? C6 9F2 400 D 1 
HETATM 10 O O1 9F2 . A . J 3 23.151 -33.135 20.9 0.92 82.06 ? O1 9F2 400 D 1 
HETATM 11 C C7 9F2 . A . J 3 23.01 -31.16 19.786 0.92 97.09 ? C7 9F2 400 D 1 
HETATM 12 O O2 9F2 . A . J 3 24.043 -30.741 20.356 0.92 79.79 ? O2 9F2 400 D 1 
HETATM 13 N N2 9F2 . A . J 3 22.364 -30.377 18.903 0.92 103.53 ? N2 9F2 400 D 1 
HETATM 14 N N3 9F2 . A . J 3 21.201 -30.848 18.267 0.92 92.96 ? N3 9F2 400 D 1 
HETATM 15 C C8 9F2 . A . J 3 20.525 -29.979 17.315 0.92 62.82 ? C8 9F2 400 D 1 
HETATM 16 C C9 9F2 . A . J 3 18.302 -35.697 15.453 0.92 50.91 ? C9 9F2 400 D 1 
HETATM 17 N N4 9F2 . A . J 3 18.238 -37.019 15.379 0.92 47.14 ? N4 9F2 400 D 1 
HETATM 18 C C10 9F2 . A . J 3 18.453 -37.81 14.328 0.92 59.18 ? C10 9F2 400 D 1 
HETATM 19 O O3 9F2 . A . J 3 18.574 -37.699 13.102 0.92 52.37 ? O3 9F2 400 D 1 
HETATM 20 C C11 9F2 . A . J 3 18.562 -38.936 15.3 0.92 59.34 ? C11 9F2 400 D 1 
HETATM 21 N N5 9F2 . A . J 3 19.818 -39.663 15.398 0.92 52.55 ? N5 9F2 400 D 1 
HETATM 22 C C12 9F2 . A . J 3 20.045 -40.846 15.934 0.92 58.28 ? C12 9F2 400 D 1 
HETATM 23 O O4 9F2 . A . J 3 19.162 -41.466 16.519 0.92 64.48 ? O4 9F2 400 D 1 
HETATM 24 C C13 9F2 . A . J 3 21.427 -41.345 15.786 0.92 59.79 ? C13 9F2 400 D 1 
HETATM 25 N N6 9F2 . A . J 3 21.664 -42.561 15.552 0.92 65.62 ? N6 9F2 400 D 1 
HETATM 26 O O5 9F2 . A . J 3 20.789 -43.459 15.47 0.92 65.31 ? O5 9F2 400 D 1 
HETATM 27 C C14 9F2 . A . J 3 21.148 -44.753 15.972 0.92 61.31 ? C14 9F2 400 D 1 
HETATM 28 C C15 9F2 . A . J 3 22.611 -40.438 15.864 0.92 59.95 ? C15 9F2 400 D 1 
HETATM 29 C C16 9F2 . A . J 3 22.553 -39.148 16.417 0.92 68.52 ? C16 9F2 400 D 1 
HETATM 30 S S3 9F2 . A . J 3 24.138 -38.442 16.326 0.92 77.64 ? S3 9F2 400 D 1 
HETATM 31 C C17 9F2 . A . J 3 24.805 -39.838 15.587 0.92 67.86 ? C17 9F2 400 D 1 
HETATM 32 N N7 9F2 . A . J 3 26.118 -39.925 15.227 0.92 63.11 ? N7 9F2 400 D 1 
HETATM 33 N N8 9F2 . A . J 3 23.866 -40.807 15.418 0.92 66.66 ? N8 9F2 400 D 1 
HETATM 34 C C18 9F2 . A . J 3 17.843 -34.945 14.289 0.92 55.22 ? C18 9F2 400 D 1 
HETATM 35 O O6 9F2 . A . J 3 18.746 -34.414 13.599 0.92 53.44 ? O6 9F2 400 D 1 
HETATM 36 O O7 9F2 . A . J 3 16.613 -34.866 13.988 0.92 53.26 ? O7 9F2 400 D 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           227 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           36 
#